FC871454

Overview
NameFC871454
Unique NameFC871454
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length468
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6895 contig Csv1_Contig6895:1..468. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC871454 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.716e-11
Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 2 
Query:    2 ADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQVSNEGD 187
            ADS++F +I+DPRL   Y    AR + +LAD CL K+ K+RP M  VVERLK+I++ S+  D
Sbjct:  315 ADSQRFSMIVDPRLRNNYPAAGARSLAKLADLCLKKNDKERPTMEIVVERLKKIIEESDSED 376
The following BLAST results are available for this feature:
BLAST of FC871454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5707_ARATH7.716e-1150.00Probable receptor-like protein kinase At5g47070 OS... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK2DA11FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2DA11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871454 ID=FC871454; Name=FC871454; organism=Citrus sinensis; type=EST; length=468bp
CGCTGATAGTAAAAAGTTTGGCTTGATAATGGACCCTCGACTTGAGAAAG
AGTACTCGATCAATGAGGCTCGAAAAATTGGCAGGTTAGCAGACAATTGC
TTGTCAAAGAGTTCCAAGGATCGGCCAAAGATGAGTCAGGTGGTGGAGAG
ATTGAAGCAGATAGTGCAAGTTTCAAATGAAGGAGACTCCTTTGATAAAA
CTTTTGAAGAGATCTGTGAAGAGGACCCGGTTGAGGCACAAACGAAGCAG
AAGCAACATGAACCTTCTGAGGCATGGAAAAGACGAATGGCACATTTAGC
TAAACTTGGTGAGCATGTAGAAGGAGCTAGTAGAAGAAGATTGTTGATTA
TGCAGAGATCCAAAGTGGTTTGACAGTTCTTTTCATTTTTTTTTTTTTTT
TGCTGGCTCTCCTATTGGCGCTTCCCTAAGTTTCGTTCGTAATATGTTTA
AAAAAAAAAAAAAAAAAA
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