FC871378

Overview
NameFC871378
Unique NameFC871378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1640 contig Csv1_Contig1640:78..926. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C64_ARATH (Probable protein phosphatase 2C 64 OS=Arabidopsis thaliana GN=At4g38520 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.326e-42
Identity = 85/129 (65.89%), Postives = 99/129 (76.74%), Query Frame = 1
Query:  445 MLSELMNLLRACFRPRSDRYVHSNSDSLGRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKNLLRTSSQCQRT*LGKHIKQQKE 831
            MLS LMN L AC  PRSD+   S SDS GRQ+GLLW++DSG HV G+FSMAVVQAN+LLEDQSQ+ESGSLS+H+ GP+GTFVGVYDGHGGPETSR+INDH+F HLK       QC  + + K   Q  E
Sbjct:    1 MLSGLMNFLNACLWPRSDQQARSASDSGGRQEGLLWFRDSGQHVFGDFSMAVVQANSLLEDQSQLESGSLSSHDSGPFGTFVGVYDGHGGPETSRFINDHMFHHLKR-FTAEQQCMSSEVIKKAFQATE 128          
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C60_ORYSJ (Probable protein phosphatase 2C 60 OS=Oryza sativa subsp. japonica GN=Os06g0717800 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.677e-42
Identity = 82/130 (63.08%), Postives = 97/130 (74.62%), Query Frame = 1
Query:  445 MLSELMNLLRACFRPRSDRYVHSNSDSLGRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKNLLRTSSQCQRT*LGKHIKQQKEG 834
            M+  LMNLLRAC+RP S+++  + SD  GRQDGLLWYKD+G HV+GEFSMAVVQANNLLEDQ Q+ESG LS  + GPYGTFVGVYDGHGGPET+ YINDHLF HLK      +      L K  +  ++G
Sbjct:    1 MIVTLMNLLRACWRPSSNQHARAGSDVAGRQDGLLWYKDTGQHVNGEFSMAVVQANNLLEDQCQIESGPLSFLDSGPYGTFVGVYDGHGGPETACYINDHLFHHLKRFASEQNSISADVLKKAYEATEDG 130          
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C46_ARATH (Probable protein phosphatase 2C 46 OS=Arabidopsis thaliana GN=At3g51370 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.183e-39
Identity = 82/130 (63.08%), Postives = 94/130 (72.31%), Query Frame = 1
Query:  445 MLSELMNLLRACFRPRSDRYVHSNSDSLGRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKNLLRTSSQCQRT*LGKHIKQQKEG 834
            MLS LM LL AC  P S      +SDS G+QDGLLWYKD G H+ GEFSMAVVQANNLLEDQSQVESG LST + GPYGTF+G+YDGHGGPETSR++NDHLFQHLK      +      + K  +  +EG
Sbjct:    1 MLSTLMKLLSACLWPSSSS--GKSSDSTGKQDGLLWYKDFGQHLVGEFSMAVVQANNLLEDQSQVESGPLSTLDSGPYGTFIGIYDGHGGPETSRFVNDHLFQHLKRFAAEQASMSVDVIKKAYEATEEG 128          
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C79_ARATH (Probable protein phosphatase 2C 79 OS=Arabidopsis thaliana GN=At5g66080 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.708e-38
Identity = 80/131 (61.07%), Postives = 91/131 (69.47%), Query Frame = 1
Query:  445 MLSELMNLLRACFRPRSDRYVHSNSDSLGRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLST-HEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKNLLRTSSQCQRT*LGKHIKQQKEG 834
            MLS   N L +C  P S    H+ SDS G+QDGLLWYKDS HH+ G+FSMAVVQANNLLEDQSQVESG L+T    GPYGTFVGVYDGHGGPETSR++NDHLF HLK             + K  +  +EG
Sbjct:    1 MLSLFFNFLTSCLWPSSSTTSHTYSDSKGKQDGLLWYKDSAHHLFGDFSMAVVQANNLLEDQSQVESGPLTTLSSSGPYGTFVGVYDGHGGPETSRFVNDHLFHHLKRFAAEQDSMSVDVIRKAYEATEEG 131          
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C28_ORYSJ (Probable protein phosphatase 2C 28 OS=Oryza sativa subsp. japonica GN=Os03g0137200 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.562e-36
Identity = 76/119 (63.87%), Postives = 91/119 (76.47%), Query Frame = 1
Query:  445 MLSELMNLLRACFRPRSDR-YVHSNSDSLGRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKNLLRTSSQCQRT 798
            ML+ +M+  R+C+ PRS   +    SD  GRQDGLLWYKD+G  V+GEFSMAVVQANNLLEDQSQVESG+LS  E GP GTF+GVYDGHGGPET+R+INDH+F HL+    T  +C  T
Sbjct:    1 MLAAVMDYFRSCWGPRSPAGHRVRGSDVAGRQDGLLWYKDAGQLVTGEFSMAVVQANNLLEDQSQVESGALSMAEPGPQGTFIGVYDGHGGPETARFINDHMFHHLRR-FATEHKCMST 118          
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C38_ARATH (Probable protein phosphatase 2C 38 OS=Arabidopsis thaliana GN=At3g12620 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.164e-35
Identity = 59/102 (57.84%), Postives = 80/102 (78.43%), Query Frame = 1
Query:  457 LMNLLRACFRPRSDRYVHSNSDSLGRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLK 762
            ++ ++  C+R  S +  HS  D+ GR DGLLWYKDSG+HV+GEFSM+V+QANNLLED S++ESG +S  + GP  TFVGVYDGHGGPE +R++N HLF +++
Sbjct:    7 ILRMVAPCWRRPSVKGDHSTRDANGRCDGLLWYKDSGNHVAGEFSMSVIQANNLLEDHSKLESGPVSMFDSGPQATFVGVYDGHGGPEAARFVNKHLFDNIR 108          

HSP 2 Score: 35.8094 bits (81), Expect = 4.164e-35
Identity = 17/30 (56.67%), Postives = 23/30 (76.67%), Query Frame = 3
Query:  759 QEFTSDQQSMSADVIRKAYQATEGGFMSLV 848
            ++FTS+   MSA+VI KA+ ATE  F+SLV
Sbjct:  108 RKFTSENHGMSANVITKAFLATEEDFLSLV 137          
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C48_ARATH (Probable protein phosphatase 2C 48 OS=Arabidopsis thaliana GN=PP2C6 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 7.622e-34
Identity = 62/101 (61.39%), Postives = 78/101 (77.23%), Query Frame = 1
Query:  466 LLRACFRPRS--DRYVHSNSDSLGRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLK 762
            ++  C+RP    +     + D+ GR DGLLWYKDSG+H++GEFSMAVVQANNLLED SQ+ESG +S HE GP  TFVGVYDGHGGPE +R++ND LF ++K
Sbjct:    9 IVSPCWRPFGIGEDSSPGSDDTNGRLDGLLWYKDSGNHITGEFSMAVVQANNLLEDHSQLESGPISLHESGPEATFVGVYDGHGGPEAARFVNDRLFYNIK 109          

HSP 2 Score: 31.9574 bits (71), Expect = 7.622e-34
Identity = 14/30 (46.67%), Postives = 21/30 (70.00%), Query Frame = 3
Query:  759 QEFTSDQQSMSADVIRKAYQATEGGFMSLV 848
            + +TS+Q+ MS DVI + + ATE  F+ LV
Sbjct:  109 KRYTSEQRGMSPDVITRGFVATEEEFLGLV 138          
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C72_ORYSJ (Probable protein phosphatase 2C 72 OS=Oryza sativa subsp. japonica GN=Os10g0544900 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.267e-33
Identity = 76/132 (57.58%), Postives = 87/132 (65.91%), Query Frame = 1
Query:  445 MLSELMNLLRACFRPRSDRY--VHSNSDSLGRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKNLLRTSSQCQRT*LGKHIKQQKEG 834
            MLS  M  LR+C+ P S         SD+ GRQDGLLWYKD+G  V+GEFSMAVVQANNLLED SQVESG LST +    GT VGVYDGHGGPET+RYINDHLF HL+             + K  +  +EG
Sbjct:    1 MLSAAMEYLRSCWGPASSPAGRPRKGSDAAGRQDGLLWYKDAGQLVAGEFSMAVVQANNLLEDHSQVESGPLSTTDPNLQGTLVGVYDGHGGPETARYINDHLFNHLRGFASEHKCMSADVIRKAFRATEEG 132          
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C25_ORYSJ (Probable protein phosphatase 2C 25 OS=Oryza sativa subsp. japonica GN=Os02g0685600 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.626e-25
Identity = 59/118 (50.00%), Postives = 71/118 (60.17%), Query Frame = 1
Query:  445 MLSELMNLLRACFRPRSDRYVHSNSDSLGRQ------DGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKNLLRTS 780
            M S L+ +  AC  P + RY  +  D  G        DGLLW +D G H +GEFS AVVQAN  LED SQVE+GS +        TFVGVYDGHGG + +R+I+DHLF HL  L R S
Sbjct:    1 MFSWLLRIASACLGP-ARRYARTRKDEDGGDNGGGVADGLLWSRDLGRHAAGEFSFAVVQANEALEDHSQVETGSAA--------TFVGVYDGHGGADAARFISDHLFAHLIRLARES 109          

HSP 2 Score: 28.8758 bits (63), Expect = 6.626e-25
Identity = 11/25 (44.00%), Postives = 20/25 (80.00%), Query Frame = 3
Query:  774 DQQSMSADVIRKAYQATEGGFMSLV 848
            + +++S +V+R A+ ATE GF++LV
Sbjct:  108 ESETVSEEVVRGAFSATEEGFLTLV 132          
BLAST of FC871378 vs. ExPASy Swiss-Prot
Match: P2C42_ARATH (Probable protein phosphatase 2C 42 OS=Arabidopsis thaliana GN=At3g17090 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.127e-24
Identity = 58/119 (48.74%), Postives = 74/119 (62.18%), Query Frame = 1
Query:  445 MLSELMNLLRACFRPRSDRYVHSNSDSLGR-----------QDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKNL 768
            M   LMNL   CF+P      +S + S G            +DGLLW++D G +  G+FSMAV+QAN +LEDQSQVESG+        +GTFVGVYDGHGGPE +RY+ DHLF H + +
Sbjct:    1 MSGSLMNLFSLCFKPFGHVCDNSEAGSGGGGGVSGGTGGEGKDGLLWFRDLGKYCGGDFSMAVIQANQVLEDQSQVESGN--------FGTFVGVYDGHGGPEAARYVCDHLFNHFREI 111          
The following BLAST results are available for this feature:
BLAST of FC871378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
P2C64_ARATH3.326e-4265.89Probable protein phosphatase 2C 64 OS=Arabidopsis ... [more]
P2C60_ORYSJ9.677e-4263.08Probable protein phosphatase 2C 60 OS=Oryza sativa... [more]
P2C46_ARATH1.183e-3963.08Probable protein phosphatase 2C 46 OS=Arabidopsis ... [more]
P2C79_ARATH1.708e-3861.07Probable protein phosphatase 2C 79 OS=Arabidopsis ... [more]
P2C28_ORYSJ3.562e-3663.87Probable protein phosphatase 2C 28 OS=Oryza sativa... [more]
P2C38_ARATH4.164e-3557.84Probable protein phosphatase 2C 38 OS=Arabidopsis ... [more]
P2C48_ARATH7.622e-3461.39Probable protein phosphatase 2C 48 OS=Arabidopsis ... [more]
P2C72_ORYSJ1.267e-3357.58Probable protein phosphatase 2C 72 OS=Oryza sativa... [more]
P2C25_ORYSJ6.626e-2550.00Probable protein phosphatase 2C 25 OS=Oryza sativa... [more]
P2C42_ARATH3.127e-2448.74Probable protein phosphatase 2C 42 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2CE02FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2CE02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871378 ID=FC871378; Name=FC871378; organism=Citrus sinensis; type=EST; length=848bp
GAACTGGACCTTTGCTTTGCTGGCTTCAAGCTCTCCATTGTTGCTCCTTT
ATTGGTCTTGTCTGCTAAGCTTTTTACATAGAAAGACCCTTTTCAGTTTT
CATTTGTTTCATCCAATTCTGCACATAAATTTTCCGGGAGGAAAAAAAAA
AAGAGAAGCTCCTTTGTGTTGTTGGACTCAAAAACAAGTCGAACCCATCT
TCAGTTTTTCTCTCCTGATTTGATTGATCCATAGATCTAATGATTTGAAT
GATACCCACATGAAAGTTTGTCCTTTTTAGATCCCCCTTCTCTCTTGTTC
ATCAACCTTGAGATATTTAGTCAAACTAAGGAGTGTTTGAGAAGTAGAGA
AGCATATACATAACAGCTGGAATATTTGAGCAGTGTTGTTTAGAGAGGCT
ATTAGATGTGGAGAATTCCGAGGGTTGTCTGGATGAGATGAGGGATGTTA
TCGGAGTTAATGAACCTTTTGAGGGCCTGTTTTCGGCCAAGGTCCGATCG
ATATGTTCACTCGAATTCGGATTCTTTGGGTCGTCAAGATGGCTTATTGT
GGTACAAAGATAGTGGACATCATGTAAGTGGTGAGTTCTCAATGGCTGTA
GTTCAGGCCAATAATTTACTTGAGGATCAAAGCCAAGTGGAGTCAGGGAG
TCTGAGCACTCACGAGTTTGGGCCATATGGTACCTTTGTTGGTGTCTATG
ATGGTCATGGAGGACCTGAGACATCGCGCTATATCAACGATCACCTCTTT
CAACATCTCAAGAATTTACTTCGGACCAGCAGTCAATGTCAGCGGACGTG
ATTAGGAAAGCATATCAAGCAACAGAAGGAGGGTTTATGTCTCTTGTT
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