EY715935

Overview
NameEY715935
Unique NameEY715935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY715935 vs. ExPASy Swiss-Prot
Match: RL292_ARATH (60S ribosomal protein L29-2 OS=Arabidopsis thaliana GN=RPL29B PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 4.620e-14
Identity = 38/57 (66.67%), Postives = 41/57 (71.93%), Query Frame = 3 
Query:  285 MAKSKNHTAHNESYKAHKNGIXXXXXXXXXXXXGMDPKFLRNQRYARKHNKSNGGSA 455
            MAKSKNHTAHN+S KAHKNGI            GMDPKFLRNQRYARKHN  +G +A
Sbjct:    1 MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSGENA 57
[Close]
BLAST of EY715935 vs. ExPASy Swiss-Prot
Match: RL291_ARATH (60S ribosomal protein L29-1 OS=Arabidopsis thaliana GN=RPL29A PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.034e-14
Identity = 41/61 (67.21%), Postives = 42/61 (68.85%), Query Frame = 3 
Query:  285 MAKSKNHTAHNESYKAHKNGIXXXXXXXXXXXXGMDPKFLRNQRYARKHNKSNG--GSAEE 461
            MAKSKNHTAHN+S KAHKNGI            GMDPKFLRNQRYARKHN   G   SAEE
Sbjct:    1 MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAEE 61
The following BLAST results are available for this feature:
BLAST of EY715935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
RL292_ARATH4.620e-1466.6760S ribosomal protein L29-2 OS=Arabidopsis thalian... [more]
RL291_ARATH6.034e-1467.2160S ribosomal protein L29-1 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-060-D12-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY715935 ID=EY715935; Name=EY715935; organism=Citrus sinensis; type=EST; length=957bp
CACACAACAGCCAAAAAAAAACTCCCTCTCTTTCAANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCCACGCGTCCGAGCAGCGTTAATT
CTTCCTCGCTTGTCTTTGCCGGCCATAACCCTGCTATCCTCAGTTGCTCA
TCCCAAACCGATCCTTTTGGTCCGTTGCTTTCTGCAGTTCCCTAGATAAT
ATCGAAATCAGCTTGCTTGTATACTCAAATTATTTATCTATAACTGTGTT
TTAAATTAACTTTTGATTGCTCAATTTCAGAAAGATGGCCAAGTCCAAGA
ATCACACTGCCCATAACGAGTCTTACAAAGCCCACAAGAATGGAATCAAG
AAACCCAAGAAGCACACACACACTTCAACCAAAGGGATGGATCCTAAGTT
TCTGAGGAATCAAAGGTACGCAAGGAAGCATAACAAGAGTAACGGCGGAT
CAGCTGAGGAGGATAAACGCTAAAGCCAAGTGTCTATTATTTTTATTTTA
CCAAAGCTGCTTGTTTAATCAGCTCTTGTTATAAAATACAATTTTGCTTG
AATTGCAAACCAAACATGATTCCACCCCTAAAGTGATATTATGTGATCGC
TCAACCATATAATCGCTTTTGAATGTTTTACCGCACAAGCTTACCTTGAA
CCACCCAGGAAAATAAAATCTTTAATAAAGAGATACAATTCACCATGGAA
GCACGAATATGTGAGGTCTAACTACAACACGAAAGATAATGTAGGCACAG
AAGAACGAGAGGAATAAAACAGCAGACTCATCACACCTACAATACCCCCC
ATCCCACCCACCCCCAACCACCTCAAAAAACACACCCACTCCACCCCTCC
CCGCCACAGACCACACCTCTAAAACCTCGAAACTAAATGAAAACACCACT
GACCAAACAGAGTATCGTATCGTCCATCTTCATTTACTCTTATTTATACC
CACCCGC
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