FC871349

Overview
NameFC871349
Unique NameFC871349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length830
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1201 contig Csv1_Contig1201:272..1101. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871349 vs. ExPASy Swiss-Prot
Match: YOOF_SCHPO (Uncharacterized hydroxylase C887.15c OS=Schizosaccharomyces pombe GN=SPBC887.15c PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 7.433e-55
Identity = 111/256 (43.36%), Postives = 150/256 (58.59%), Query Frame = 2
Query:   53 PILVYWLYSGL-----YVVLGSFDKLDNYRLHSRIDEDEKNLVSKGDVVKGVLLQQVFQAIVAILLFAVTGNGAGA-EANQ----------------QSSP---------IAIARQFVIAMLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFATIKTVDDHCGLWLPGNLFHVFFKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGTYMP 727
            P+++YW+ S       Y+ L  F+K   YR+H   +   +N V +  VVK VL QQ+ + +V I L    G      EA Q                Q +P         I  A Q+  A  ++D+WQYF HRY+H+NK LY  IH+ HHRL VPYA GALYNHP EGL+ DT G  +++L +G+SP+ ++ FF+ +T+KTVDDHCG   P +   +FF NN  YHD+HHQ YG + NF+QPFF  WD +LGTYMP
Sbjct:   21 PVIIYWVASAFFGFLHYIELPVFEK---YRIHPPEEIARRNRVPQMAVVKAVLFQQLCEVVVGIALAMFEGYPEPIDEAKQMLRYEAFFSKNLPALLQVAPFAPKLAYNFIVPAFQYFFAFFIIDSWQYFWHRYLHYNKKLYNMIHAHHHRLQVPYAMGALYNHPFEGLILDTFGAGVAYLAAGLSPQQAVIFFTLSTLKTVDDHCGYVFPYDPLQMFFANNARYHDLHHQPYGFQKNFSQPFFTFWDHVLGTYMP 273          
BLAST of FC871349 vs. ExPASy Swiss-Prot
Match: SUR2_YEAST (Sphingolipid C4-hydroxylase SUR2 OS=Saccharomyces cerevisiae GN=SUR2 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.895e-50
Identity = 101/252 (40.08%), Postives = 143/252 (56.75%), Query Frame = 2
Query:   23 ISDELLGTFVPILVYWLYSGLYVVLGSFDKLDNYRLHSRIDEDEKNLVSKGDVVKGVLLQQVFQAIVAILL-----FAVTGNGAGAEANQQSSPIAI---------------ARQFVIAMLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFATIKTVDDHCGLWLPGNLFHVFFKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGT 718
            +SD +L    P++ YW  SG++ V+ +F   + YR+H   +  ++N  S+  V   V+LQ + Q IV ++        +TG    A    ++    I               A +     L +DTWQYF+HR MH NK LY+  HS+HH L VPYA+GAL+N+P+EG L DT+G  ++  ++ ++ R  I  F+FAT+KTVDDHCG  LP + F   F NN  YHDIHHQ +G K NFAQPFF  WD +  T
Sbjct:   46 MSDGVLALVAPVVAYWALSGIFHVIDTFHLAEKYRIHPSEEVAKRNKASRMHVFLEVILQHIIQTIVGLIFMHFEPIYMTGFEENAMWKLRADLPRIIPDAAIYYGYMYGMSALKIFAGFLFVDTWQYFLHRLMHMNKTLYKWFHSVHHELYVPYAYGALFNNPVEGFLLDTLGTGIAMTLTHLTHREQIILFTFATMKTVDDHCGYALPLDPFQWLFPNNAVYHDIHHQQFGIKTNFAQPFFTFWDNLFQT 297          
BLAST of FC871349 vs. ExPASy Swiss-Prot
Match: ERG25_PIG (C-4 methylsterol oxidase OS=Sus scrofa GN=SC4MOL PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.370e-16
Identity = 52/147 (35.37%), Postives = 78/147 (53.06%), Query Frame = 2
Query:  290 IAIARQFVIAMLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFAT---IKTVDDHCGLWLPGNLFHVF-FKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGT 718
            IA+AR F  A+ + DTW YF+HR +HH + +Y++IH +HH    P+   A Y HP+E L+   +G      +  +   V I  +++ T   I+T+D H G  +P N  H+  F   + +HD HH  +   Y      F  WDRI GT
Sbjct:  137 IALARCFGCAV-IEDTWHYFLHRLLHHKR-IYKYIHKIHHEFQAPFGMEAEYAHPLETLI---LGTGFFIGIMLLCDHV-ILLWAWVTVRLIETIDVHSGYDIPLNPLHLIPFYAGSRHHDFHHMNFIGNY---ASTFTWWDRIFGT 274          
BLAST of FC871349 vs. ExPASy Swiss-Prot
Match: ERG25_DANRE (C-4 methylsterol oxidase OS=Danio rerio GN=sc4mol PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.376e-15
Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = 2
Query:  287 PIAIARQFVIAMLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFAT---IKTVDDHCGLWLPGNLFHVF-FKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGT 718
            P  +A+ F  A+ + DTW YF+HR +HH + +Y++IH +HH    P+   A Y HP+E L    I GA  F+ + +     I  +++ T   ++T+D H G  +P N  H+  F     +HD HH  +   Y      F  WDR+  T
Sbjct:  136 PFLLAQCFGCAV-IEDTWHYFLHRALHHRR-IYKYIHKVHHDFTSPFGMQAEYAHPLETL----ILGAGFFIGTMVFCNHMILLWAWVTFRLLETIDVHSGYDIPLNPLHLIPFYAGARFHDFHHMNFVGNYGST---FTWWDRLFDT 274          
BLAST of FC871349 vs. ExPASy Swiss-Prot
Match: ERG25_MACFA (C-4 methylsterol oxidase OS=Macaca fascicularis GN=SC4MOL PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.409e-15
Identity = 50/145 (34.48%), Postives = 76/145 (52.41%), Query Frame = 2
Query:  296 IARQFVIAMLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFATIK---TVDDHCGLWLPGNLFHVF-FKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGT 718
            +AR F  A+ + DTW YFMHR +HH + +Y++IH +HH    P+   A Y HP+E L+   +G      +  +   V I  +++ TI+   T+D H G  +P N  ++  F   + +HD HH  +   Y      F  WDRI GT
Sbjct:  139 LARCFGCAV-IEDTWHYFMHRLLHHKR-IYKYIHKVHHEFQAPFGMEAEYAHPLETLI---LGTGFFIGIVLLCDHV-ILLWAWVTIRLLETIDVHSGYDIPLNPLNLIPFYAGSRHHDFHHMNFIGNY---ASTFTWWDRIFGT 274          
BLAST of FC871349 vs. ExPASy Swiss-Prot
Match: ERG25_PONAB (C-4 methylsterol oxidase OS=Pongo abelii GN=SC4MOL PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.822e-15
Identity = 49/145 (33.79%), Postives = 76/145 (52.41%), Query Frame = 2
Query:  296 IARQFVIAMLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFATIK---TVDDHCGLWLPGNLFHVF-FKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGT 718
            +AR F  A+ + DTW YF+HR +HH + +Y++IH +HH    P+   A Y HP+E L+   +G      +  +   V I  +++ TI+   T+D H G  +P N  ++  F   + +HD HH  +   Y      F  WDRI GT
Sbjct:  139 LARCFGCAV-IEDTWHYFLHRLLHHKR-IYKYIHKVHHEFQAPFGMEAEYAHPLETLI---LGTGFFIGIVLLCDHV-ILLWAWVTIRLLETIDVHSGYDIPLNPLNLIPFYAGSRHHDFHHMNFIGNY---ASTFTWWDRIFGT 274          
BLAST of FC871349 vs. ExPASy Swiss-Prot
Match: ERG25_HUMAN (C-4 methylsterol oxidase OS=Homo sapiens GN=SC4MOL PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.822e-15
Identity = 49/145 (33.79%), Postives = 76/145 (52.41%), Query Frame = 2
Query:  296 IARQFVIAMLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFATIK---TVDDHCGLWLPGNLFHVF-FKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGT 718
            +AR F  A+ + DTW YF+HR +HH + +Y++IH +HH    P+   A Y HP+E L+   +G      +  +   V I  +++ TI+   T+D H G  +P N  ++  F   + +HD HH  +   Y      F  WDRI GT
Sbjct:  139 LARCFGCAV-IEDTWHYFLHRLLHHKR-IYKYIHKVHHEFQAPFGMEAEYAHPLETLI---LGTGFFIGIVLLCDHV-ILLWAWVTIRLLETIDVHSGYDIPLNPLNLIPFYAGSRHHDFHHMNFIGNY---ASTFTWWDRIFGT 274          
BLAST of FC871349 vs. ExPASy Swiss-Prot
Match: ERG25_RAT (C-4 methylsterol oxidase OS=Rattus norvegicus GN=Sc4mol PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.283e-14
Identity = 43/133 (32.33%), Postives = 69/133 (51.88%), Query Frame = 2
Query:  323 LVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFATIKTVDDHCGLWLPGN-LFHVFFKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGT 718
            ++ DTW YF+HR +HH + +Y++IH +HH    P+   A Y HP+E L+  T G  +  ++      +   + +   ++T+D H G  +P N L ++ F     +HD HH  +   Y      F  WDRI GT
Sbjct:  147 VIEDTWHYFLHRLLHHKR-IYKYIHKVHHEFQAPFGIEAEYAHPLETLILGT-GFFIGIVLLCDHVILLWAWVTMRLLETIDVHSGYDIPLNPLNYIPFYTGARHHDFHHMNFIGNY---ASTFTWWDRIFGT 274          
BLAST of FC871349 vs. ExPASy Swiss-Prot
Match: ERG25_CHICK (C-4 methylsterol oxidase OS=Gallus gallus GN=SC4MOL PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.732e-14
Identity = 46/136 (33.82%), Postives = 69/136 (50.74%), Query Frame = 2
Query:  323 LVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFA---TIKTVDDHCGLWLPGNLFH-VFFKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGT 718
            ++ D W YF+HR +HH + +Y++IH +HH  V P+   A Y HP+E L    I GA  F+   +     +  +++     ++T+D H G  +P N  H V F     +HD HH  +   Y      F  WDRI GT
Sbjct:  147 VIEDAWHYFLHRLLHHKR-IYKYIHKVHHEFVSPFGMQAEYAHPLETL----ILGAGFFIGIVVFCNHVVLLWAWVICRLMETIDVHSGYDIPLNPLHLVPFYAGARFHDFHHMNFIGNY---ASTFTWWDRIFGT 274          
BLAST of FC871349 vs. ExPASy Swiss-Prot
Match: ERG25_MOUSE (C-4 methylsterol oxidase OS=Mus musculus GN=Sc4mol PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.366e-14
Identity = 45/136 (33.09%), Postives = 70/136 (51.47%), Query Frame = 2
Query:  323 LVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFATIK---TVDDHCGLWLPGN-LFHVFFKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGT 718
            ++ DTW YF+HR +HH + +Y++IH +HH    P+   A Y HP+E L+   +G      +  +   V I  +++ TI+   T+D H G  +P N L  V F     +HD HH  +   Y      F  WD++ GT
Sbjct:  147 VIEDTWHYFLHRLLHHKR-IYKYIHKVHHEFQAPFGIEAEYAHPLETLI---LGTGFFIGIVLLCDHV-ILLWAWVTIRLLETIDVHSGYDIPLNPLNLVPFYTGARHHDFHHMNFIGNY---ASTFTWWDKLFGT 274          
The following BLAST results are available for this feature:
BLAST of FC871349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
YOOF_SCHPO7.433e-5543.36Uncharacterized hydroxylase C887.15c OS=Schizosacc... [more]
SUR2_YEAST1.895e-5040.08Sphingolipid C4-hydroxylase SUR2 OS=Saccharomyces ... [more]
ERG25_PIG1.370e-1635.37C-4 methylsterol oxidase OS=Sus scrofa GN=SC4MOL P... [more]
ERG25_DANRE3.376e-1533.11C-4 methylsterol oxidase OS=Danio rerio GN=sc4mol ... [more]
ERG25_MACFA4.409e-1534.48C-4 methylsterol oxidase OS=Macaca fascicularis GN... [more]
ERG25_PONAB9.822e-1533.79C-4 methylsterol oxidase OS=Pongo abelii GN=SC4MOL... [more]
ERG25_HUMAN9.822e-1533.79C-4 methylsterol oxidase OS=Homo sapiens GN=SC4MOL... [more]
ERG25_RAT1.283e-1432.33C-4 methylsterol oxidase OS=Rattus norvegicus GN=S... [more]
ERG25_CHICK3.732e-1433.82C-4 methylsterol oxidase OS=Gallus gallus GN=SC4MO... [more]
ERG25_MOUSE6.366e-1433.09C-4 methylsterol oxidase OS=Mus musculus GN=Sc4mol... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2CB03FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2CB03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871349 ID=FC871349; Name=FC871349; organism=Citrus sinensis; type=EST; length=830bp
CGTCAACACGATGGCGTTTACGATTTCCGACGAATTGTTGGGCACTTTCG
TCCCAATTTTAGTCTATTGGTTGTATTCAGGATTATACGTCGTTCTTGGA
TCTTTTGATAAGCTTGATAATTATAGATTGCATTCGAGAATTGACGAGGA
CGAGAAAAATTTGGTCTCTAAGGGCGATGTCGTTAAAGGCGTTCTCCTTC
AGCAAGTTTTTCAGGCTATTGTTGCAATTCTCTTGTTTGCGGTGACAGGA
AATGGTGCTGGGGCAGAAGCCAATCAACAGTCTTCTCCAATTGCTATAGC
TCGGCAGTTTGTTATAGCAATGTTGGTTATGGATACATGGCAGTATTTTA
TGCATAGGTACATGCACCACAACAAGTTTTTGTATCGACACATCCATTCT
CTACATCACCGCCTTGTTGTCCCCTATGCATTTGGAGCTTTGTACAATCA
CCCCATTGAGGGGCTTCTTAATGACACAATTGGCGGTGCCTTATCTTTTC
TCGTTTCCGGTATGTCTCCCCGAGTCTCCATCTTCTTCTTTTCCTTTGCC
ACCATCAAAACAGTGGATGACCACTGTGGATTATGGCTTCCTGGAAACCT
CTTCCACGTGTTCTTCAAAAACAACACTGCCTATCATGATATCCACCATC
AACTTTATGGGAGCAAATACAACTTTGCACAACCATTCTTCGTGATGTGG
GATAGAATTCTTGGAACCTATATGCCCCTATCACTTGAGAAGAGACCAGA
TGGTGGCTTTGAAGCGCTGGCTACAAAGGATTACAAGCAGACGAAAGATT
ACAAGGACAACTGATTATACGTTAGGACCA
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