EY686287

Overview
NameEY686287
Unique NameEY686287
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length777
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY686287 vs. ExPASy Swiss-Prot
Match: COPZ1_ARATH (Coatomer subunit zeta-1 OS=Arabidopsis thaliana GN=At1g60970 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.657e-45
Identity = 87/110 (79.09%), Postives = 99/110 (90.00%), Query Frame = 1
Query:  112 MDTCPSIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLTGNVDKK 441
            M+  P +KNILLLDSEGKRVAVKYYS+DWPTNSA+EAFEK+VFTKTQKTNARTE E+  LE N++VYKFVQDLHFFVTGGE+ENELILA+VL+G FDAV LLL  NVDK+
Sbjct:    1 MELPPKVKNILLLDSEGKRVAVKYYSDDWPTNSAQEAFEKSVFTKTQKTNARTEVEVTALENNIVVYKFVQDLHFFVTGGEEENELILASVLEGLFDAVTLLLRSNVDKR 110          
BLAST of EY686287 vs. ExPASy Swiss-Prot
Match: COPZ2_ARATH (Coatomer subunit zeta-2 OS=Arabidopsis thaliana GN=At3g09800 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.146e-45
Identity = 87/110 (79.09%), Postives = 99/110 (90.00%), Query Frame = 1
Query:  109 SMDTCPSIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLTGNVDK 438
            S D+CP +KNILLLDSEGKRVAVKYYS+DWPTN+AK +FEK VF+KT KTNARTEAEI +L+ N+IVYKF QDLHFFVTGGE+ENELILA+VLQGFFDAV LLL  NV+K
Sbjct:    2 SPDSCPLVKNILLLDSEGKRVAVKYYSDDWPTNAAKLSFEKYVFSKTSKTNARTEAEITLLDSNIIVYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEK 111          
BLAST of EY686287 vs. ExPASy Swiss-Prot
Match: COPZ3_ARATH (Coatomer subunit zeta-3 OS=Arabidopsis thaliana GN=At4g08520 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.006e-43
Identity = 83/108 (76.85%), Postives = 97/108 (89.81%), Query Frame = 1
Query:  115 DTCPSIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLTGNVDK 438
            D+CP +KNILLLDSEGKRVAVKYYS+DW TN++K AFEK VF+KT KTNARTEAEI +LE N++VYKF QDLHFFVTGGE+ENEL+L++VLQGFFDAV LLL  NV+K
Sbjct:    6 DSCPLVKNILLLDSEGKRVAVKYYSDDWATNASKLAFEKYVFSKTSKTNARTEAEITLLESNIVVYKFAQDLHFFVTGGENENELVLSSVLQGFFDAVALLLRNNVEK 113          
BLAST of EY686287 vs. ExPASy Swiss-Prot
Match: COPZ1_ORYSJ (Coatomer subunit zeta-1 OS=Oryza sativa subsp. japonica GN=COPZ1 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.218e-42
Identity = 81/110 (73.64%), Postives = 97/110 (88.18%), Query Frame = 1
Query:  112 MDTCPSIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLTGNVDKK 441
            M++CPS+KNILLLDSEGKRVAVKYY++DWPT SAK AFEK+VF KTQK  A  EAEI M +G+++VYKF+QDLHFFVTGGE+ENELILA+VLQGF DAV ++L  NVDK+
Sbjct:    1 MESCPSVKNILLLDSEGKRVAVKYYTDDWPTLSAKLAFEKSVFVKTQKATAGAEAEIVMFDGHIVVYKFIQDLHFFVTGGEEENELILASVLQGFTDAVDIILRNNVDKR 110          
BLAST of EY686287 vs. ExPASy Swiss-Prot
Match: COPZ2_ORYSJ (Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica GN=COPZ2 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.942e-42
Identity = 80/111 (72.07%), Postives = 100/111 (90.09%), Query Frame = 1
Query:  109 SMDTCPSIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLTGNVDKK 441
            S ++CPS+KNILLLDSEGKRVAVKY+S+DW +N++K AFEK+VFTKT KTNAR+EAEI + +G ++VYKFVQDLHFFVT G+DENELI+A VLQGF D+VGLLL G+V+K+
Sbjct:    5 SKESCPSVKNILLLDSEGKRVAVKYFSDDWSSNASKLAFEKSVFTKTLKTNARSEAEITLFDGYIVVYKFVQDLHFFVTAGDDENELIIANVLQGFSDSVGLLLRGDVEKR 115          
BLAST of EY686287 vs. ExPASy Swiss-Prot
Match: COPZ3_ORYSJ (Coatomer subunit zeta-3 OS=Oryza sativa subsp. japonica GN=Os01g0838800 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.890e-40
Identity = 76/110 (69.09%), Postives = 96/110 (87.27%), Query Frame = 1
Query:  112 MDTCPSIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLTGNVDKK 441
            M++CPS+KNIL+LDSEGKRVAVKYYS+DWP+ S+K+AFEK+VF KTQKT+ARTEAEI M +   +VYKF+QDLHFFVTGG++ENELILA+VLQGF +A+  LL   V ++
Sbjct:    1 MESCPSVKNILVLDSEGKRVAVKYYSDDWPSLSSKQAFEKSVFAKTQKTSARTEAEIVMFDSYFVVYKFIQDLHFFVTGGDEENELILASVLQGFSEAIDYLLRNKVHRR 110          
BLAST of EY686287 vs. ExPASy Swiss-Prot
Match: COPZ1_BOVIN (Coatomer subunit zeta-1 OS=Bos taurus GN=COPZ1 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 4.501e-19
Identity = 48/105 (45.71%), Postives = 72/105 (68.57%), Query Frame = 1
Query:  127 SIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLTGNVDKK 441
            ++K IL+LD++G R+  KYY + +P+   ++AFEK +F KT     RT++EIA+LEG  +VYK   DL+F+V G   ENEL+L TVL   FD++  +L  NV+K+
Sbjct:   12 TVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKTH----RTDSEIALLEGLTVVYKSSIDLYFYVIGSSYENELMLMTVLNCLFDSLSQMLRKNVEKR 112          
BLAST of EY686287 vs. ExPASy Swiss-Prot
Match: COPZ1_PONAB (Coatomer subunit zeta-1 OS=Pongo abelii GN=COPZ1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.710e-18
Identity = 47/105 (44.76%), Postives = 71/105 (67.62%), Query Frame = 1
Query:  127 SIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLTGNVDKK 441
            ++K IL+LD++G R+  KYY + +P+   ++AFEK +F KT     RT++EIA+LEG  +VYK   DL+F+V G   ENEL+L  VL   FD++  +L  NV+K+
Sbjct:   12 TVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKTH----RTDSEIALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKR 112          
BLAST of EY686287 vs. ExPASy Swiss-Prot
Match: COPZ1_MOUSE (Coatomer subunit zeta-1 OS=Mus musculus GN=Copz1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.710e-18
Identity = 47/105 (44.76%), Postives = 71/105 (67.62%), Query Frame = 1
Query:  127 SIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLTGNVDKK 441
            ++K IL+LD++G R+  KYY + +P+   ++AFEK +F KT     RT++EIA+LEG  +VYK   DL+F+V G   ENEL+L  VL   FD++  +L  NV+K+
Sbjct:   12 TVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKTH----RTDSEIALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKR 112          
BLAST of EY686287 vs. ExPASy Swiss-Prot
Match: COPZ1_HUMAN (Coatomer subunit zeta-1 OS=Homo sapiens GN=COPZ1 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.710e-18
Identity = 47/105 (44.76%), Postives = 71/105 (67.62%), Query Frame = 1
Query:  127 SIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLTGNVDKK 441
            ++K IL+LD++G R+  KYY + +P+   ++AFEK +F KT     RT++EIA+LEG  +VYK   DL+F+V G   ENEL+L  VL   FD++  +L  NV+K+
Sbjct:   12 TVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKTH----RTDSEIALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKR 112          
The following BLAST results are available for this feature:
BLAST of EY686287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
COPZ1_ARATH3.657e-4579.09Coatomer subunit zeta-1 OS=Arabidopsis thaliana GN... [more]
COPZ2_ARATH8.146e-4579.09Coatomer subunit zeta-2 OS=Arabidopsis thaliana GN... [more]
COPZ3_ARATH2.006e-4376.85Coatomer subunit zeta-3 OS=Arabidopsis thaliana GN... [more]
COPZ1_ORYSJ2.218e-4273.64Coatomer subunit zeta-1 OS=Oryza sativa subsp. jap... [more]
COPZ2_ORYSJ4.942e-4272.07Coatomer subunit zeta-2 OS=Oryza sativa subsp. jap... [more]
COPZ3_ORYSJ7.890e-4069.09Coatomer subunit zeta-3 OS=Oryza sativa subsp. jap... [more]
COPZ1_BOVIN4.501e-1945.71Coatomer subunit zeta-1 OS=Bos taurus GN=COPZ1 PE=... [more]
COPZ1_PONAB1.710e-1844.76Coatomer subunit zeta-1 OS=Pongo abelii GN=COPZ1 P... [more]
COPZ1_MOUSE1.710e-1844.76Coatomer subunit zeta-1 OS=Mus musculus GN=Copz1 P... [more]
COPZ1_HUMAN1.710e-1844.76Coatomer subunit zeta-1 OS=Homo sapiens GN=COPZ1 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-042-A12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY686287 ID=EY686287; Name=EY686287; organism=Citrus sinensis; type=EST; length=777bp
CACAAACGTCCATTACGTCCTTCTCTGTATTGTAATCTTCCTTGACTCTC
GGGAGTCTCACCGCTCGAAATTAATTGACTGCAGACGACCAAGTTTAATC
GAACAACAAGCATGGATACTTGTCCGTCCATAAAGAATATCCTTCTCCTG
GATTCTGAAGGGAAACGTGTAGCAGTCAAGTATTATTCAAATGACTGGCC
AACCAACAGTGCAAAGGAAGCTTTTGAGAAAGCTGTGTTTACCAAGACCC
AGAAAACAAATGCACGGACCGAAGCGGAGATAGCTATGCTTGAGGGCAAC
GTTATTGTTTACAAGTTTGTTCAAGACCTTCACTTTTTTGTCACTGGGGG
TGAAGATGAAAATGAGCTGATCTTAGCCACAGTTCTTCAGGGATTTTTTG
ATGCAGTTGGTCTTCTTCTTACAGGCAATGTGGACAAGAAGGAGGCTCTT
GAGAACTTGGATCTTATCTTGCTGGCGCTTGATGAAATTGATGATGGGAA
GGCATCCAACGCTGTTAATCCGCAACATTGCAACTCAACTTAGCAACAGT
GCACTTATACGAAGCTTGCCTAAGAATCAAACTACTGTGCAGACGCACAC
AAACATGCCACAACTCAATCCTTTGCGACTCCGATGAAGCCACACCCCAA
ACGAAAAGCAGAAACATAACCTGAAACGCCCTACAAACGGCACATCGCTC
CGCGCCGCCACCGGCCGACGGCCCACATACCGCCACCACGCGAACACACC
ACGACCCCCACAACCGCACCGAACCCA
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