DY257328

Overview
NameDY257328
Unique NameDY257328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1117 contig Csv1_Contig1117:86..906. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257328 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 273.092 bits (697), Expect = 1.323e-72
Identity = 127/206 (61.65%), Postives = 167/206 (81.07%), Query Frame = 2
Query:   41 VIILFFSPYSSDGRIIFCLVDKEF*FETDPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGVVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKV 658
            V+ ++   ++S  R +  LV+K   FET  VDL+KGEQR PEYL +QPFG++PV+ DGD+ ++ESRAIMRY AEKYRSQG +LLGKTIEERG VEQWL+VEA +Y+P +  LT+ ++F+   G P DEK++KES+EKL + LDVYE +LSK++YLAGDF SLADL+H+PFT YLVGP+G+ H+I+DRKHVSAWWD IS+R +WK+V
Sbjct:    2 VLTIYAPLFASSKRAVVTLVEKGVSFETVNVDLMKGEQRQPEYLAIQPFGKIPVLVDGDYKIFESRAIMRYIAEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVGPIGKAHLIKDRKHVSAWWDKISSRAAWKEV 207          
BLAST of DY257328 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.066e-50
Identity = 92/196 (46.94%), Postives = 134/196 (68.37%), Query Frame = 2
Query:   80 RIIFCLVDKEF*FETDPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGVVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLEL 667
            R++ C ++K+  FE   VDL K EQ+ P++L  QPFG++P I+DG   L+ESRAI RYYA KY  QGT+LLGKT+E R +V+QW+EVE + +      L + ++F  K G+P D  LV+E   K  K LDVYE RL+ ++YL GD F+LADLSH+P   Y++       ++  R++++ WW++IS RP+WKK++EL
Sbjct:   16 RVLLCFLEKDIEFEVIHVDLDKLEQKKPQHLLRQPFGQVPAIEDGYLKLFESRAIARYYATKYADQGTDLLGKTLEGRAIVDQWVEVENNYFYAVALPLVMNVVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211          
BLAST of DY257328 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.590e-41
Identity = 81/195 (41.54%), Postives = 119/195 (61.03%), Query Frame = 2
Query:   80 RIIFCLVDKEF*FETDPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGVVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLE 664
            R+I  L +K+  FE  PV++  G+ +   ++ L PFG++P  +DGD  L+ESRAI +Y A  Y  +G +LL    ++  ++  W+EVE+  ++P   +LT +++     G   D+  V E++EKLGK LDVYE RL  SKYL GD F+LADL H P  +YL+G   +  +   R HVSAW  DI  RP+W K +E
Sbjct:   16 RVIATLKEKDLDFELVPVNMQAGDHKKEPFITLNPFGQVPAFEDGDLKLFESRAITQYIAHTYADKGNQLLANDPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKS-LFDSRPHVSAWCADILARPAWSKAIE 209          
BLAST of DY257328 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 163.31 bits (412), Expect = 1.477e-39
Identity = 85/201 (42.29%), Postives = 123/201 (61.19%), Query Frame = 2
Query:   80 RIIFCLVDKEF*FETDPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRY--YAEKYRSQGTELLGKTIEERGVVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYL-AGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLEL*K 673
            R++  L +K   FE  P+D+  G  + P YL L PFG++P ++DG+  L+ESRAI +Y  Y   ++++GT L+ K   E      W EVEAH ++P   +L  +L+F   FG   D  +V+E++ KL K LDVYE RL++S+YL A D F+L DL H+P   YL+G   ++ +  +R HVSAW   I  RPSW+K L L K
Sbjct:   16 RVLVALYEKHLEFEFVPIDMGAGGHKQPSYLALNPFGQVPALEDGEIKLFESRAITKYLAYTHDHQNEGTSLIHKEKHEMAAQLVWEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKK-LFEERAHVSAWCKKILARPSWEKTLALQK 215          
BLAST of DY257328 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.477e-39
Identity = 82/195 (42.05%), Postives = 118/195 (60.51%), Query Frame = 2
Query:   80 RIIFCLVDKEF*FETDPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGVVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLE 664
            R+  CL++K+  FE  PVD++ GE +   YL L PFG++P  +DGD  L+ESRAI +Y A  Y   G +L+ +  ++  ++  W+EVE   + P   +LT +L      G   D+  VKES+ +L K LD+YE RL++SKYL GD F+L DL HIP  +YL+    ++ +   R  VSAW  DI  RP+W K LE
Sbjct:   16 RVAACLIEKDLDFELVPVDMVSGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKE-VFDSRPRVSAWCADILARPAWVKGLE 209          
BLAST of DY257328 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.519e-39
Identity = 88/205 (42.93%), Postives = 122/205 (59.51%), Query Frame = 2
Query:   56 FSPYSSDG--RIIFCLVDKEF*FETDPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGK-TIEERGVVEQWLEVEAHNYNPAIYELTIQLLFSSKF-GRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKV 658
            F P  S    R++ CL +    +E   VD    E +SPE+LK  PFG++P  QDGD  L+ESRAI +Y   KY+++  +LL +  + E  +V+ W EVE H YN AI  +  + + +    G P ++K+V ES EKL K L+VYE RLS+S YLAGDF S ADL+H P+T Y +G      +     HV AWW+ +  RPS KK+
Sbjct:    7 FGPAQSTNVARVLLCLEEVGAEYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMG-TPYASLFDSYPHVKAWWERLMARPSVKKL 210          
BLAST of DY257328 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 161.77 bits (408), Expect = 4.297e-39
Identity = 82/199 (41.21%), Postives = 122/199 (61.31%), Query Frame = 2
Query:   80 RIIFCLVDKEF*FETDPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEE-RGVVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLEL*K 673
            R++  L +K+  FE  PVD+  G  +   +L L PFG++P ++DGD  L+ESRAI +Y AE+Y  +G +L+ +  ++ +     WL+VE   ++P   +L  + +F   FG   D   V+E + KL K LDVYE RL+KS++LAGD F+LADL H+P  HYL+G   +  +   R  VS W   IS RP+W KV++L K
Sbjct:   65 RVLATLYEKDLQFELIPVDMRAGAHKQEAHLALNPFGQIPALEDGDLTLFESRAITQYLAEEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKV-LFDSRPKVSEWIKKISARPAWAKVIDLQK 262          
BLAST of DY257328 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.633e-38
Identity = 82/195 (42.05%), Postives = 116/195 (59.49%), Query Frame = 2
Query:   80 RIIFCLVDKEF*FETDPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGVVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLE 664
            R+  CL++KE  FE  PVD+  GE +   YL L PFG++P  +DGD  L+ESRAI +Y A  Y   G +L+ +  ++   +  W+EVE   + P   +LT +L      G   D+  VKES+ +L K LD+YE +L++SKYL GD F+L DL HIP  +YL+    ++ +   R  VSAW  DI  RP+W K LE
Sbjct:   16 RVAACLIEKELDFEFVPVDMASGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPSMSVWMEVEGQKFEPPATKLTWELGIKPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKE-VFDSRPRVSAWCADILARPAWVKGLE 209          
BLAST of DY257328 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 6.204e-38
Identity = 84/189 (44.44%), Postives = 118/189 (62.43%), Query Frame = 2
Query:  116 FETDPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGVVEQWLEVEAHNYNPAIYELTIQLLFSSK-FGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLEL*KTP 679
            +E  P+D  KGE ++P++L   PFG++P +QDGD  L+ESRAI +Y   K + +   L    ++E  +V+ WLEVE++ Y PA+  +  Q L     FG P DEK+V+E+ EKL K L+VYE RL+K KYLAGD+ S+ADLSH+  T   +G      ++    HV AWW D+  RPS +KV  L K P
Sbjct:   29 YEIVPLDFSKGEHKAPDHLARNPFGQVPALQDGDLFLWESRAICKYVCRKNKPE--LLKDGDLKESAMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGT-VCLGATPHASVLDAYPHVKAWWTDLMARPSSQKVASLMKPP 214          
BLAST of DY257328 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 157.532 bits (397), Expect = 8.103e-38
Identity = 83/194 (42.78%), Postives = 116/194 (59.79%), Query Frame = 2
Query:   80 RIIFCLVDKEF*FETDPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGVVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 661
            R+   L +K   FE  PVDL  G  + P++L L PFG++P + DGD +L+ESRAI RY A KY S+GT+LL  T      +E WLEVE+H+++P    L  QLL     G   D  +V++  E+L K LDVYE  L+++KYLAGD F+LAD +H            R   +  R HV AWW+ I+ RP+++K +
Sbjct:   17 RVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIASKYASEGTDLLPAT-ASAAKLEVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAIAARPAFQKTV 209          
The following BLAST results are available for this feature:
BLAST of DY257328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
GSTF3_ARATH1.323e-7261.65Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF7_ARATH7.066e-5046.94Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF_HYOMU4.590e-4141.54Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF_SILCU1.477e-3942.29Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF2_TOBAC1.477e-3942.05Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF1_ORYSJ2.519e-3942.93Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF6_ARATH4.297e-3941.21Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF1_TOBAC1.633e-3842.05Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF2_ORYSJ6.204e-3844.44Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF3_MAIZE8.103e-3842.78Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAK2AB04FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257328 ID=DY257328; Name=DY257328; organism=Citrus sinensis; type=EST; length=821bp
GGTCATTACTTTTATTAGCTAATAATTTGATACAACTTGGGTGATTATCT
TGTTTTTTTCCCCTTATTCTTCTGACGGACGAATAATTTTTTGCTTGGTT
GACAAGGAATTCTGATTTGAAACTGACCCCGTTGATCTCATCAAAGGAGA
GCAGAGAAGTCCTGAGTACCTCAAATTACAGCCTTTTGGAGAGCTTCCTG
TCATTCAAGATGGAGATTTTATTTTATACGAGTCGCGAGCTATCATGAGG
TACTATGCCGAAAAGTACAGGTCTCAAGGAACCGAACTTCTGGGTAAAAC
AATTGAAGAAAGAGGCGTGGTGGAACAGTGGCTAGAAGTAGAGGCACACA
ACTACAACCCAGCAATTTACGAGCTGACCATCCAACTTTTATTTTCCTCC
AAGTTTGGACGTCCCGTTGATGAAAAATTGGTGAAGGAGAGTGACGAAAA
GCTTGGAAAAACGCTCGACGTTTACGAGGAGAGGCTGTCGAAGAGCAAGT
ATTTGGCTGGTGATTTCTTCAGCCTCGCTGATCTGAGTCACATTCCATTT
ACCCACTACTTGGTTGGGCCGATGGGGAGACAGCATATGATTAGAGACAG
GAAGCATGTGAGTGCTTGGTGGGATGATATTAGCAACAGGCCGTCCTGGA
AAAAAGTCCTTGAGCTTTGAAAGACTCCTTTCGGCTGAGCTTGATTGTAT
GTGTTTCAATTTTCGGGCTTGTGTTCTACTTCACCACTACTTTGGTTTGT
TCTTGGCGGTGGGAAATGTTCCTTGGATAAGGGGTCTCCAATAAATAATT
GTTTGGAGTTGGACTTTTTTT
back to top