DY257322

Overview
NameDY257322
Unique NameDY257322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257322 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 8.221e-76
Identity = 141/248 (56.85%), Postives = 185/248 (74.60%), Query Frame = 2
Query:    2 GLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG-KQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDP---DLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELI*KEIGGMISVEE 730
            GL+ YR E+L   RGNG G+R+  DR+YDYDVYNDLG+PD   +LARPVLGG KQ PYPRRCRTGRP    D  SE R+GN YVPRDE FSEVK   F  KT+ SVLHA VP+ ++A +D    +L FP F  ID LF +GV LP +++ GF ++++PRL++ + D+ GD ILLF+TP  + +DKF W RDEEF+R+TLAG+NPY+I L+ E+PLKS LDP +YGP ESAIT +L+ +++  +++VEE
Sbjct:  251 GLRSYREEDLKQKRGNGAGQREADDRVYDYDVYNDLGNPDSNGDLARPVLGGSKQFPYPRRCRTGRPPSKKDPKSETRKGNVYVPRDEEFSEVKNAQFLLKTLQSVLHAAVPAAQSALIDNLSLNLPFPSFFVIDKLFEDGVELPGVEKLGFLHSIVPRLLELLRDSPGDKILLFDTPANVQKDKFAWLRDEEFARETLAGINPYAIELVREFPLKSKLDPAVYGPAESAITADLLEEQMRRVMTVEE 498          
BLAST of DY257322 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 6.741e-70
Identity = 131/246 (53.25%), Postives = 173/246 (70.33%), Query Frame = 2
Query:    5 LKRYRAEELTILRGNGQ---GERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGN-FYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELI*KEIGGMISVEE 730
            LK+YR EEL  L+G  +   GE   ++RIYDYDVYND+GDPD  PELARPV+GG  +PYPRRC+TGR  C+TD  SE+R G  FYVPRDE FS  K  +F+ K V + L ++ P +E+  + P   FP+F AI  LF EG+ LP  K  G    LLPR++KA+ +  D+IL F+ P  ++RD+F W RD+EF+RQTLAGLNPYSI+L+ EWPL S LDP +YG P S IT E++ +E+ G ++V+E
Sbjct:  212 LKKYRKEELETLQGKNREEVGEFTKFERIYDYDVYNDVGDPDNDPELARPVIGGLTHPYPRRCKTGRKPCETDPSSEQRYGGEFYVPRDEEFSTAKGTSFTGKAVLAALPSIFPQIESVLLSPQEPFPHFKAIQNLFEEGIQLP--KDAGLL-PLLPRIIKALGEAQDDILQFDAPVLINRDRFSWLRDDEFARQTLAGLNPYSIQLVEEWPLISKLDPAVYGDPTSLITWEIVEREVKGNMTVDE 454          
BLAST of DY257322 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 263.077 bits (671), Expect = 1.502e-69
Identity = 135/248 (54.44%), Postives = 176/248 (70.97%), Query Frame = 2
Query:    2 GLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG-KQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDP---DLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELI*KEIGGMISVEE 730
            GL+ YR  +L   RG+G GER+  DR+YDYDVYNDLG+PD   +LARPVLGG KQ PYPRRCRTGRP    D  SE R+GN YVPRDE FS  K+  F  KTV SVL A VP+ ++  +D    +L FP F  ID LF +GV LP + +  F  +++PRL++ + DT  + IL FETP  + +DKF W RDEEF+R+TLAG+NPY+I L+ E+PLKS LDP +YGP ESAIT +L+ +++  +++VEE
Sbjct:  234 GLRSYRKNDLQQKRGDGTGEREADDRVYDYDVYNDLGNPDSNGDLARPVLGGNKQFPYPRRCRTGRPPSKKDPKSETRKGNVYVPRDEEFSPEKEDYFLRKTVGSVLQAAVPAAQSLLLDKLKWNLPFPSFFVIDKLFEDGVELPGVDKLNFLESVVPRLLEHLRDTPAEKILRFETPANIQKDKFAWLRDEEFARETLAGINPYAIELVREFPLKSKLDPAVYGPAESAITADLLEEQMRRVMTVEE 481          
BLAST of DY257322 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 2.562e-69
Identity = 131/250 (52.40%), Postives = 178/250 (71.20%), Query Frame = 2
Query:    2 GLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEG----FWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELI*KEIGGMISVEEVYE 739
            G++  R +EL  LRG+G  ERK ++R+YDYD YNDLGDPDK  +  RPVLG K++PYPRRCRTGRP+   D  +E R    YVPRDE FS+VK  TFSA T+ S LHA++P++    ++   GF +F AIDAL+++G+ LP     G      N ++PR+V+ IEDT +++L FE PE ++RD+F WFRDEEF+RQTLAGLNP  IR +TE+P+ S LDP +YGP ESA++ E++ K + G ++VEE  E
Sbjct:  211 GIEALRKKELETLRGDGHSERKFHERVYDYDTYNDLGDPDKNIDHKRPVLGTKEHPYPRRCRTGRPKTLYDPETETRSSPVYVPRDEQFSDVKGRTFSATTLRSGLHAILPAV-APLLNNSHGFSHFPAIDALYSDGIPLPVDGHGGNSFNVINDVIPRVVQMIEDTTEHVLRFEVPEMLERDRFSWFRDEEFARQTLAGLNPICIRRLTEFPIVSKLDPAVYGPAESALSKEILEKMMNGRMTVEEAME 459          
BLAST of DY257322 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.707e-60
Identity = 130/261 (49.81%), Postives = 165/261 (63.22%), Query Frame = 2
Query:    2 GLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPE-LARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKR--EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEG--------FWNTLLPRLVK----AIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELI*KEIGGMISVEEVYE 739
            G++  R  EL ILRG G GERK +DRIYDYDVYNDLG+PD       RPVLGGK++PYPRRCRTGRPR   D FSE+R  + + YVPRDEAF+E K   F  K   S LHAL   L+TA       FP  SAID L+++     P++ EG           T L  L K    A  +    +  FETPE  DRDKF WFRDEEF+RQT+AG+NP SI+L+TE+P+KS LD   YGP +S IT E++ ++I  +++ +E  +
Sbjct:  229 GVEGLRKRELEILRGTGCGERKEHDRIYDYDVYNDLGNPDDDNNPTTRPVLGGKEHPYPRRCRTGRPRSKKDPFSEERSHKEHIYVPRDEAFTERKMGAFDTKKFMSQLHALTTGLKTA-KHKSQSFPSLSAIDQLYDDNFRNQPVQPEGGKLRFVIDLLETELLHLFKLEGAAFLEGIRRVFKFETPEIHDRDKFAWFRDEEFARQTIAGMNPMSIQLVTEFPIKSNLDEATYGPADSLITKEVVEEQIRRVMTADEAVQ 488          
BLAST of DY257322 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.193e-58
Identity = 119/251 (47.41%), Postives = 168/251 (66.93%), Query Frame = 2
Query:    2 GLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGN---FYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLP-PLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPP-ESAITTELI*KEIGGMISVEEVYE 739
            GL+  R +EL  LRGNG+GERK  DRIYDYDVYND+G+PD   ELARP LGG++ PYPRRCRTGR   DTD  SE+R       YVPRDE F E KQ TF+A  + +VLH L+PSL+ + +  D  F  F  ID+L+ EG+ L    + + F    LP++V  ++ + + +L ++TP+ + +DK+ W RD+EF+RQ +AG+NP +I  +T +P  S LDP+IYGP   SA+T + I  ++ G ++V++  E
Sbjct:  240 GLRTLREKELENLRGNGKGERKLSDRIYDYDVYNDIGNPDISRELARPTLGGREFPYPRRCRTGRSSTDTDMMSERRVEKPLPMYVPRDEQFEESKQNTFAACRLKAVLHNLIPSLKASILAED--FANFGEIDSLYKEGLLLKLGFQDDMFKKFPLPKIVTTLQKSSEGLLRYDTPKIVSKDKYAWLRDDEFARQAIAGINPVNIERVTSYPPVSNLDPEIYGPGLHSALTEDHIIGQLDG-LTVQQALE 487          
BLAST of DY257322 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.193e-58
Identity = 129/260 (49.62%), Postives = 165/260 (63.46%), Query Frame = 2
Query:    2 GLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEK---REGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDL--GFPYFSAIDALFNEGVNLPPLKQEG-----FWNTLLPRLVKAIEDTGDN-------ILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELI*KEIGGMISVEE 730
            G+++ R  EL  LRGNG GERK +DRIYDYDVYNDLG    KPE  RPVLGGK++PYPRRCRTGRPR  TD  SE+   ++G  YVPRDE F+E K+  F  K + S LH L   L+   V+ D+   FP  ++IDAL+++     P++ EG       + L   LV  ++  G         +  FETPE  D DK  WFRDEEF+RQTLAG+NP SI+L+TE P+ S LD   YGP +S IT ELI K+I  +++ EE
Sbjct:  232 GVEKLRKSELEALRGNGCGERKKHDRIYDYDVYNDLG----KPESKRPVLGGKEHPYPRRCRTGRPRSKTDPSSEEESHKKGEMYVPRDETFTERKEQAFLTKQLLSQLHGLCTGLK---VNKDILPSFPTLASIDALYDDDFRNQPVQPEGGKVRLILDLLAKELVHLVKLEGAEFVEGIRRVFKFETPEIHDMDKLAWFRDEEFARQTLAGMNPLSIQLVTELPIVSKLDELKYGPADSLITKELIEKQINRIMTAEE 484          
BLAST of DY257322 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 1.234e-55
Identity = 114/241 (47.30%), Postives = 153/241 (63.49%), Query Frame = 2
Query:    2 GLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGN---FYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELI*KEIGGM 715
            GL+  R +EL  LRG+G G RK  DRIYDY  YNDLG+PDK  E  RP+LGG++ PYPRRCRTGRP  DT+  +E R       YVPRDEAF E+KQ  FS+  + +VLH L+PSL  +       F  F  ID L+ EG+ L    QE  +  +   LV+ I+++ + +L ++TP  + +DKF W RD+EF+RQ +AG+NP +I  +  +P  S LDP IYGPPES+IT   I   + G+
Sbjct:  230 GLRELREKELKDLRGDGTGVRKLSDRIYDYATYNDLGNPDKGKEFIRPILGGEKIPYPRRCRTGRPPTDTNMLAESRVEKPHPIYVPRDEAFEELKQGAFSSGRLRAVLHTLIPSLIASISAETHNFQGFHHIDNLYKEGLRLKLGLQEHLFQKI--PLVQKIQESSEGMLRYDTPSILSKDKFAWLRDDEFARQAVAGINPVNIERLQVFPPVSKLDPAIYGPPESSITETHIAGHLNGL 468          
BLAST of DY257322 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 3.361e-53
Identity = 116/250 (46.40%), Postives = 154/250 (61.60%), Query Frame = 2
Query:    2 GLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKR---EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDL-GFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELI*KEIGGMISVEEVYE 739
            GL+  R  EL  LRG+G GER+  DR+YDYDVYNDLG+PDK    ARPVLGG+Q PYPRR RTGRP   TD  +E R       YV RDE F E K    S   + ++LH  +P L ++ V PD+  F  F  +D LF EG+ L     +  +  +    V+ I++  + +L ++TP+ + +DKF W RD+EF+RQ LAG+NP +I  +  +P  S LDP +YGPPESAIT E I   + GM SV+E  E
Sbjct:  216 GLRELRLRELADLRGDGTGERRITDRVYDYDVYNDLGNPDKGVASARPVLGGEQMPYPRRMRTGRPSTATDASAESRVEYPEPIYVSRDEEFEEGKNEMLSEGAIKALLHNFMPLLVSS-VSPDIRDFAGFHDVDNLFKEGLRLKQALHDQLFQKI--PFVRKIQENSEGLLRYDTPDIIKKDKFAWLRDDEFARQALAGINPVNIERLQAFPPVSKLDPAVYGPPESAITEEHIIGHLDGM-SVQEAVE 461          
BLAST of DY257322 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.733e-53
Identity = 111/247 (44.94%), Postives = 151/247 (61.13%), Query Frame = 2
Query:    2 GLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKR---EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQE---------GFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELI*KEI 706
            G+K  R ++L  +RG+G+GERK ++RIYDYDVYNDLGDP +K E  RPVLG  + PYPRRCRTGRP    D   E R   +  FYVPRDE F E+K+ TF A    ++ H LVPS+  A  + D+ F  FS ID L+   + L   + +         GF N +L        +  + +L ++TP  +  D+F W RD EF RQ LAG+NP +I L+ E P++S LDP +YGP ES +T E+I +E+
Sbjct:  228 GIKELREKDLVSVRGDGKGERKPHERIYDYDVYNDLGDP-RKTERVRPVLGVPETPYPRRCRTGRPLVSKDPPCESRGKEKEEFYVPRDEVFEEIKRDTFRAGRFKALFHNLVPSIAAALSNLDIPFTCFSDIDNLYKSNIVLGHTEPKDTGLGGFIGGFMNGIL--------NVTETLLKYDTPAVIKWDRFAWLRDNEFGRQALAGVNPVNIELLKELPIRSNLDPALYGPQESVLTEEIIAREV 465          
The following BLAST results are available for this feature:
BLAST of DY257322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOXC2_ORYSJ8.221e-7656.85Probable lipoxygenase 8, chloroplastic OS=Oryza sa... [more]
LOX2_ARATH6.741e-7053.25Lipoxygenase 2, chloroplastic OS=Arabidopsis thali... [more]
LOXC1_ORYSJ1.502e-6954.44Lipoxygenase 7, chloroplastic OS=Oryza sativa subs... [more]
LOX23_HORVU2.562e-6952.40Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare... [more]
LOX21_HORVU3.707e-6049.81Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare... [more]
LOX4_ARATH1.193e-5847.41Lipoxygenase 4, chloroplastic OS=Arabidopsis thali... [more]
LOX22_HORVU1.193e-5849.62Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare... [more]
LOX6_ORYSJ1.234e-5547.30Probable lipoxygenase 6 OS=Oryza sativa subsp. jap... [more]
LOX5_ORYSJ3.361e-5346.40Putative lipoxygenase 5 OS=Oryza sativa subsp. jap... [more]
LOX6_ARATH5.733e-5344.94Lipoxygenase 6, choloroplastic OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAK2AA03FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257322 ID=DY257322; Name=DY257322; organism=Citrus sinensis; type=EST; length=873bp
CGGATTGAAGAGATATAGAGCTGAGGAGCTTACCATTTTGCGAGGTAATG
GACAAGGAGAGCGCAAAACCTATGATAGAATCTATGATTATGATGTCTAC
AATGATCTTGGAGATCCAGACAAGAAACCTGAATTAGCAAGGCCTGTGCT
TGGAGGCAAACAAAACCCTTATCCTAGACGTTGCAGAACTGGACGCCCAC
GGTGTGACACAGATCAATTTTCGGAGAAAAGAGAGGGAAACTTTTATGTT
CCAAGGGATGAAGCATTCTCGGAGGTAAAGCAGCTAACATTTTCAGCAAA
GACGGTGTACTCAGTGTTGCATGCGTTGGTACCATCCTTAGAAACCGCCT
TTGTCGATCCTGATCTGGGGTTTCCATACTTCTCTGCTATTGACGCACTC
TTCAATGAAGGAGTCAACTTGCCTCCACTCAAACAGGAAGGTTTTTGGAA
CACACTGCTTCCCAGATTGGTTAAGGCAATTGAGGATACAGGAGATAATA
TTTTGCTGTTTGAGACGCCAGAAACAATGGACAGAGACAAATTCTTTTGG
TTTAGGGATGAGGAATTTTCTAGGCAAACTCTCGCTGGTCTCAACCCGTA
TAGCATAAGGTTGATCACGGAATGGCCGTTGAAAAGCACACTCGATCCTG
ATATTTACGGACCACCAGAATCAGCAATTACCACAGAATTGATTTGAAAA
GAAATTGGAGGAATGATTTCTGTTGAAGAGGTATACGAATGATCATTCTG
AAATATAAATCAACAAGAAAAAGTGACCCACAATTATTTCCTTTCAGTCA
ATTAATTTGAAACAATATGTTTTATGCAGGCTATTAAACAAAAGAGTTTG
TCCTCTTAAATTAAAAAAAAAAA
back to top