DY257321

Overview
NameDY257321
Unique NameDY257321
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1268
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY257321 vs. ExPASy Swiss-Prot
Match: MYOH_DICDI (Myosin-H heavy chain OS=Dictyostelium discoideum GN=myoH PE=4 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.094e-11
Identity = 41/133 (30.83%), Postives = 77/133 (57.89%), Query Frame = 2 
Query:  224 DNIIKFLDSLMRRLR-EN-HVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLAELEKWI-VSAKEEFAGTSWHELNYIRQAVGFLVIHQKRKKSLDEIRQDLCPALTVRQIYRICTMYWDD 613
            D I  +L+ +   L  EN ++ +   + L  Q+FSFIN  +FN +LLR++ C   +   +K  ++ELE W+ +   +E++ +   +L  +++ V  L+I  K +   DE+R ++CP L++ Q+ ++ TMY  D
Sbjct: 1542 DPITNYLNQIQISLSLENCYINNNLCKLLFEQLFSFINAMIFNEILLRKDLCCLRSSIPIKMNISELEHWVKLHHGKEWSSSVCDKLRLLKEVVYILMI-DKTQLQNDELRDEICPTLSIAQLKQLLTMYSPD 1673
The following BLAST results are available for this feature:
BLAST of DY257321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MYOH_DICDI1.094e-1130.83Myosin-H heavy chain OS=Dictyostelium discoideum G... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK2AA02FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257321 ID=DY257321; Name=DY257321; organism=Citrus sinensis; type=EST; length=1268bp
GGGAAGGCTTTCCTTTTGTTCAATCTGCATATCCAACAAAACTATTAAAC
AACAATTAAGTGCTTGTGTAAAGAAAATCTTTGGCTTGATTCGTGACAAT
TTAAAGAAAGAATTGTCTCCACTATTGGGTTCATGCATCCAGGTGCCCAA
AACTGCACGAGTACATGCTGGAAAATTATCTAGATCACCAGGTGTTCAGC
AGCAATCACATACTAGTCAGTGGGACAACATCATCAAATTTTTGGATTCT
CTTATGAGACGTTTGCGTGAGAATCATGTACCTTCCTTTTTCATCCGTAA
GCTCATTACCCAGGTTTTCTCTTTCATCAATATATCTCTTTTCAACAGTC
TGCTCCTGCGACGTGAATGTTGCACATTCTCAAATGGGGAATATGTGAAA
TCTGGTTTGGCAGAGCTAGAGAAATGGATAGTCAGTGCAAAGGAGGAGTT
TGCAGGAACTTCTTGGCACGAGCTAAATTATATTAGACAAGCAGTTGGAT
TTCTGGTAATACATCAGAAGAGAAAAAAGTCTTTGGATGAGATTCGACAG
GATTTATGTCCGGCATTGACGGTTAGGCAAATATATCGAATATGTACTAT
GTACTGGGATGACAAATATGGCACACAGAGTGTATCAAATGAGGTGGTTG
CTCAAATGAGAGAGATCTTGAACAAGGACAATCATAATCTATCATCAAAT
TCATTCTTGCTGGATGATGATCTAAGCATTCCTTTCTCAACAGAAGATAT
AGATATGGCGATTCCTGTAACAGATCCTGCAGATACTCACATTCCAGCAT
TTTTATCTGAATATCCTTGTGCACAATTTCTGGTCCAGCATGAGAAGTAA
ATAATGTGAAGGGTTACCTTGTTCCAAAAAATGTTATGGATAAACTTCAA
GTCCAGCATTTTTCAGAAGGGTGAAGCTTTGTATAAGGGCTAAAAATCCA
GGCTTGCAGATAATGAATTATTTTTCACACTTTGGATGGAAAACCCCGGG
TGGTTGAAAATTTGCCAGTTAACTTCTAAATTTGATTTTGTGAATATGGT
AATGGAAATTTTCACAAAAGGAATCCGCCGGGGCGGCTTATACGGGAAAG
GAAAGGGGAATTTCCTTATACCCCCCTGTGAGGTTTAACCCACATATAAA
TAGAGGAAAAGCAAAAAAAAAAACTGTGGAGGGGAGGCGCCCCTTGTTTT
TTTTTTTTAAAACACTTATTCCCCTCTCCCTCCTCCCTTTTTCCAAAAAT
AAAACACACCCACACTCA
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