DY257310

Overview
NameDY257310
Unique NameDY257310
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1250
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257310 vs. ExPASy Swiss-Prot
Match: AMT2_ARATH (Ammonium transporter 2 OS=Arabidopsis thaliana GN=AMT2 PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 3.385e-45
Identity = 80/120 (66.67%), Postives = 93/120 (77.50%), Query Frame = 2
Query:  374 KKKWAVNSAFMVLYAFAAMLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARVPESTHEVDGKTVTTEPFYAKATLVYFQFTFAAITVILLAGSALGPMNIKA*KAFVPLRLMFS 733
            KKKWAVNSAFM LYAFAA+L+CWVL+CY+MAFG++LLPFWGKG PA  Q YL G+A++P S            P++  ATLVYFQFTFAAIT IL+AGS LG MNIKA  AFVPL L+FS
Sbjct:   48 KKKWAVNSAFMALYAFAAVLLCWVLLCYKMAFGEELLPFWGKGGPAFDQGYLKGQAKIPNSN--------VAAPYFPMATLVYFQFTFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFS 159          

HSP 2 Score: 41.2022 bits (95), Expect = 3.385e-45
Identity = 18/35 (51.43%), Postives = 29/35 (82.86%), Query Frame = 1
Query:  277 IKKSDSA*KMTASTLVRIQNMPGLLIIYTSIKQEK 381
            + K D+A ++TA+TLV +Q+MPGL+I+Y SI ++K
Sbjct:   16 LNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKK 50          
BLAST of DY257310 vs. ExPASy Swiss-Prot
Match: AMT21_ORYSJ (Ammonium transporter 2 member 1 OS=Oryza sativa subsp. japonica GN=AMT2-1 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.378e-43
Identity = 81/120 (67.50%), Postives = 91/120 (75.83%), Query Frame = 2
Query:  374 KKKWAVNSAFMVLYAFAAMLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARVPESTHEVDGKTVTTEPFYAKATLVYFQFTFAAITVILLAGSALGPMNIKA*KAFVPLRLMFS 733
            KKKWAVNSAFM LYA+A+ L+ WVLV +RMAFGDQLLPFWGK   AL Q YLVGRA +P + H   G    TEPFY +ATLV FQF FAAIT++LLAGS LG MNIKA  AF PL L+ S
Sbjct:   50 KKKWAVNSAFMALYAYASSLLVWVLVGFRMAFGDQLLPFWGKAGVALTQSYLVGRATLPATAH---GAIPRTEPFYPEATLVLFQFEFAAITLVLLAGSVLGRMNIKAWMAFTPLWLLLS 166          

HSP 2 Score: 41.9726 bits (97), Expect = 1.378e-43
Identity = 19/35 (54.29%), Postives = 29/35 (82.86%), Query Frame = 1
Query:  277 IKKSDSA*KMTASTLVRIQNMPGLLIIYTSIKQEK 381
            + K D+A ++TASTLV IQ+MPGL+++Y SI ++K
Sbjct:   18 LNKGDNAWQLTASTLVGIQSMPGLVVLYGSIVKKK 52          
BLAST of DY257310 vs. ExPASy Swiss-Prot
Match: AMT22_ORYSJ (Ammonium transporter 2 member 2 OS=Oryza sativa subsp. japonica GN=AMT2-2 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 6.765e-41
Identity = 85/139 (61.15%), Postives = 98/139 (70.50%), Query Frame = 2
Query:  374 KKKWAVNSAFMVLYAFAAMLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARVPESTH-EVDG--KTVTTEPFYAKATLVYFQFTFAAITVILLAGSALGPMNIKA*KAFVPLRLMFS*LLVLFILRKRDFFNQ 781
            KKKWAVNSAFM LYA+A+ LI WVLV +RMAFGD+LLPFW K  PAL Q +LV RA  P + H   DG  +T  TEPFYA+A LV F+F FAAIT++LLAGS LG MNIKA  AF PL L+FS  +  F L    F  Q
Sbjct:   57 KKKWAVNSAFMALYAYASTLIVWVLVGFRMAFGDRLLPFWAKAGPALTQDFLVQRAVFPATAHYGSDGTLETPRTEPFYAEAALVLFEFEFAAITLVLLAGSLLGRMNIKAWMAFTPLWLLFSYTVGAFSLWGGGFLYQ 195          

HSP 2 Score: 38.1206 bits (87), Expect = 6.765e-41
Identity = 17/35 (48.57%), Postives = 27/35 (77.14%), Query Frame = 1
Query:  277 IKKSDSA*KMTASTLVRIQNMPGLLIIYTSIKQEK 381
            + K D+A ++ A+T V IQ+MPGL++IY SI ++K
Sbjct:   25 LNKGDTAWQLVAATFVGIQSMPGLVVIYGSIVKKK 59          

HSP 3 Score: 20.7866 bits (42), Expect = 6.765e-41
Identity = 8/15 (53.33%), Postives = 10/15 (66.67%), Query Frame = 3
Query:  222 TPPIPKTYLLDLPEV 266
            +PP P  Y+ DLP V
Sbjct:    7 SPPQPGPYMPDLPAV 21          
BLAST of DY257310 vs. ExPASy Swiss-Prot
Match: AMT33_ORYSJ (Ammonium transporter 3 member 3 OS=Oryza sativa subsp. japonica GN=AMT3-3 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.116e-39
Identity = 73/131 (55.73%), Postives = 91/131 (69.47%), Query Frame = 2
Query:  374 KKKWAVNSAFMVLYAFAAMLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARVPEST---HEVDGKTVTTEPFYAKATLVYFQFTFAAITVILLAGSALGPMNIKA*KAFVPLRLMFS*LLVLFIL 757
            KKKWA+NSAFM LYAFAA+ ICWV+  Y M+FGD+LLPFWGK  PALGQ +LV ++ +  +    H    +    +P Y  AT+VYFQ  FA+IT+I+LAGS LG MNIKA  AFVPL + FS  +  F L
Sbjct:   52 KKKWAINSAFMALYAFAAVWICWVVWAYNMSFGDRLLPFWGKARPALGQSFLVAQSELTATAIRYHNGSAEAPMLKPLYPVATMVYFQCMFASITIIILAGSLLGRMNIKAWMAFVPLWITFSYTVCAFSL 182          

HSP 2 Score: 41.5874 bits (96), Expect = 1.116e-39
Identity = 20/49 (40.82%), Postives = 33/49 (67.35%), Query Frame = 1
Query:  235 LKLIYWICQKSTTEIKKSDSA*KMTASTLVRIQNMPGLLIIYTSIKQEK 381
            + + Y     S   + K D+A +MT++TLV +Q+MPGL+I+Y SI ++K
Sbjct:    6 IPMAYQTTPSSPDWLNKGDNAWQMTSATLVGLQSMPGLVILYGSIVKKK 54          
BLAST of DY257310 vs. ExPASy Swiss-Prot
Match: AMT23_ORYSJ (Ammonium transporter 2 member 3 OS=Oryza sativa subsp. japonica GN=AMT2-3 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.667e-38
Identity = 82/139 (58.99%), Postives = 98/139 (70.50%), Query Frame = 2
Query:  374 KKKWAVNSAFMVLYAFAAMLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARVPESTH-EVDG--KTVTTEPFYAKATLVYFQFTFAAITVILLAGSALGPMNIKA*KAFVPLRLMFS*LLVLFILRKRDFFNQ 781
            KKKWAVNSAFM LYA+A+ LI WVLV +RMAFGD+LLPFWGK   AL + +LV RA VP + H   DG  ++  TEPFY +A++V FQF  AAIT++LLAGS LG MNIKA  AF PL L+FS  +  F L    F  Q
Sbjct:   53 KKKWAVNSAFMALYAYASTLIVWVLVGFRMAFGDRLLPFWGKAGAALTEGFLVARASVPATAHYGKDGALESPRTEPFYPEASMVLFQFELAAITLVLLAGSLLGRMNIKAWMAFTPLWLLFSYTVCAFSLWGGGFLYQ 191          

HSP 2 Score: 32.7278 bits (73), Expect = 2.667e-38
Identity = 13/35 (37.14%), Postives = 25/35 (71.43%), Query Frame = 1
Query:  277 IKKSDSA*KMTASTLVRIQNMPGLLIIYTSIKQEK 381
            +   D+  ++ A+T V +Q+MPGL+++Y SI ++K
Sbjct:   21 LNTGDNGWQLAAATFVGLQSMPGLVVLYGSIVKKK 55          
BLAST of DY257310 vs. ExPASy Swiss-Prot
Match: AMT31_ORYSJ (Ammonium transporter 3 member 1 OS=Oryza sativa subsp. japonica GN=AMT3-1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.698e-37
Identity = 75/128 (58.59%), Postives = 88/128 (68.75%), Query Frame = 2
Query:  374 KKKWAVNSAFMVLYAFAAMLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARVPESTHEVDG--------KTVTTEPFYAKATLVYFQFTFAAITVILLAGSALGPMNIKA*KAFVPLRLMFS 733
            KKKWAVNSAFM LYAFAA+ +CWV   Y M+FG +LLPFWGK  PALGQ +L+ +A +P++T    G        +T    P Y  AT+VYFQ  FAAIT+ILLAGS LG MNIKA   FVPL L FS
Sbjct:   55 KKKWAVNSAFMALYAFAAVWLCWVTWGYNMSFGHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVETPWVNPLYPMATMVYFQCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFS 182          

HSP 2 Score: 36.1946 bits (82), Expect = 1.698e-37
Identity = 16/35 (45.71%), Postives = 28/35 (80.00%), Query Frame = 1
Query:  277 IKKSDSA*KMTASTLVRIQNMPGLLIIYTSIKQEK 381
            + K D+A +M ++TLV +Q++PGL+I+Y SI ++K
Sbjct:   23 LNKGDNAWQMISATLVGMQSVPGLVILYGSIVKKK 57          
BLAST of DY257310 vs. ExPASy Swiss-Prot
Match: AMT32_ORYSJ (Ammonium transporter 3 member 2 OS=Oryza sativa subsp. japonica GN=AMT3-2 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.835e-36
Identity = 75/123 (60.98%), Postives = 86/123 (69.92%), Query Frame = 2
Query:  374 KKKWAVNSAFMVLYAFAAMLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARVPESTH-EVDG--KTVTTEPFYAKATLVYFQFTFAAITVILLAGSALGPMNIKA*KAFVPLRLMFS 733
            KKKWAVNSAFM LYAFAA+ ICWV   Y M+FG++LLP WGK  PAL Q  LVGRA +P + H   DG  +T   EP Y  AT+VYFQ  FAAIT+IL+AGS LG M+  A   FVPL L FS
Sbjct:   56 KKKWAVNSAFMALYAFAAVWICWVTWAYNMSFGEKLLPIWGKARPALDQGLLVGRAALPATVHYRADGSVETAAVEPLYPMATVVYFQCVFAAITLILVAGSLLGRMSFLAWMIFVPLWLTFS 178          

HSP 2 Score: 33.4982 bits (75), Expect = 1.835e-36
Identity = 12/35 (34.29%), Postives = 27/35 (77.14%), Query Frame = 1
Query:  277 IKKSDSA*KMTASTLVRIQNMPGLLIIYTSIKQEK 381
            + K D+A ++ A+T+V +Q++PGL+++Y  + ++K
Sbjct:   24 LNKGDNAWQLVAATVVGLQSVPGLVVLYGGVVKKK 58          
The following BLAST results are available for this feature:
BLAST of DY257310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
AMT2_ARATH3.385e-4566.67Ammonium transporter 2 OS=Arabidopsis thaliana GN=... [more]
AMT21_ORYSJ1.378e-4367.50Ammonium transporter 2 member 1 OS=Oryza sativa su... [more]
AMT22_ORYSJ6.765e-4161.15Ammonium transporter 2 member 2 OS=Oryza sativa su... [more]
AMT33_ORYSJ1.116e-3955.73Ammonium transporter 3 member 3 OS=Oryza sativa su... [more]
AMT23_ORYSJ2.667e-3858.99Ammonium transporter 2 member 3 OS=Oryza sativa su... [more]
AMT31_ORYSJ1.698e-3758.59Ammonium transporter 3 member 1 OS=Oryza sativa su... [more]
AMT32_ORYSJ1.835e-3660.98Ammonium transporter 3 member 2 OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK1DG08FM2 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257310 ID=DY257310; Name=DY257310; organism=Citrus sinensis; type=EST; length=1250bp
GCTTTTATCTGTATACTGTGCAATGGTTTGCCCATAACATATATAATCAA
TTTAATCAAGATTAAATAACGTATCTCACTTCAAAAAATAAAACGAAATG
GAATAAATCTAAAAGATAATATACTGAATGCTGATCATTTCAATTGTATT
TTTTATTTTTTTTTCTTTTTCTAAAATTACCATATTTTAAAAAACTTTTG
CATCAATCTTGTTCCCGGCCAACTCCTCCAATTCCTAAAACTTATCTATT
GGATCTGCCAGAAGTCCACAACTGAAATCAAAAAAAGTGACAGTGCATGA
AAAATGACAGCATCAACACTCGTCAGAATCCAAAACATGCCGGGTCTCCT
TATCATATACACCAGCATCAAACAAGAAAAAGTGGGCAGTCAACTCAGCC
TTCATGGTGCTCTATGCCTTTGCTGCCATGCTCATTTGCTGGGTCCTTGT
ATGCTATCGCATGGCTTTTGGTGACCAACTGCTCCCTTTCTGGGGCAAGG
GCGCCCCTGCTCTAGGCCAAAAGTACCTTGTTGGTCGAGCCAGAGTCCCA
GAAAGCACCCACGAAGTTGATGGCAAAACTGTGACCACTGAACCTTTCTA
TGCTAAGGCTACACTTGTGTATTTTCAGTTCACTTTTGCTGCGATCACGG
TTATTTTGCTAGCCGGCTCCGCTCTTGGTCCAATGAATATCAAGGCCTGA
AAGGCCTTTGTGCCATTAAGGCTCATGTTTTCTTAACTGTTAGTGCTTTT
TATCCTTAGGAAGAGGGATTTCTTTAATCAATAGGTGTCCATTATATAAT
TAGAGGGCAAAGGAACAAACAAACCCGCTAAACTTTATGTCAACACAACA
AAAAAAAGGTTATAACCCCAAACCTCAGAATAACCACAAGATGCATACTA
CAAGTAATCGACTCTCCCCCTACTACGATCAGAAAAAGAAACTTGAATCG
AACAATCACAAATCGCATCACCGAAACAAGCACAATAGACCCCCTCAACA
ACCCAAACATATAAACACTACACCCCACCTTACTCATACTAAAAACACAT
AACCCACTATAACACATTAAATCTAAAACTATTAGAAAATCAAACTGGAC
ATATAATAAAAGACAATATACAAATAAACTTCTACACCTAAAAAACAAAA
TTATATTAAACAAAATACTCTTAAACTTCAATCAATCCTCTTCCATCTAT
CTATTCTACATACCACCACACCAAATACACTCACCCATCCATACTCCCCC
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