DY257243

Overview
NameDY257243
Unique NameDY257243
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1281
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5120 contig Csv1_Contig5120:550..1830. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257243 vs. ExPASy Swiss-Prot
Match: PP1_ORYSJ (Serine/threonine-protein phosphatase PP1 OS=Oryza sativa subsp. japonica GN=Os03g0268000 PE=2 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 3.892e-65
Identity = 112/136 (82.35%), Postives = 129/136 (94.85%), Query Frame = 1
Query:    1 LCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKF 408
            LCMHGGLSPDL +L++I+SLPRPTDVP++GLLCDLLWSDP  D++GW  NDRGVSY FGAD+V+EFL+KHDL+LICRAHQVVEDGYEFFA+R+L+TIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA++K KF
Sbjct:  181 LCMHGGLSPDLTHLDEIKSLPRPTDVPDTGLLCDLLWSDPGKDVQGWGMNDRGVSYTFGADKVSEFLEKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAERKGKF 316          
BLAST of DY257243 vs. ExPASy Swiss-Prot
Match: PP12_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Nicotiana tabacum GN=NPP2 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 2.523e-64
Identity = 108/136 (79.41%), Postives = 126/136 (92.65%), Query Frame = 1
Query:    1 LCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKF 408
            LCMHGGLSPDL +L++IR+LPRPTD+P+SGLLCDLLWSDPS ++KGW  NDRGVSY FG+D+V EFL +HD++L+CRAHQVVEDGYEFFA R+L+TIFSAPNYCGEFDNAGAMMSVDE LMCSFQILKP D+KP+F
Sbjct:  174 LCMHGGLSPDLTDLDEIRNLPRPTDIPDSGLLCDLLWSDPSREVKGWGMNDRGVSYTFGSDKVAEFLMQHDMDLVCRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPTDRKPRF 309          
BLAST of DY257243 vs. ExPASy Swiss-Prot
Match: PP11_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Nicotiana tabacum GN=NPP1 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 3.295e-64
Identity = 110/136 (80.88%), Postives = 125/136 (91.91%), Query Frame = 1
Query:    1 LCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKF 408
            LCMHGGLSP L NL+QIR+LPRPTDVP+SGLLCDLLWSDPS ++KGW  NDRGVSY FG D+V EFL +HD++L+CRAHQVVEDGYEFFA R+L+TIFSAPNYCGEFDNAGAMMSVDE+LMCSFQILKP D+KP+F
Sbjct:  181 LCMHGGLSPVLTNLDQIRNLPRPTDVPDSGLLCDLLWSDPSREVKGWGMNDRGVSYTFGPDKVAEFLMQHDMDLVCRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQILKPTDRKPRF 316          
BLAST of DY257243 vs. ExPASy Swiss-Prot
Match: PP12_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Arabidopsis thaliana GN=TOPP2 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 9.587e-64
Identity = 110/136 (80.88%), Postives = 126/136 (92.65%), Query Frame = 1
Query:    1 LCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKF 408
            LCMHGGLSPDL N+ QI+++ RPTDVP+SGLLCDLLWSDPS D+KGW  NDRGVSY FG D+V EFL K+D++LICRAHQVVEDGYEFFA+R+L+TIFSAPNYCGEFDNAGAMMSVDE+LMCSFQILKPAD+KP+F
Sbjct:  176 LCMHGGLSPDLTNVEQIKNIKRPTDVPDSGLLCDLLWSDPSKDVKGWGMNDRGVSYTFGPDKVAEFLIKNDMDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQILKPADRKPRF 311          
BLAST of DY257243 vs. ExPASy Swiss-Prot
Match: PP14_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 4 OS=Arabidopsis thaliana GN=TOPP4 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 2.789e-63
Identity = 108/136 (79.41%), Postives = 125/136 (91.91%), Query Frame = 1
Query:    1 LCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKF 408
            LCMHGGLSPDL +L++IR+LPRPT +P++GLLCDLLWSDP  D+KGW  NDRGVSY FG D+V+EFL KHDL+L+CRAHQVVEDGYEFFA+R+L+T+FSAPNYCGEFDNAGAMMSVDE LMCSFQILKPA+KK KF
Sbjct:  180 LCMHGGLSPDLDHLDEIRNLPRPTMIPDTGLLCDLLWSDPGKDVKGWGMNDRGVSYTFGPDKVSEFLTKHDLDLVCRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKTKF 315          
BLAST of DY257243 vs. ExPASy Swiss-Prot
Match: PP11_ACECL (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 2.789e-63
Identity = 108/147 (73.47%), Postives = 127/147 (86.39%), Query Frame = 1
Query:    1 LCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKFSFGSTTTVKSG 441
            LCMHGGLSP+L  L QIR +PRPTDVP++GLLCDLLW+DP  D++GW  NDRGVSY FG D VTEFLQ+HDL+L+CRAHQVVEDGYEFFA R+L+T+FSAPNYCGEFDNAGA+MSVD+TLMCSFQILKP++KK KF  G  +   +G
Sbjct:  167 LCMHGGLSPELKTLEQIRRIPRPTDVPDTGLLCDLLWADPDKDVQGWGENDRGVSYTFGPDTVTEFLQRHDLDLVCRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMSVDDTLMCSFQILKPSEKKGKFMQGGNSLAGAG 313          
BLAST of DY257243 vs. ExPASy Swiss-Prot
Match: PP13_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 3 OS=Arabidopsis thaliana GN=TOPP3 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 4.758e-63
Identity = 110/152 (72.37%), Postives = 129/152 (84.87%), Query Frame = 1
Query:    1 LCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKFSFGSTTTVKSGAPPSR 456
            LCMHGGLSP+L +L++IR++PRP D+P+ GLLCDLLWSDP  DI+GW  NDRGVSY FGAD+V EFLQ HDL+LICRAHQVVEDGYEFFANR+L+TIFSAPNYCGEFDNAGAMMSVD++L CSFQILK ++KK  F FG     + G PP +
Sbjct:  167 LCMHGGLSPELKHLDEIRNIPRPADIPDHGLLCDLLWSDPDKDIEGWGENDRGVSYTFGADKVEEFLQTHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDDSLTCSFQILKASEKKGNFGFGKNAG-RRGTPPRK 317          
BLAST of DY257243 vs. ExPASy Swiss-Prot
Match: PP12_ACECL (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 4.028e-62
Identity = 107/140 (76.43%), Postives = 124/140 (88.57%), Query Frame = 1
Query:    1 LCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKFSFGS 420
            +CMHGGLSP+L +L+ IR +PRPTDVP++GLLCDLLWSDP  D+ GW  NDRGVSY FG D VT FLQKHDL+LICRAHQVVEDGYEFFA R+L+T+FSAPNYCGEFDNAGA+MSVD+TLMCSFQILKP++KK K  +GS
Sbjct:  167 ICMHGGLSPELKSLDAIRHIPRPTDVPDTGLLCDLLWSDPDKDVAGWGENDRGVSYTFGPDTVTGFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMSVDDTLMCSFQILKPSEKKGKLLYGS 306          
BLAST of DY257243 vs. ExPASy Swiss-Prot
Match: PP1_MEDVA (Serine/threonine-protein phosphatase PP1 OS=Medicago varia GN=PP1 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 6.870e-62
Identity = 107/152 (70.39%), Postives = 130/152 (85.53%), Query Frame = 1
Query:    1 LCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKFSFGSTTTVKSGAPPSR 456
            LCMHGGLSP+L NL+QIR++ RP DVP+ GLLCDLLW+DP  D++GW  NDRGVS+ FGAD+V EFL+ HDL+LICRAHQVVEDGYEFFA R+L+T+FSAPNYCGEFDNAGAMMSVD++L CSFQILK +DKK K  FG+ ++ + G PP +
Sbjct:  167 LCMHGGLSPELKNLDQIRNIARPIDVPDHGLLCDLLWADPDKDLEGWGENDRGVSFTFGADKVVEFLEHHDLDLICRAHQVVEDGYEFFAKRKLVTVFSAPNYCGEFDNAGAMMSVDDSLTCSFQILKSSDKKGKVGFGNNSS-RPGTPPHK 317          
BLAST of DY257243 vs. ExPASy Swiss-Prot
Match: PP1B_XENTR (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Xenopus tropicalis GN=ppp1cb PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 1.172e-61
Identity = 105/149 (70.47%), Postives = 126/149 (84.56%), Query Frame = 1
Query:    4 CMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKFSFGSTTTVKSGAPP 450
            C HGGLSPDL ++ QIR + RPTDVP++GLLCDLLWSDP  D++GW  NDRGVS+ FGAD V++FL +HDL+LICRAHQVVEDGYEFFA R+L+T+FSAPNYCGEFDNAG MMSVDETLMCSFQILKP++KK K+ +G   + +   PP
Sbjct:  170 CCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRPVTPP 318          
The following BLAST results are available for this feature:
BLAST of DY257243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
PP1_ORYSJ3.892e-6582.35Serine/threonine-protein phosphatase PP1 OS=Oryza ... [more]
PP12_TOBAC2.523e-6479.41Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP11_TOBAC3.295e-6480.88Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PP12_ARATH9.587e-6480.88Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP14_ARATH2.789e-6379.41Serine/threonine-protein phosphatase PP1 isozyme 4... [more]
PP11_ACECL2.789e-6373.47Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PP13_ARATH4.758e-6372.37Serine/threonine-protein phosphatase PP1 isozyme 3... [more]
PP12_ACECL4.028e-6276.43Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP1_MEDVA6.870e-6270.39Serine/threonine-protein phosphatase PP1 OS=Medica... [more]
PP1B_XENTR1.172e-6170.47Serine/threonine-protein phosphatase PP1-beta cata... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK1CF10FM2 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257243 ID=DY257243; Name=DY257243; organism=Citrus sinensis; type=EST; length=1281bp
CTCTGCATGCATGGTGGACTTTCCCCTGACTTGCACAATTTGAACCAGAT
AAGGAGTTTACCTCGACCTACTGATGTCCCAGAAAGTGGTTTGCTCTGCG
ATCTCCTATGGTCGGATCCCAGTAACGACATTAAAGGTTGGGAAGCAAAT
GATAGAGGAGTTTCATATGTCTTTGGTGCTGATAGAGTGACAGAGTTTCT
TCAGAAGCACGATCTCGAGTTAATTTGTCGGGCCCACCAGGTTGTGGAAG
ATGGATATGAATTTTTTGCTAATAGACGGCTCATAACTATATTTTCAGCA
CCTAATTACTGTGGAGAGTTTGACAATGCTGGTGCAATGATGAGCGTGGA
TGAGACACTAATGTGTTCTTTTCAGATATTAAAGCCTGCAGATAAGAAGC
CAAAGTTCAGTTTTGGGAGCACGACTACAGTTAAGTCAGGTGCTCCTCCA
AGTAGAATGAAGTCGTTTCTTGGTGCAAAGGTTTAATAAGCTTGATCTAA
AATGGAGCTTTCTGAAGAAAGTAGCTGTATTAGATCAATGATGTATAGAA
CATCACGAGAAATAGCAATCTAACAAATCTGGGTTCCAATAGTACGTCCC
AACGAGGCAAACCGTTGGTGTTGTCAACCTTGTTGAGCAGCAGAGGATAA
AGGATGTTCCTCCAGAAAATTTTTTCGGAAGATGTTATCTTTTTTTTGTT
TTGCTCACCCTCTGTACATTATGAGTGGCTCCCAAGCTTGTAAGTGTGGC
CTCTCTTGACTCCTCTCTGTTCAGCTTCTTCCTTACAAGCGGTATTGTAT
CAAAATCACAGCGCAAAAAAATTTCAGGGCTTATAAAAAAAAAAAAAAAA
AACAAAAAAAAAAAAAAAAAAACACCCACTCTTCCCGTCCAAGGTGCCGT
TACCAAAAGGCATTCCTATCCTTTTTTGGCAACGAAAAAGCCCTTTTCTC
TCAAATTATATATTTTTTTTCCCTCCTGATTTTTCCCCTTACACCCTCTT
AAAAACACCCCTCTTATTTTTTTCCTGGACGTTTTGGGCCGGCCCCCACC
CACCCGCCTCTCCCCACCGCCTCCCACACCCACTATTTTAANACGGAACA
ATACCCGACTNCTAGTTGTTTGACTATGCGCCTCAGTGTATAATGTTTTA
TTTACGTAAAGCCATTAATCTATATTTCTAACATAGACTCAGTAGCCCGA
GTTCGCAGCCCTTCATAAAGAAATGATANCTATAAACACATAGAGTACCA
GTGGAAGAGCTGGANTGGAGGACGGATGTTT
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