DY257170
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257170 vs. ExPASy Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.800e-13 Identity = 33/95 (34.74%), Postives = 59/95 (62.11%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQEFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFLVQGKL 286 L++++++Y+ Y ++T +D + C LL +V F K++E LDALCD ++P +TE ++++REGDP+DEM+F+++GKL Sbjct: 437 LRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKL 531
BLAST of DY257170 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.204e-12 Identity = 32/95 (33.68%), Postives = 59/95 (62.11%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQEFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFLVQGKL 286 L+++V++Y Y +T +D + C NL+++V F ++E LDA+C+ +KP+ FTE T+++REGDP++EM+F+++G+L Sbjct: 453 LRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRL 547
BLAST of DY257170 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.878e-12 Identity = 33/95 (34.74%), Postives = 60/95 (63.16%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQEFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFLVQGKL 286 L++++++Y+ Y ++T ++ + C +LLKKV F ++E LDA+CD +KP +TE+++ IREGDP++EM+F+++GKL Sbjct: 425 LRKRIRRYEQYKWQETRGVEEENLLRNLPKDLRRDIKRHFCLDLLKKVPLFEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKL 519
BLAST of DY257170 vs. ExPASy Swiss-Prot
Match: CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12 Identity = 31/95 (32.63%), Postives = 59/95 (62.11%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQEFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFLVQGKL 286 L+++V++Y Y +T +D + C NL+++V F ++E LDA+C+ +KP+ +TE T+++REGDP++EM+F+++G+L Sbjct: 459 LRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRL 553
BLAST of DY257170 vs. ExPASy Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.094e-11 Identity = 32/95 (33.68%), Postives = 57/95 (60.00%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQEFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFLVQGKL 286 L+++V++Y Y +T +D + C L+++V F+ +++ LDA+C +KP FTE T+L+REGDP+DEM+F+++G+L Sbjct: 449 LRERVRRYDQYKWLETRGVDEEYLVQNLPKDLRRDIKRHLCLALVRRVPLFKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRL 543
BLAST of DY257170 vs. ExPASy Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.866e-11 Identity = 31/95 (32.63%), Postives = 60/95 (63.16%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQEFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFLVQGKL 286 L++++++Y+ Y ++T ++ + C +LLKKV F ++E LDA+CD ++P +TE++++IREGDP+ EM+F+++G+L Sbjct: 424 LRKRIRRYEQYRWQETRGVEEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQLLDAVCDRLRPVLYTENSYVIREGDPVGEMLFVMRGRL 518
BLAST of DY257170 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.182e-11 Identity = 31/95 (32.63%), Postives = 57/95 (60.00%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQEFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFLVQGKL 286 L+++V++Y Y +T +D + C L+++V F ++E LDA+C+ +KP FTE ++L+REGDP++EM+F+++G+L Sbjct: 465 LRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRL 559
BLAST of DY257170 vs. ExPASy Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11 Identity = 30/95 (31.58%), Postives = 57/95 (60.00%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQEFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFLVQGKL 286 L+++V++Y Y +T +D + C L+++V F ++E LDA+C+ +KP +TE ++L+REGDP++EM+F+++G+L Sbjct: 464 LRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRL 558
BLAST of DY257170 vs. ExPASy Swiss-Prot
Match: CNG15_ARATH (Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana GN=CNGC15 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11 Identity = 36/104 (34.62%), Postives = 58/104 (55.77%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQEFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFLVQGKLRHLHL*GYT 313 L+Q V+KY Y T +D + C++L+++V F +++E LDA+C+ +KP TE T L+REGDP++EM+F+++G HL YT Sbjct: 422 LRQAVRKYDQYKWLATRGVDEEALLISLPLDLRRDIKRHLCFDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRG-----HLDSYT 520 The following BLAST results are available for this feature:
BLAST of DY257170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257170 ID=DY257170; Name=DY257170; organism=Citrus sinensis; type=EST; length=871bpback to top |