DY257165
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CAF1I_ARATH (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana GN=CAF1-9 PE=2 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 6.462e-71 Identity = 149/259 (57.53%), Postives = 174/259 (67.18%), Query Frame = 3 Query: 174 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLERVF*RSSRWFSVTPFMTSNTLCGSVRTWTVGWTEWLGPWM*TGRS-GSAPWPGSETLSTWPALTKFWDGFSPPNEPEK 947 REVWA NLESEFELIS++ID YPFISMDTEFPG++++ D+ R P D Y +LK+NVDAL+LIQVGLTLSD +GNLPDLG + FIWEFNFRDFDVA DAHAPDSIELLR QGIDFERN +GV+S RFAELMMSSGLVCNE VSWVTFHSAYDFGYL+KILTRR LP L F R R + G + + + R+ G GS++L TW A + D + + PEK Sbjct: 20 REVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDL--------RFTNPDDLYTLLKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGE-FKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAFQRMRDLYFVQDGPEK 269
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CAF1K_ARATH (Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 4.189e-70 Identity = 146/259 (56.37%), Postives = 174/259 (67.18%), Query Frame = 3 Query: 174 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLERVF*RSSRWFSVTPFMTSNTLCGSVRTWTVGWTEWLGPWM*TGRS-GSAPWPGSETLSTWPALTKFWDGFSPPNEPEK 947 R+VWA NLESEF+LI +++ YPFISMDTEFPG++Y+ D+D R+ P+ Y +LKSNVDAL+LIQVGLTLSD+ GNLPDLG N ++IWEFNFRDFDV D HAPDSIELLR GIDFERNR EGV+S RFAELMMSSGL+CNESVSWVTFHSAYDFGYLVKILTRR LP L R F R F + G + + + R+ G GS++L TW A + D + + EK Sbjct: 15 RDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLD-----VLRRGNPNYLYNLLKSNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRHGIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVAL-REFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQAFQRMRDLYFVEDGAEK 267
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2) HSP 1 Score: 206.068 bits (523), Expect = 3.939e-52 Identity = 119/252 (47.22%), Postives = 154/252 (61.11%), Query Frame = 3 Query: 174 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKF-IWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLERVF*RSSRWF-SVTPFMTSNTLCGSVRTWTVGWTEWLGPWM*TGRSGSAPWPGSETLSTWPALTKFWDGF 923 REVW NLESE LI +V+D +PF++MDTEFPG+V RP T + HY+ LK+NV+ L +IQ+GLT SD GNLP G+ +NK+ IW+FNFR+FD+ +D +A DSIELLR GIDF +N E G+DS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT ++LP F S +F V C S+ G L + R G GS++L T K + F Sbjct: 13 REVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY-------HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGT--DNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYFPRVYDIKHLMKFCNSLH----GGLNKLAELLDVERVGICHQAGSDSLLTSCTFRKLQENF 251
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 9.737e-52 Identity = 99/194 (51.03%), Postives = 132/194 (68.04%), Query Frame = 3 Query: 174 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRP-DVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLERVF*RSSRWFSV 752 REVW NLE E LI Q ID +P+++MDTEFPG+V + +P+ PY + + Y LK+NV+ L LIQ+GLTLSD GNLP G+ N + IW+FNFR+F+V +D A DSIELLR ID E+N E GVD+ RFAEL+M SG+V N+ + WVTFH YDFGYL+K+L+ + LP + F + ++F V Sbjct: 17 REVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN--YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGT--NKQCIWQFNFREFNVISDMFALDSIELLRKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEISDFFDQMEKFFPV 206 HSP 2 Score: 33.4982 bits (75), Expect = 9.737e-52 Identity = 13/33 (39.39%), Postives = 21/33 (63.64%), Query Frame = 2 Query: 746 FGNTIYDVQHIMRLCQNLDSGLDRVARTLDVNR 844 F +YD++++M C NL GL+++A L V R Sbjct: 203 FFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKR 235
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 6.952e-49 Identity = 116/261 (44.44%), Postives = 157/261 (60.15%), Query Frame = 3 Query: 174 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKF-IWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLERVF*RSSRWF-SVTPFMTSNTLCGSVRTWTVGWTEWLGPWM*TGRSGSAPWPGSETLSTWPALTKFWDGFSPPNEPEKT 950 REVW NL EF LI +++D++ +I+MDTEFPG+V +P +T Y +Y+ LK NVD L LIQVGLT SD +GNLP G+ +KF IW+FNFR+F++ D +A +SIELLR GIDF++N E+G+D VRF ELMMSSG+V N+++SWVTFH YDFGYLVK+LT + LP F +F +V T C + G L M R G GS++L T + K + + P + + T Sbjct: 13 REVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKP---VATFKYNNDL----NYRTLKENVDLLKLIQVGLTFSDENGNLPTCGT---DKFCIWQFNFREFNIGEDIYASESIELLRQCGIDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFKLLYVYFPTVYDIKHLMTFCNGL----FGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRKLKERYFPGSTEKYT 259
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 2.236e-47 Identity = 110/252 (43.65%), Postives = 149/252 (59.13%), Query Frame = 3 Query: 174 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRP-DVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLERVF*RSSRWF-SVTPFMTSNTLCGSVRTWTVGWTEWLGPWM*TGRSGSAPWPGSETLSTWPALTKFWDGF 923 REVW NL+ E +LI V+D +P+++MDTEFPG+V RP S Y HY+ LK+NV+ L +IQ+GLT S+ GNLP G+ + IW+FNFR+FD+ +D A DSIELL+ GID +N +G+DS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT ++LP F + +F +V C S+ G L + R G GS++L T K + F Sbjct: 13 REVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY--------HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGT--DKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYFPTVYDIKHLMKFCNSLH----GGLNKLAELLEVERVGICHQAGSDSLLTSCTFRKLKENF 250
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CNOT8_MOUSE (CCR4-NOT transcription complex subunit 8 OS=Mus musculus GN=Cnot8 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.930e-42 Identity = 81/177 (45.76%), Postives = 118/177 (66.67%), Query Frame = 3 Query: 177 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLP 704 EVWASNLE E I +++ Y +I+MDTEFPG+V RP R D+ Y++L+ NVD L +IQ+GLT ++ G P SG N W+FNF+ F++ D ++ DSI+LL G+ F+++ EEG+D++ FAEL+M+SG+V ++V W++FHS YDFGY+VK+LT LP Sbjct: 14 EVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVV--------VRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYP---SGINT---WQFNFK-FNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLP 175 HSP 2 Score: 37.7354 bits (86), Expect = 9.930e-42 Identity = 17/38 (44.74%), Postives = 26/38 (68.42%), Query Frame = 2 Query: 743 VFGNTIYDVQHIMRLCQNLDSGLDRVARTLDVNRAVRK 856 +F +IYDV+++M+ C+NL GL VA LD+ R R+ Sbjct: 187 LFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQ 224
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CNOT8_HUMAN (CCR4-NOT transcription complex subunit 8 OS=Homo sapiens GN=CNOT8 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.930e-42 Identity = 81/177 (45.76%), Postives = 118/177 (66.67%), Query Frame = 3 Query: 177 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLP 704 EVWASNLE E I +++ Y +I+MDTEFPG+V RP R D+ Y++L+ NVD L +IQ+GLT ++ G P SG N W+FNF+ F++ D ++ DSI+LL G+ F+++ EEG+D++ FAEL+M+SG+V ++V W++FHS YDFGY+VK+LT LP Sbjct: 14 EVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVV--------VRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYP---SGINT---WQFNFK-FNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLP 175 HSP 2 Score: 37.7354 bits (86), Expect = 9.930e-42 Identity = 17/38 (44.74%), Postives = 26/38 (68.42%), Query Frame = 2 Query: 743 VFGNTIYDVQHIMRLCQNLDSGLDRVARTLDVNRAVRK 856 +F +IYDV+++M+ C+NL GL VA LD+ R R+ Sbjct: 187 LFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQ 224
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CNOT7_MOUSE (CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 9.933e-42 Identity = 83/177 (46.89%), Postives = 116/177 (65.54%), Query Frame = 3 Query: 177 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLP 704 EVWA NL+ E + I QVI +Y +++MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ EEG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KILT +LP Sbjct: 14 EVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLP 175 HSP 2 Score: 35.8094 bits (81), Expect = 9.933e-42 Identity = 15/34 (44.12%), Postives = 23/34 (67.65%), Query Frame = 2 Query: 743 VFGNTIYDVQHIMRLCQNLDSGLDRVARTLDVNR 844 +F IYDV+++M+ C+NL GL VA L++ R Sbjct: 187 LFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELER 220
BLAST of DY257165 vs. ExPASy Swiss-Prot
Match: CNOT7_HUMAN (CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3) HSP 1 Score: 157.147 bits (396), Expect = 9.933e-42 Identity = 83/177 (46.89%), Postives = 116/177 (65.54%), Query Frame = 3 Query: 177 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLP 704 EVWA NL+ E + I QVI +Y +++MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ EEG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KILT +LP Sbjct: 14 EVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLP 175 HSP 2 Score: 35.8094 bits (81), Expect = 9.933e-42 Identity = 15/34 (44.12%), Postives = 23/34 (67.65%), Query Frame = 2 Query: 743 VFGNTIYDVQHIMRLCQNLDSGLDRVARTLDVNR 844 +F IYDV+++M+ C+NL GL VA L++ R Sbjct: 187 LFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELER 220 The following BLAST results are available for this feature:
BLAST of DY257165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257165 ID=DY257165; Name=DY257165; organism=Citrus sinensis; type=EST; length=1323bpback to top |