DY257160
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257160 vs. ExPASy Swiss-Prot
Match: SYFB_ARATH (Probable phenylalanyl-tRNA synthetase beta chain OS=Arabidopsis thaliana GN=At1g72550 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 7.154e-22 Identity = 76/203 (37.44%), Postives = 103/203 (50.74%), Query Frame = 2 Query: 251 EEPAKRYDMLCLAGIARPLRVLKKRMAIPKLALTDVLTDSMLQLFAKPETSSTREYVF*AVLIDISFEEGRYNSFIDLQDKLLHNICPETNPCGN*DS*LELVTRPFHV*GFAAITNKFLCHRSRHGTSQPMSLWSFTNQI*N*KNICTYLKNSPLYPVLKEPNRTVLSLS---NN**WGPFLPSP*KLKTGFID*SAPDLTK 850 E PA R D+LCL G+A+ LRV ++ IP L D+ D +LQ+ KPETS R +V AVL ++F+E RYNSFIDLQDKL NIC + L+ + PF F+ + + + L F K ++NSP++PVL + RTVLSL N G + K FI+ +A DLTK Sbjct: 66 EIPANRPDLLCLEGLAQSLRVFIEKQEIPTYTLADISKDKILQMNVKPETSKIRPFVVCAVLRGVTFDEARYNSFIDLQDKLHQNICRRRSLVAIGTHDLDTLQGPFTYEALPPTDINFVPLKQTK-SFRADELIEFYKSDMKLKKFLHIIENSPVFPVLYDSKRTVLSLPPIIN----GAHSAITLQTKNVFIECTATDLTK 263 HSP 2 Score: 74.3294 bits (181), Expect = 1.766e-12 Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 1 Query: 607 FVPPKQTRDFTANELMEFYKPDLKLKKYLHLFEEFSSVPCF---KRTE*DCSVLIQQLIMGAISALTLKTKNGVH*LIRPRFDQTPRLVINPLLTIFPEYCHRKYQM 918 FVP KQT+ F A+EL+EFYK D+KLKK+LH+ E P KRT + + +I GA SA+TL+TKN + ++V+N ++T F E+C RK+++ Sbjct: 184 FVPLKQTKSFRADELIEFYKSDMKLKKFLHIIENSPVFPVLYDSKRTV----LSLPPIINGAHSAITLQTKNVFIECTATDLTKA-KIVLNTMVTTFSEFCARKFEI 285
BLAST of DY257160 vs. ExPASy Swiss-Prot
Match: SYFB_CAEEL (Phenylalanyl-tRNA synthetase beta chain OS=Caenorhabditis elegans GN=frs-2 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 3.110e-17 Identity = 58/170 (34.12%), Postives = 86/170 (50.59%), Query Frame = 2 Query: 257 PAKRYDMLCLAGIARPLRVLKKRMAIPKLALTDVLTDSMLQLFAKPETSSTREYVF*AVLIDISFEEGRYNSFIDLQDKLLHNICPETNPCGN*DS*LELVTRPFHV*GFAAITNKF--LCHRSRHGTSQPMSLWSFTNQI*N*KNICTYLKNSPLYPVLKEPNRTVLSL 760 PA RYD+L + G+AR +R+ K+ + P DV + ++ K ET+ R +V AVL DISF+ Y SFIDLQDKL NIC + L+ + PF A KF L + + M+L+S + + K ++N P+YPV+ + N V S+ Sbjct: 68 PANRYDLLSVEGLARAIRIFKQEIPSPAYKYADVPKTGLQKIIVKKETAQVRPFVVGAVLRDISFDADSYASFIDLQDKLHQNICRKRTLVAIGTHDLDTIQGPFEYRAEAPKDIKFKPLNQTKEYTAEELMTLYSTDSHL---KAYLPIIQNHPVYPVIYDKNGVVCSM 234
BLAST of DY257160 vs. ExPASy Swiss-Prot
Match: SYFB_DROME (Probable phenylalanyl-tRNA synthetase beta chain OS=Drosophila melanogaster GN=CG5706 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.182e-16 Identity = 69/203 (33.99%), Postives = 97/203 (47.78%), Query Frame = 2 Query: 257 PAKRYDMLCLAGIARPLRVLKKRMAIPKLALTDVLTDSMLQLFAKPETSSTREYVF*AVLIDISFEEGRYNSFIDLQDKLLHNICPETNPCGN*DS*LELVTRPFHV*GFAAITNKF--LCHRSRHGTSQPMSLWSFTNQI*N*KNICTYLKNSPLYPVLKEPNRTVLSLS---NN**WGPFLPSP*KLKTGFID*SAPDLTK 850 PA RYD+LCL G+ L V + ++ PK ++ +L++ P T+ R Y AVL +++F + YNSFIDLQDKL NIC + L+ + PF A KF L S+ M +S Q+ K ++ SP+YPV+ + NR VLSL N G K K FI+ +A D TK Sbjct: 69 PANRYDLLCLEGLVTGLLVFQGKLKPPKFQFVELAKRQVLKI--DPSTAQIRPYAVAAVLRNVTFTQASYNSFIDLQDKLHQNICRKRTLVAIGTHDLDTLQGPFSYEALAPDQIKFKPLNQTKEMTGSELMDFYSTHAQL---KQYLPIIRESPVYPVIYDANRVVLSLPPIIN----GDHSKITLKTKNVFIECTATDRTK 262
BLAST of DY257160 vs. ExPASy Swiss-Prot
Match: SYFB_PONAB (Phenylalanyl-tRNA synthetase beta chain OS=Pongo abelii GN=FARSB PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.802e-15 Identity = 59/177 (33.33%), Postives = 90/177 (50.85%), Query Frame = 2 Query: 239 LISYEEPAKRYDMLCLAGIARPLRVLKKRMAIPKLALTDVLTDSMLQ-LFAKPETSSTREYVF*AVLIDISFEEGRYNSFIDLQDKLLHNICPETNPCGN*DS*LELVTRPFHV*GFAAITNKF--LCHRSRHGTSQPMSLWSFTNQI*N*KNICTYLKNSPLYPVLKEPNRTVLSL 760 L + PA RYD+LCL G+ R L+V K+R+ P V+ D +Q L ET+ R + AVL +I F + RY+SFI+LQ+KL NIC + L+ ++ PF KF L + + M+++ N + K+ ++N PLYPV+ + N VLS+ Sbjct: 62 LYKIDVPANRYDLLCLEGLVRGLQVFKERIKAP--VYKRVMPDGKIQKLIITEETAKIRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHL---KHYLHIIENKPLYPVIYDSNGVVLSM 233
BLAST of DY257160 vs. ExPASy Swiss-Prot
Match: SYFB_HUMAN (Phenylalanyl-tRNA synthetase beta chain OS=Homo sapiens GN=FARSB PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 3.802e-15 Identity = 59/177 (33.33%), Postives = 90/177 (50.85%), Query Frame = 2 Query: 239 LISYEEPAKRYDMLCLAGIARPLRVLKKRMAIPKLALTDVLTDSMLQ-LFAKPETSSTREYVF*AVLIDISFEEGRYNSFIDLQDKLLHNICPETNPCGN*DS*LELVTRPFHV*GFAAITNKF--LCHRSRHGTSQPMSLWSFTNQI*N*KNICTYLKNSPLYPVLKEPNRTVLSL 760 L + PA RYD+LCL G+ R L+V K+R+ P V+ D +Q L ET+ R + AVL +I F + RY+SFI+LQ+KL NIC + L+ ++ PF KF L + + M+++ N + K+ ++N PLYPV+ + N VLS+ Sbjct: 62 LYKIDVPANRYDLLCLEGLVRGLQVFKERIKAP--VYKRVMPDGKIQKLIITEETAKIRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHL---KHYLHIIENKPLYPVIYDSNGVVLSM 233
BLAST of DY257160 vs. ExPASy Swiss-Prot
Match: SYFB_DICDI (Phenylalanyl-tRNA synthetase beta chain OS=Dictyostelium discoideum GN=pheSB PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 3.219e-14 Identity = 58/191 (30.37%), Postives = 91/191 (47.64%), Query Frame = 2 Query: 194 EFGVNDFC*AIRRQ*LISYEEPAKRYDMLCLAGIARPLRVLKKRMAIPKLALTDVLTDSMLQLFAKPETSSTREYVF*AVLIDISFEEGRYNSFIDLQDKLLHNICPETNPCGN*DS*LELVTRPFHV*GFAAITNKF--LCHRSRHGTSQPMSLWSFTNQI*N*KNICTYLKNSPLYPVLKEPNRTVLSL 760 E GV D + + + A RYD+LCL GIAR L V + +IPK + +S +L+ E S R + +L DI+F + Y+SFIDLQ+KL NIC + + L+ ++ PF+ A KF L + + + ++ + K +K+SP+YPV+ + V SL Sbjct: 51 ETGVEDL--TVSDDVIYKIDVSANRYDLLCLEGIARALNVYNHKASIPKYQIVPP-KNSHEKLYISKEVESVRPVIVAGILRDITFTQESYDSFIDLQEKLHANICKKRSLVSIGTHDLDTLSGPFYYKALAPKDIKFVPLSQTKEYNAEELFKFYDESSS--HLKKFLPIIKDSPVYPVIYDSKNVVCSL 236
BLAST of DY257160 vs. ExPASy Swiss-Prot
Match: SYFB_MOUSE (Phenylalanyl-tRNA synthetase beta chain OS=Mus musculus GN=Farsb PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 5.490e-14 Identity = 57/176 (32.39%), Postives = 89/176 (50.57%), Query Frame = 2 Query: 239 LISYEEPAKRYDMLCLAGIARPLRVLKKRMAIPKLALTDVLTDSMLQLFAKPETSSTREYVF*AVLIDISFEEGRYNSFIDLQDKLLHNICPETNPCGN*DS*LELVTRPFHV*GFAAITNKF--LCHRSRHGTSQPMSLWSFTNQI*N*KNICTYLKNSPLYPVLKEPNRTVLSL 760 L + PA RYD+LCL G+AR L+V K+R+ P D + +L ET+ R + AVL +I F + RY+SFI+LQ+KL NIC + L+ ++ PF KF L + + M+++ N + K+ +++ PLYPV+ + N VLS+ Sbjct: 62 LYKIDVPANRYDLLCLEGLARGLQVFKERIKAPVYKRVMPKGD-IQKLVITEETAKVRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHL---KHYLHIIESKPLYPVIYDSNGVVLSM 233
BLAST of DY257160 vs. ExPASy Swiss-Prot
Match: SYFB_CANAL (Phenylalanyl-tRNA synthetase beta chain OS=Candida albicans GN=FRS1 PE=2 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 1.597e-13 Identity = 56/175 (32.00%), Postives = 85/175 (48.57%), Query Frame = 2 Query: 242 ISYEEPAKRYDMLCLAGIARPLRVLKKRMAIPKLALTDVLTDSMLQLFAKPETSSTREYVF*AVLIDISFEEGRYNSFIDLQDKLLHNICPETNPCGN*DS*LELVTRPFHV*GFAAITNKFLCHRSRHGTSQ--PMSLWSFTNQI*N*KNICTYLKNSPLYPVLKEPNRTVLSL 760 + E PA RYDMLC+ GIA+ L + P L+ + + L K T R+Y A+L +++ +E Y+SFI LQDKL N+C L+ +T PF + A+ K + + + T + L F + N +K+SP+YPV+ + NRTV SL Sbjct: 52 LKIEVPANRYDMLCIEGIAQALNEFLGNTSAPNYKLSPSKPE--ISLTIKESTYPIRQYAASAILRNVNLDERAYDSFIALQDKLHANLCRNRTLVAIGTHDLDTLTPPF---TYEALAPKDIVFKPLNQTKEINGEELMEFYEKDKNIGKFLHIIKDSPVYPVMLDANRTVASL 221
BLAST of DY257160 vs. ExPASy Swiss-Prot
Match: SYFB_SCHPO (Phenylalanyl-tRNA synthetase beta chain OS=Schizosaccharomyces pombe GN=SPAC23A1.12c PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.307e-12 Identity = 58/171 (33.92%), Postives = 75/171 (43.86%), Query Frame = 2 Query: 257 PAKRYDMLCLAGIARPLRVLKKRMAIPKLALTDVLTDSMLQLFAKPETSSTREYVF*AVLIDISFEEGRYNSFIDLQDKLLHNICPETNPCGN*DS*LELVTRPFHV*GFAAITNKFLCHRSRHGTSQPMSLWSFTNQI*N*KNICTYL---KNSPLYPVLKEPNRTVLSL 760 PA RYDMLCL GIA+ L V +RMA P+ L S L PETS R Y A+L + + RY SFI LQDKL N+C ++ PF F+ + L + + K++ YL NSP YPV+ + R V SL Sbjct: 58 PANRYDMLCLEGIAQALNVFNRRMATPQYK----LLPSTTSLTISPETSEIRPYAAAAILRGVKLDPIRYQSFIALQDKLHANLCRNRTLVAIGTHDFSVMEGPFTYEALKPEEINFVPLNQTQEINGSNLLEFYKDS----KHLSRYLHIIANSPRYPVILDAKRRVCSL 220
BLAST of DY257160 vs. ExPASy Swiss-Prot
Match: SYFB_YEAST (Phenylalanyl-tRNA synthetase beta chain OS=Saccharomyces cerevisiae GN=FRS1 PE=1 SV=3) HSP 1 Score: 45.4394 bits (106), Expect = 3.386e-11 Identity = 33/106 (31.13%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 607 FVPPKQTRDFTANELMEFYK-PDLK--LKKYLHLFEEFSSVPCFKRTE*DCSVLIQQLIMGAISALTLKTKNGVH*LIRPRFDQTP-RLVINPLLTIFPEYCHRKY 912 FVP QT++FT ++L+EFYK P+ K + +Y+H+ E+ P ++ D + LI S +++ T+N + + D+T +V+N L T+F YC + Sbjct: 169 FVPLNQTQEFTGDKLIEFYKSPEQKNNIGRYVHIIEDSPVFPVIMDSK-DRVCSLPPLINSEHSKISVNTRNILIDITAT--DKTKAEIVLNILTTMFSRYCDEPF 271 HSP 2 Score: 44.669 bits (104), Expect = 3.386e-11 Identity = 20/32 (62.50%), Postives = 24/32 (75.00%), Query Frame = 3 Query: 513 RRRTLVAIETHDLNS*QGPFTYEALPPSQINF 608 R R+LVA+ THDL+S +GPF Y ALPP I F Sbjct: 138 RNRSLVAMGTHDLDSIEGPFHYRALPPKDIKF 169 The following BLAST results are available for this feature:
BLAST of DY257160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257160 ID=DY257160; Name=DY257160; organism=Citrus sinensis; type=EST; length=1310bpback to top |