EY728672

Overview
NameEY728672
Unique NameEY728672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728672 vs. ExPASy Swiss-Prot
Match: BDLA_PSEAE (Biofilm dispersion protein bdlA OS=Pseudomonas aeruginosa GN=bdlA PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.029e-13
Identity = 41/77 (53.25%), Postives = 52/77 (67.53%), Query Frame = -3 
Query:  370 EVRQLAGRTSRSTAEIAEMISKILAETRDAVVSMNATQEGAQRGVTLADQAGSVILQIRNGTSDAVEAVSMFASKLD 600
            EVRQLA RTS+ST EIA+MI +I   TR  +  M  +QE A+RGV LA++AG+ IL IR  T   VEAV  F+  L+
Sbjct:  338 EVRQLAERTSKSTKEIADMIGRIQTGTRSVIDDMQHSQEQARRGVELANEAGAAILGIRESTHKVVEAVQQFSRTLN 414
The following BLAST results are available for this feature:
BLAST of EY728672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BDLA_PSEAE3.029e-1353.25Biofilm dispersion protein bdlA OS=Pseudomonas aer... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-A07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728672 ID=EY728672; Name=EY728672; organism=Citrus sinensis; type=EST; length=602bp
TCGATTCGCGACCAGAACACCCAGATCGCCACGGCCGCCGAGGAACAGCA
CCAGGTGGCTGAAGAGATCAACCGGCACATCGCGCAGATCCATGCCGACG
CGCAGTTGGTGGAAGGCTTTGCGCATTCGGCACAGACCGGGTCCGGGCGG
TTGACGGATATTTCCGGTCAGCTCAAGGGCCTGGTGGGGCGCTTCAAGTT
CTAGGCATTTCGCTGAGGGCAATGTCTGAACTGCCCACAGCGCCGGCAAA
AAAAAGCGCTACTCAATGAGTGGCGCTTTTTCTATTCCCTGTTCGACGTC
AAGACCCAGGCGCAGCTTGAGGCTCTATCCCACCCAACTGATGGCGGTCT
TTGGAATCACTTCGGACTCATCGAGCTTGGAAGCAAACATGCTTACCGCC
TCGACCGCGTCGCTGGTGCCATTGCGAATCTGCAAAATCACCGAACCGGC
TTGATCGGCCAACGTAACGCCGCGCTGCGCCCCTTCCTGAGTGGCGTTCA
TGCTGACGACCGCGTCCCGTGTCTCGGCGAGAATCTTGCTGATCATCTCG
GCGATTTCCGCCGTTGAGCGGCTGGTGCGACCCGCCAATTGCCTCACCTC
GT
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