FC871188

Overview
NameFC871188
Unique NameFC871188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length417
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13308 contig Csv1_Contig13308:378..794. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC871188 vs. ExPASy Swiss-Prot
Match: AGM1_ARATH (Phosphoacetylglucosamine mutase OS=Arabidopsis thaliana GN=DRT101 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.727e-12
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 1 
Query:    1 RSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELVDRFLG 123
            R+FIRPSGTEDVVRVYAEASTQE AD LANSVA+LV  FLG
Sbjct:  514 RAFIRPSGTEDVVRVYAEASTQEDADSLANSVAQLVKSFLG 554
The following BLAST results are available for this feature:
BLAST of FC871188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AGM1_ARATH6.727e-1285.37Phosphoacetylglucosamine mutase OS=Arabidopsis tha... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAK2AE11FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2AE11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871188 ID=FC871188; Name=FC871188; organism=Citrus sinensis; type=EST; length=417bp
CGATCTTTCATACGTCCGTCGGGCACTGAGGATGTCGTACGTGTATATGC
AGAGGCATCCACACAAGAAGCAGCAGACAAGCTTGCCAACTCTGTAGCCG
AACTTGTAGATCGGTTCCTAGGCTTCAGAAGCTCCTAGTGTCTGGTCTTC
TTTCACTGACTAAACATGGCTAATTTGAATTGCAGATTTCATATCTTTGA
TCGATCATTGTGAATGATATTAATGATTTAGTCCTGTAATTTTTGCTTCT
TTTTTTTTCTAAATTTGATTTGAGGATCCATTAGCAGTGCAAATGCATGA
ATGGAAGATAGTTTTCAATGGAACAGATAGGTGCAAATGTTAAAAGAAAA
AAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAT
GAAAAAAAAAAAAAAAA
back to top