DR911458

Overview
NameDR911458
Unique NameDR911458
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length291
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR911458 vs. ExPASy Swiss-Prot
Match: GAI1_VITVI (DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.624e-11
Identity = 34/61 (55.74%), Postives = 48/61 (78.69%), Query Frame = -2 
Query:    3 QPVAEIDGLLAGAGYKVRSSELRQVAQRLERLETVMVNSPAD-ISQLASDTVHYNPSDLAS 182
            Q  A +D LLA  GY V++S++ +VAQ+LE+LE V+VN+  D +S LAS+TVHYNPSDL++
Sbjct:   29 QQDAGMDELLAVLGYNVKASDMAEVAQKLEQLEEVIVNAQEDGLSHLASETVHYNPSDLSN 89
The following BLAST results are available for this feature:
BLAST of DR911458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GAI1_VITVI7.624e-1155.74DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_19586 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-31_C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR911458 ID=DR911458; Name=DR911458; organism=Citrus sinensis; type=EST; length=291bp
CAAGAGGCGAGATCAGAGGGATTGTAATGGACGGTATCGGAAGCGAGTTG
GGAGATATCGGCAGGAGAGTTGACCATGACCGTTTCGAGGCGTTCAAGTC
GTTGAGCTACTTGACGGAGCTCCGAAGACCGTACTTTGTACCCGGCTCCT
GCAAGTAACCCATCTATCTCAGCAACAGGTTGTTTCGTACCGGAACACGA
CGATGAGCTTCCGCTGTTGCTTCCGCCTGACGTGGCAGAGTCGTACAGTA
CCATCCTTTCTCTTCTCCTTTTCGTTCTCGAAAAAAAAAAA
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