FC871148

Overview
NameFC871148
Unique NameFC871148
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13482 contig Csv1_Contig13482:1..738. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871148 vs. ExPASy Swiss-Prot
Match: UPL1_ARATH (E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana GN=UPL1 PE=1 SV=3)

HSP 1 Score: 459.914 bits (1182), Expect = 6.355e-129
Identity = 222/244 (90.98%), Postives = 233/244 (95.49%), Query Frame = 3
Query:    3 LNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTNAIRPQITSFLEGFGELVPRELISIFNDKELELLISGLPEIDLDDLXAHTEYTGYTAASTVVQWFWEV 734
            LNV FQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGN+A+FQPNPNSVYQTEHLSYFKFVGR+VAKALFDGQLLDV+FTRSFYKH+LGVKVTYHDIEAVDPDYYKNLKW+LENDVSDI DLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVA HILTNAIRPQI +FLEGF EL+PREL+SIFNDKELELLISGLPEID DDL A+TEYT YTA S V+ WFWEV
Sbjct: 3348 LNVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNDATFQPNPNSVYQTEHLSYFKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWLLENDVSDILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVAGHILTNAIRPQINAFLEGFNELIPRELVSIFNDKELELLISGLPEIDFDDLKANTEYTSYTAGSPVIHWFWEV 3591          
BLAST of FC871148 vs. ExPASy Swiss-Prot
Match: UPL2_ARATH (E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana GN=UPL2 PE=1 SV=2)

HSP 1 Score: 457.218 bits (1175), Expect = 4.119e-128
Identity = 220/244 (90.16%), Postives = 233/244 (95.49%), Query Frame = 3
Query:    3 LNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTNAIRPQITSFLEGFGELVPRELISIFNDKELELLISGLPEIDLDDLXAHTEYTGYTAASTVVQWFWEV 734
            LNV FQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGN+A+FQPNPNSVYQTEHLSYFKFVGR+VAKALFDGQLLDV+FTRSFYKH+LGVKVTYHDIEAVDPDYYKNLKW+LENDVSDI DLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILT+AIRPQI +FLEG  EL+PREL+SIFNDKELELLISGLPEID DDL A+TEYT YT  S V++WFWEV
Sbjct: 3325 LNVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNDATFQPNPNSVYQTEHLSYFKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWLLENDVSDILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTSAIRPQINAFLEGLNELIPRELVSIFNDKELELLISGLPEIDFDDLKANTEYTSYTVGSPVIRWFWEV 3568          
BLAST of FC871148 vs. ExPASy Swiss-Prot
Match: TOM1_NEUCR (E3 ubiquitin-protein ligase TOM1-like OS=Neurospora crassa GN=B11B22.010 PE=3 SV=3)

HSP 1 Score: 265.388 bits (677), Expect = 2.297e-70
Identity = 127/243 (52.26%), Postives = 179/243 (73.66%), Query Frame = 3
Query:    3 LNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNN-ASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTNAIRPQITSFLEGFGELVPRELISIFNDKELELLISGLPEIDLDDLXAHTEYTGYTAASTVVQWFW 728
            LN+ FQGEEG+DAGG+TREW+Q+LSR +FD   +LF  V ++  +F PN  S    EHL +FKF+GR++ KAL++G+LL+ +F+R+ YK +LG  V+  D+E+ DPDYYK+L WMLEND++DI   TFS++ D     ++ + +V D  L   GRNI VTEE KHEYV L+ +H L  +++ Q+ +FL GF E++P ELI+IFN++ELELLISGLP+ID+DD  A+TEY  Y+A +  +QWFW
Sbjct: 3699 LNIRFQGEEGVDAGGVTREWFQVLSRQMFDPNYVLFVPVSSDRTTFHPNKLSPINDEHLPFFKFIGRIIGKALYEGRLLECYFSRAVYKRILGKPVSVKDMESFDPDYYKSLVWMLENDITDIITETFSVEDD-----VFGEVKVVD--LIENGRNIPVTEENKHEYVRLIVEHKLITSVKDQMKAFLTGFHEIIPEELIAIFNEQELELLISGLPDIDIDDWKANTEYHNYSAGAPQIQWFW 3934          
BLAST of FC871148 vs. ExPASy Swiss-Prot
Match: PTR1_SCHPO (E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharomyces pombe GN=ptr1 PE=1 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 6.256e-68
Identity = 127/243 (52.26%), Postives = 172/243 (70.78%), Query Frame = 3
Query:    3 LNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTV-GNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTNAIRPQITSFLEGFGELVPRELISIFNDKELELLISGLPEIDLDDLXAHTEYTGYTAASTVVQWFW 728
            LN+HF+ EEG+DAGG+TREW Q+L+R +F+    LF  V G+  +F PN +S    +HLS+FKF GR++ KAL+DG+LLD HF+R+ YKHML   V+  DIE++DPDYYK+L WML ND++DI    F++    EK +  EKT V   +L P GRNI VTE  K  YV+ + D+ L  +++ Q+ S L+GF +++P  LI IFN++ELELLISGLPEID+DD   +TEY GY  +S  VQWFW
Sbjct: 2900 LNIHFRDEEGVDAGGVTREWLQVLARQMFNPDYALFLPVTGDATTFHPNRDSSVNPDHLSFFKFTGRIIGKALYDGRLLDCHFSRAVYKHMLHRSVSVKDIESLDPDYYKSLVWMLNNDITDIITEEFAV----EKDVFGEKTVV---DLIPNGRNIPVTELNKQNYVNRMVDYKLRESVKDQLKSLLDGFSDIIPSHLIQIFNEQELELLISGLPEIDIDDWKNNTEYHGYNVSSPQVQWFW 3135          
BLAST of FC871148 vs. ExPASy Swiss-Prot
Match: HUWE1_MOUSE (E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus GN=Huwe1 PE=1 SV=4)

HSP 1 Score: 247.284 bits (630), Expect = 6.474e-65
Identity = 131/244 (53.69%), Postives = 171/244 (70.08%), Query Frame = 3
Query:    3 LNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLF-TTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIP-DLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTNAIRPQITSFLEGFGELVPRELISIFNDKELELLISGLPEIDLDDLXAHTEYTGYTAASTVVQWFW 728
            L + F+GEEG DAGGL REWY ++SR +F+    LF T+ G+  ++  NP+S     HLSYFKFVGR+VAKA++D +LL+ +FTRSFYKH+LG  V Y D+E+ D  +Y+ L ++LENDVS +  DLTFS +  E     +   EV D  LKP G NI VTEE K EYV LV    +T AIR Q+ +FLEGF E++P+ LISIF ++ELELLISGLP ID+DDL ++TEY  Y + S  +QWFW
Sbjct: 4049 LYIVFEGEEGQDAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHCNPNHLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLENDVSTLGYDLTFSTEVQE-----FGVCEVRD--LKPNGANILVTEENKKEYVHLVCQMRMTGAIRKQLAAFLEGFYEIIPKRLISIFTEQELELLISGLPTIDIDDLKSNTEYHKYQSNSIQIQWFW 4285          
BLAST of FC871148 vs. ExPASy Swiss-Prot
Match: HUWE1_HUMAN (E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens GN=HUWE1 PE=1 SV=3)

HSP 1 Score: 247.284 bits (630), Expect = 6.474e-65
Identity = 131/244 (53.69%), Postives = 171/244 (70.08%), Query Frame = 3
Query:    3 LNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLF-TTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIP-DLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTNAIRPQITSFLEGFGELVPRELISIFNDKELELLISGLPEIDLDDLXAHTEYTGYTAASTVVQWFW 728
            L + F+GEEG DAGGL REWY ++SR +F+    LF T+ G+  ++  NP+S     HLSYFKFVGR+VAKA++D +LL+ +FTRSFYKH+LG  V Y D+E+ D  +Y+ L ++LENDVS +  DLTFS +  E     +   EV D  LKP G NI VTEE K EYV LV    +T AIR Q+ +FLEGF E++P+ LISIF ++ELELLISGLP ID+DDL ++TEY  Y + S  +QWFW
Sbjct: 4046 LYIVFEGEEGQDAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHCNPNHLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLENDVSTLGYDLTFSTEVQE-----FGVCEVRD--LKPNGANILVTEENKKEYVHLVCQMRMTGAIRKQLAAFLEGFYEIIPKRLISIFTEQELELLISGLPTIDIDDLKSNTEYHKYQSNSIQIQWFW 4282          
BLAST of FC871148 vs. ExPASy Swiss-Prot
Match: HUWE1_RAT (E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Rattus norvegicus GN=Huwe1 PE=1 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 4.640e-63
Identity = 128/237 (54.01%), Postives = 166/237 (70.04%), Query Frame = 3
Query:   24 EEGIDAGGLTREWYQLLSRVIFDKGALLF-TTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIP-DLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTNAIRPQITSFLEGFGELVPRELISIFNDKELELLISGLPEIDLDDLXAHTEYTGYTAASTVVQWFW 728
            EEG DAGGL REWY ++SR +F+    LF T+ G+  ++  NP+S     HLSYFKFVGR+VAKA++D +LL+ +FTRSFYKH+LG  V Y D+E+ D  +Y+ L ++LENDVS +  DLTFS +  E     +   EV D  LKP G NI VTEE K EYV LV    +T AIR Q+ +FLEGF E++P+ LISIF ++ELELLISGLP ID+DDL ++TEY  Y + S  +QWFW
Sbjct:    1 EEGQDAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHCNPNHLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLENDVSTLGYDLTFSTEVQE-----FGVCEVRD--LKPNGANILVTEENKKEYVHLVCQMRMTGAIRKQLAAFLEGFYEIIPKRLISIFTEQELELLISGLPTIDIDDLKSNTEYHKYQSNSIQIQWFW 230          
BLAST of FC871148 vs. ExPASy Swiss-Prot
Match: HACE1_XENTR (E3 ubiquitin-protein ligase HACE1 OS=Xenopus tropicalis GN=hace1 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.546e-61
Identity = 117/244 (47.95%), Postives = 167/244 (68.44%), Query Frame = 3
Query:    9 VHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIP-DLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTNAIRPQITSFLEGFGELVPRELISIFNDKELELLISGLPEIDLDDLXAHTEYT-GYTAASTVVQWFWEV 734
            V F GEEG+  G + REW+ +LS  I +    LFT   +  +FQPN NS    +HL+YF+F G ++  AL+  QL++++FTRSFYKH+LG+ V Y D+ ++DP+Y KNL+W+L+ND+SD+  +LTFS++ D     ++   E  +  LKPGG +I VT+E K EYV LV +  +T AI+PQI  FL+GF   +P  LI +F++ ELELL+SG+PEID++D   +TEYT GY     V+QWFWEV
Sbjct:  587 VRFHGEEGMGQG-VVREWFDILSSEIINPDYALFTQSADGTTFQPNSNSSVNPDHLNYFRFAGEILGLALYHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDNDISDLGLELTFSVETD-----VFGAME--EVPLKPGGASILVTQENKAEYVQLVTELRMTRAIQPQINGFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWMKNTEYTSGYERDDQVIQWFWEV 822          
BLAST of FC871148 vs. ExPASy Swiss-Prot
Match: HACE1_XENLA (E3 ubiquitin-protein ligase HACE1 OS=Xenopus laevis GN=hace1 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.672e-61
Identity = 116/244 (47.54%), Postives = 167/244 (68.44%), Query Frame = 3
Query:    9 VHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIP-DLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTNAIRPQITSFLEGFGELVPRELISIFNDKELELLISGLPEIDLDDLXAHTEYT-GYTAASTVVQWFWEV 734
            V F GEEG+  G + REW+ +LS  + +    LFT   +  +FQPN NS    +HL+YF+F G ++  AL+  QL++++FTRSFYKH+LG+ V Y D+ ++DP+Y KNL+W+L+ND+SD+  +LTFS++ D     ++   E  +  LKPGG +I VT+E K EYV LV +  +T AI+PQI  FL+GF   +P  LI +F++ ELELL+SG+PEID++D   +TEYT GY     V+QWFWEV
Sbjct:  619 VRFHGEEGMGQG-VVREWFDILSSEMINPDYALFTQSADGTTFQPNSNSSVNPDHLNYFRFAGEILGLALYHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDNDISDLGLELTFSVETD-----VFGAME--EVPLKPGGASILVTQENKAEYVQLVTELRMTRAIQPQINGFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWMKNTEYTSGYERDDQVIQWFWEV 854          
BLAST of FC871148 vs. ExPASy Swiss-Prot
Match: HACE1_MOUSE (E3 ubiquitin-protein ligase HACE1 OS=Mus musculus GN=Hace1 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.155e-60
Identity = 116/244 (47.54%), Postives = 167/244 (68.44%), Query Frame = 3
Query:    9 VHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIP-DLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTNAIRPQITSFLEGFGELVPRELISIFNDKELELLISGLPEIDLDDLXAHTEYT-GYTAASTVVQWFWEV 734
            V F GEEG+  G + REW+ +LS  I +    LFT   +  +FQPN NS    +HL+YF+F G+++  AL   QL++++FTRSFYKH+LG+ V Y D+ ++DP+Y KNL+W+L+ND+SD+  +LTFS++ D     ++   E  +  LKPGG +I VT+  K EYV LV +  +T AI+PQI +FL+GF   +P  LI +F++ ELELL+SG+PEID++D   +TEYT GY     V+QWFWEV
Sbjct:  584 VRFHGEEGMGQG-VVREWFDILSNEIVNPDYALFTQSADGTTFQPNSNSYVNPDHLNYFRFAGQILGLALNHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDNDISDLGLELTFSVETD-----VFGAME--EVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWIKNTEYTSGYEREDPVIQWFWEV 819          
The following BLAST results are available for this feature:
BLAST of FC871148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
UPL1_ARATH6.355e-12990.98E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis th... [more]
UPL2_ARATH4.119e-12890.16E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis th... [more]
TOM1_NEUCR2.297e-7052.26E3 ubiquitin-protein ligase TOM1-like OS=Neurospor... [more]
PTR1_SCHPO6.256e-6852.26E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharo... [more]
HUWE1_MOUSE6.474e-6553.69E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus ... [more]
HUWE1_HUMAN6.474e-6553.69E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens ... [more]
HUWE1_RAT4.640e-6354.01E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Ra... [more]
HACE1_XENTR2.546e-6147.95E3 ubiquitin-protein ligase HACE1 OS=Xenopus tropi... [more]
HACE1_XENLA5.672e-6147.54E3 ubiquitin-protein ligase HACE1 OS=Xenopus laevi... [more]
HACE1_MOUSE2.155e-6047.54E3 ubiquitin-protein ligase HACE1 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2AC09FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2AC09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871148 ID=FC871148; Name=FC871148; organism=Citrus sinensis; type=EST; length=738bp
GATTGAATGTGCATTTTCAAGGTGAAGAGGGTATTGATGCTGGAGGTCTG
ACGAGAGAATGGTATCAATTACTGTCCAGGGTTATATTCGACAAAGGGGC
GTTGCTTTTCACCACTGTGGGCAACAATGCATCTTTCCAGCCAAACCCCA
ATTCTGTCTACCAAACGGAGCATCTCTCGTACTTCAAATTTGTGGGCCGT
GTGGTTGCCAAGGCTCTATTTGATGGTCAGCTTTTGGATGTTCATTTTAC
TAGGTCCTTCTATAAGCACATGCTAGGTGTAAAGGTGACTTATCATGACA
TAGAGGCTGTTGACCCTGATTATTACAAGAATTTGAAGTGGATGCTGGAG
AATGATGTGAGTGACATACCTGACCTGACATTCAGCATGGATGCTGACGA
GGAAAAGCACATTCTGTATGAGAAAACTGAGGTTACTGATTATGAGCTTA
AACCTGGAGGAAGAAACATAAGGGTTACGGAAGAAACAAAACATGAGTAT
GTAGACCTTGTGGCTGATCATATCTTGACAAATGCCATTCGTCCTCAAAT
CACCTCGTTCTTGGAAGGTTTTGGTGAATTGGTTCCGCGGGAACTTATTT
CAATATTTAATGACAAAGAGCTAGAGCTCCTAATCAGTGGGCTTCCTGAG
ATTGATTTGGATGACTTANGGGCCCATACCGAATACACTGGCTATACAGC
AGCATCTACTGTTGTCCAGTGGTTTTGGGAGGTTGCTA
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