EY758165

Overview
NameEY758165
Unique NameEY758165
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY758165 vs. ExPASy Swiss-Prot
Match: Y1360_ARATH (Thylakoid lumenal protein At1g03610, chloroplastic OS=Arabidopsis thaliana GN=At1g03600 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.557e-49
Identity = 98/142 (69.01%), Postives = 120/142 (84.51%), Query Frame = 1 
Query:  151 PPQKQTLLRRQFLTLSAATTLGAPLI--VSTPAAFASSDEEYVKDTEDVINKVRTTITMDKENPNVATAVAELRDVSNTWVAKYRREKALLGRASFRDIYSALNAVSGHYISFGPTAPIPAKRKARILEEMDSAEKALSRGR 570
            PP++  LLRR FL+L+A +TL    I  ++     A+ DEEY+KDT  VI+KVR+T++M K +PNVA AVAELR+ SN+WVAKYR+EKALLG+ASFRDIYSALNAVSGHY+SFGPTAPIPAKRKARILEEM++AEKAL+RGR
Sbjct:   33 PPRRNHLLRRDFLSLAATSTLLTQSIQFLAPAPVSAAEDEEYIKDTSAVISKVRSTLSMQKTDPNVADAVAELREASNSWVAKYRKEKALLGKASFRDIYSALNAVSGHYVSFGPTAPIPAKRKARILEEMETAEKALTRGR 174
The following BLAST results are available for this feature:
BLAST of EY758165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1360_ARATH9.557e-4969.01Thylakoid lumenal protein At1g03610, chloroplastic... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-040-H08-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY758165 ID=EY758165; Name=EY758165; organism=Citrus sinensis; type=EST; length=789bp
GCGCTCGGTGCCGGNATTAAAAGCTNCGACCCACGCGTCCGAATTATGTT
TCTGTCCTCACCAACACTCTAAACACCCACCTCTAAGCCCGCCGCCCTCC
TCGCCGTCAAAACCAAAACCGTCACTGCCTCCGTCGCCGCCGCAGAACTA
CCACCACAAAAGCAAACCCTACTCAGGCGCCAGTTCCTGACCCTTTCAGC
TGCCACCACACTCGGTGCTCCTCTGATTGTGTCAACACCAGCAGCATTTG
CTTCTTCTGATGAGGAGTACGTGAAGGACACTGAAGATGTGATCAACAAA
GTGAGAACGACCATCACAATGGACAAGGAGAATCCGAATGTGGCCACCGC
TGTAGCTGAGCTAAGAGACGTGTCAAATACTTGGGTGGCCAAGTACAGAA
GAGAGAAAGCTTTGCTGGGCAGAGCTTCGTTTAGAGATATTTACTCAGCT
TTGAATGCTGTTTCTGGTCACTACATTAGTTTTGGACCCACTGCTCCCAT
TCCTGCTAAGAGAAAGGCTAGGATTCTTGAAGAAATGGACTCTGCTGAGA
AGGCTCTTTCGAGAGGTAGATAATTCGAAGACATCACTAGCTAAGTGCTA
AGACAATATCATTGAGCTACTTGAAGTCGAAGGGAACCCCCTTTCTGTTA
TTTTTCTCTTTTAAATTTAACACCCCACCCCCACCACCAAAAAAAAAACC
AATTTTATCAAACTGTTTTGTAAATTTGAGGTTCATTTGTGAATGAATGA
TGAGAAATTTGCAATTTAAAAAAAAAAAAAAAAAAAAAA
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