EY758138

Overview
NameEY758138
Unique NameEY758138
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS191_ARATH (40S ribosomal protein S19-1 OS=Arabidopsis thaliana GN=RPS19A PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.701e-56
Identity = 105/131 (80.15%), Postives = 111/131 (84.73%), Query Frame = 1
Query:    4 MDTAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            M T K VKDVSPH+FVKAYA+HLKRSGKIELPTW DIVKTG LKELAPYDPDWYYIRAASMARK+YLRGGLGVG+FRRIYGG KRNG RPPHF KSSG +ARHIL  L   NI+ LD KGG RIT  G RD
Sbjct:    1 MATGKTVKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITSSGQRD 131          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS193_ARATH (40S ribosomal protein S19-3 OS=Arabidopsis thaliana GN=RPS19C PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.466e-56
Identity = 106/131 (80.92%), Postives = 110/131 (83.97%), Query Frame = 1
Query:    4 MDTAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            M T K VKDVSPHEFVKAYAAHLKRSGKIELP W DIVKTG LKELAPYDPDWYYIRAASMARK+YLRGGLGVG+FRRIYGG KRNG RPPHF KSSG VARHIL  L   NI+ LD KGG +IT  G RD
Sbjct:    1 MATGKTVKDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSSGQRD 131          

HSP 2 Score: 21.9422 bits (45), Expect = 5.466e-56
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 2
Query:  380 SAGRGILDQFAGRIAS 427
            S+G+  LDQ AGRIA+
Sbjct:  126 SSGQRDLDQVAGRIAA 141          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS192_ARATH (40S ribosomal protein S19-2 OS=Arabidopsis thaliana GN=RPS19B PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.499e-55
Identity = 104/131 (79.39%), Postives = 110/131 (83.97%), Query Frame = 1
Query:    4 MDTAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            M T K VKDVSPH+FVKAYA+HLKRSGKIELP W DIVKTG LKELAPYDPDWYYIRAASMARKIYLRGGLGVG+FRRIYGG KRNG RPPHF KSSG +ARHIL  L   +I+ LD KGG RIT  G RD
Sbjct:    1 MATGKTVKDVSPHDFVKAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAASMARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKGGRRITSSGQRD 131          

HSP 2 Score: 21.9422 bits (45), Expect = 3.499e-55
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 2
Query:  380 SAGRGILDQFAGRIAS 427
            S+G+  LDQ AGRIA+
Sbjct:  126 SSGQRDLDQVAGRIAA 141          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19_ORYSJ (40S ribosomal protein S19 OS=Oryza sativa subsp. japonica GN=RPS19A PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.323e-46
Identity = 88/129 (68.22%), Postives = 104/129 (80.62%), Query Frame = 1
Query:   10 TAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            TA+ VKDV+PHEFVKAY+AHLKRSGK+ELP W DIVKT   KEL PYDPDWYY RAAS+ARKIYLR G+GVG F++IYGG +RNG RPPHF KSSG+++R+IL  L    I+ +D KGG  IT +G RD
Sbjct:    5 TARTVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRD 133          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19_MYAAR (40S ribosomal protein S19 OS=Mya arenaria GN=RPS19 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.055e-36
Identity = 68/126 (53.97%), Postives = 92/126 (73.02%), Query Frame = 1
Query:   19 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            +VKDVS HEF +A+AA LK+SGK+++P W D VKTG  KEL+PY+PDWY+IRAAS+ R +Y+R   G+GSF +IYGG +R G  P HF K++GS++R +L  L    I+  D  GG R+T +G RD
Sbjct:    4 SVKDVSSHEFTRAFAAFLKKSGKMKVPEWTDFVKTGMFKELSPYEPDWYFIRAASICRHLYIRSPAGIGSFEKIYGGRRRRGTAPSHFCKANGSISRRLLQSLEGLKIVEKDPNGGRRLTSQGRRD 129          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19_BRABE (40S ribosomal protein S19 OS=Branchiostoma belcheri GN=RPS19 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.455e-34
Identity = 69/125 (55.20%), Postives = 89/125 (71.20%), Query Frame = 1
Query:   22 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            VKDV+  EFVKA+AA LK+SGK++LP W D+VKT   KELAPYDPDW+Y+RAAS AR +Y+RGG+GVG+  +IYGG KR G +P  F   S  V+R +L  L    ++  D  GG R+T +G RD
Sbjct:    7 VKDVNQQEFVKAFAAFLKKSGKLKLPEWVDLVKTAPHKELAPYDPDWFYLRAASTARHLYMRGGVGVGAMCKIYGGRKRRGTKPAKFRVCSRGVSRTVLQSLEGIKMVEKDAAGGRRLTSQGQRD 131          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19_RAT (40S ribosomal protein S19 OS=Rattus norvegicus GN=Rps19 PE=2 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 1.442e-33
Identity = 70/125 (56.00%), Postives = 89/125 (71.20%), Query Frame = 1
Query:   22 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            VKDV+  EFV+A AA LK+SGK+++P W D VK    KELAPYD +W+Y RAAS AR +YLRGG GVGS  +IYGG +RNG+RP HFS+ S SVAR +L  L    ++  D  GG ++T +G RD
Sbjct:    6 VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19_MOUSE (40S ribosomal protein S19 OS=Mus musculus GN=Rps19 PE=1 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 1.442e-33
Identity = 70/125 (56.00%), Postives = 89/125 (71.20%), Query Frame = 1
Query:   22 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            VKDV+  EFV+A AA LK+SGK+++P W D VK    KELAPYD +W+Y RAAS AR +YLRGG GVGS  +IYGG +RNG+RP HFS+ S SVAR +L  L    ++  D  GG ++T +G RD
Sbjct:    6 VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19_MYXGL (40S ribosomal protein S19 OS=Myxine glutinosa GN=rps19 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.481e-33
Identity = 69/125 (55.20%), Postives = 88/125 (70.40%), Query Frame = 1
Query:   22 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            VKDV+  EFVKA AA  K+SGK++ P W D VK G  KELAP+D DWYYIR AS+AR +Y+RGG+GVG+  +IYGG +RNG RP H+S+ S +VAR +L  L    ++  D  GG R+T  G RD
Sbjct:    6 VKDVNQQEFVKALAAFFKKSGKLKKPDWVDTVKLGKHKELAPFDIDWYYIRTASVARHLYMRGGVGVGAMTKIYGGRQRNGTRPSHYSRGSRNVARKVLQSLEMLKMVEKDPNGGRRLTSIGQRD 130          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19_PONAB (40S ribosomal protein S19 OS=Pongo abelii GN=RPS19 PE=2 SV=3)

HSP 1 Score: 141.354 bits (355), Expect = 7.158e-33
Identity = 69/125 (55.20%), Postives = 88/125 (70.40%), Query Frame = 1
Query:   22 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            VKDV+  EFV+A AA LK+SGK+++P W D VK    KELAPYD +W+Y RAAS AR +YLRGG GVGS  +IYGG +RNG+ P HFS+ S SVAR +L  L    ++  D  GG ++T +G RD
Sbjct:    6 VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130          
The following BLAST results are available for this feature:
BLAST of EY758138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
RS191_ARATH2.701e-5680.1540S ribosomal protein S19-1 OS=Arabidopsis thalian... [more]
RS193_ARATH5.466e-5680.9240S ribosomal protein S19-3 OS=Arabidopsis thalian... [more]
RS192_ARATH3.499e-5579.3940S ribosomal protein S19-2 OS=Arabidopsis thalian... [more]
RS19_ORYSJ4.323e-4668.2240S ribosomal protein S19 OS=Oryza sativa subsp. j... [more]
RS19_MYAAR4.055e-3653.9740S ribosomal protein S19 OS=Mya arenaria GN=RPS19... [more]
RS19_BRABE8.455e-3455.2040S ribosomal protein S19 OS=Branchiostoma belcher... [more]
RS19_RAT1.442e-3356.0040S ribosomal protein S19 OS=Rattus norvegicus GN=... [more]
RS19_MOUSE1.442e-3356.0040S ribosomal protein S19 OS=Mus musculus GN=Rps19... [more]
RS19_MYXGL5.481e-3355.2040S ribosomal protein S19 OS=Myxine glutinosa GN=r... [more]
RS19_PONAB7.158e-3355.2040S ribosomal protein S19 OS=Pongo abelii GN=RPS19... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-040-F02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY758138 ID=EY758138; Name=EY758138; organism=Citrus sinensis; type=EST; length=917bp
GAGATGGATACTGCAAAAAACGTGAAGGACGTGTCTCCCCACGAGTTCGT
CAAGGCCTACGCCGCCCATCTCAAGCGCTCCGGCAAGATTGAGCTTCCTA
CTTGGAACGACATCGTCAAGACTGGAACGTTGAAGGAGCTAGCCCCTTAT
GACCCCGATTGGTACTATATCAGGGCTGCTTCAATGGCGAGGAAGATCTA
CTTGAGGGGTGGTCTTGGTGTTGGTTCCTTCCGTAGAATCTATGGAGGGG
GGAAGAGGAACGGTATCCGCCCACCTCATTTCAGCAAGAGCAGCGGCTCT
GTTGCTCGTCACATACTTCACCATTTGGGGGACACGAACATCATGGTGCT
TGACTGCAAGGGTGGAATGAGAATCACATTCCGCGGGCCGCGGGATCCTT
GATCAATTTGCTGGGCGGATTGCCTCTGTTGCCCCTTGGGGGGTTATCTC
AATCCTTCAAAGGCGGGCTGGTTTTTAGTTGGGTGGCTGGATGGGGGTTT
GTTGTATAGACCCTGCGGCTGCGGCTCTAACTGTGTGTCTCGAACCTCGG
TGTATTGGTTTCCGTCATCTTTACTATCACTTACACTAATAATAATTAAA
GGTATGCGGTGTTGAGAGTCGTTCTTTGGATATCTTTGTTGGTTATTTTA
CCTTCTTTTTTTGTTCCCATAACTTTTAATTGGTCTTTCGTTATAAGCTG
GGAATGGTTAAAACACTCTCTTTCTCCCTGCGGGCGAGTAGGCGGGTCTG
TTTCGCGATGGGGGGTGCGTGTCTTTTCTCTCTCCTTTTTCTTTACACAA
TCTTTTCGTTGTTGCGCACTGGATCCTTTATTTCAGACGTGTTTGCTGCG
GGGAGGTAGATAAGCACATGAGTCTTTGTATTGTTATGGGTGTGAGATCG
ACGGTAATGTATAATAA
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