EY679066

Overview
NameEY679066
Unique NameEY679066
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679066 vs. ExPASy Swiss-Prot
Match: Y4115_ARATH (Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis thaliana GN=At4g01150 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.431e-21
Identity = 49/68 (72.06%), Postives = 53/68 (77.94%), Query Frame = 3 
Query:  279 SDLKEKWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSVXXXXXXXXXXXXXYTGWFVYRYLLFKSS 482
            +DLKEKWD +ENKSTVL+YGGGAIVAVWLSS +VGAINSV             YTGWFVYRYLLFKSS
Sbjct:   78 TDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSS 145
The following BLAST results are available for this feature:
BLAST of EY679066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4115_ARATH4.431e-2172.06Uncharacterized protein At4g01150, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-054-G09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679066 ID=EY679066; Name=EY679066; organism=Citrus sinensis; type=EST; length=874bp
CCCACGCGTCCGAGAAAACGAAAGAACACACAAATCAAAAGTATCAATGG
CAGCGACGGCGTACGCGGCGGTGTTAACTCCACGTGTCCCCTCAACCACC
ACCGTCAAAGTCAAATCTTCTCACTGCTTTGCTCTTCCCTGCCTCCCTCC
TCGTTCGTCAACGTCACCATTCTCTTCTTCCATTAAACAAGTTTCAGAGT
CGAGAAGGTTTCCTTTGCTTCAGGTTAGAGCCTCTTCCTCAGAAGAGACA
TCCACAGTTGATGCAGATGAACTTTTTTTCAGACTTGAAGGAAAAGTGGG
ATGCCGTTGAAAACAAGTCCACGGTACTTCTCTATGGAGGTGGGGCAATA
GTGGCTGTTTGGTTATCCTCAACTATTGTTGGTGCCATCAATTCAGTGCC
TTTGCTTCCCAAACTCTTGGAGTTGATTGGACTTGGTTATACTGGATGGT
TTGTCTACAGATACCTTCTCTTCAAGTCAAGCAAAAAAAAATAGCCACGG
ATATTGAAGCACTGAAAAAGAAGATTGCTGAACCTGAATAAATTTGTACA
TTCTGGAGGCAATTTCAGGTTTGGTCCCTGAATAAGCAATTAATTTTGGC
CACCCTACCTTTGGAAAAATGAAGGGACTTGGAAACCAGAAAAAATAAGC
TGGCGAAAGGAATCCTTTTTATCCCTGGATTTTTCCAGTATATCCCCGGG
AAAAAAAAAATTTAAAAAATTAGGAGGAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAGGGGGGGGCCCTCCTCTAAAGAATCCAAGTTTAACACTACCC
CAGGTTGTGCGAATATACAGACTTTCTTTATAAAATGGGTCCCATTACAT
CAATTATTCCTTGGGCGCTGTATT
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