CX044233

Overview
NameCX044233
Unique NameCX044233
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length373
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044233 vs. ExPASy Swiss-Prot
Match: CYSK_MAIZE (Cysteine synthase OS=Zea mays PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.201e-14
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 2
Query:   35 KRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAESMVFEP 157
            KRPENAGKL VVVFPSFGERYLSSVLF+S+KKEAESMV EP
Sbjct:  285 KRPENAGKLFVVVFPSFGERYLSSVLFQSIKKEAESMVVEP 325          
BLAST of CX044233 vs. ExPASy Swiss-Prot
Match: CYSK_CITLA (Cysteine synthase OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.461e-14
Identity = 36/41 (87.80%), Postives = 39/41 (95.12%), Query Frame = 2
Query:   35 KRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAESMVFEP 157
            KRPENAGKLIV VFPSFGERYLS+VLFESVK+E E+MVFEP
Sbjct:  285 KRPENAGKLIVAVFPSFGERYLSTVLFESVKRETENMVFEP 325          
BLAST of CX044233 vs. ExPASy Swiss-Prot
Match: CYSK2_ORYSJ (Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.461e-14
Identity = 35/41 (85.37%), Postives = 40/41 (97.56%), Query Frame = 2
Query:   35 KRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAESMVFEP 157
            +RPEN GKL+VVVFPSFGERYLSSVLFES+K+EAE+MVFEP
Sbjct:  285 QRPENKGKLVVVVFPSFGERYLSSVLFESIKREAENMVFEP 325          
BLAST of CX044233 vs. ExPASy Swiss-Prot
Match: CYSK_SPIOL (Cysteine synthase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.710e-13
Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = 2
Query:   35 KRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAESMVFE 154
            KRPENAGKLIV VFPSFGERYLSSVLF+SV+KEAESMV E
Sbjct:  285 KRPENAGKLIVAVFPSFGERYLSSVLFDSVRKEAESMVIE 324          
BLAST of CX044233 vs. ExPASy Swiss-Prot
Match: CYSK_SOLTU (Cysteine synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.540e-13
Identity = 34/41 (82.93%), Postives = 39/41 (95.12%), Query Frame = 2
Query:   35 KRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAESMVFEP 157
            KRPENAGKLIVV+FPSFGERYLSSVLFE+V++EAE+M  EP
Sbjct:  285 KRPENAGKLIVVIFPSFGERYLSSVLFETVRREAENMTVEP 325          
BLAST of CX044233 vs. ExPASy Swiss-Prot
Match: CYSK_WHEAT (Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.030e-12
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 2
Query:   35 KRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAESMVFE 154
            +RPENAGKL VVVFPSFGERYLSSVLF S+KKEAESMV E
Sbjct:  286 QRPENAGKLFVVVFPSFGERYLSSVLFHSIKKEAESMVVE 325          
BLAST of CX044233 vs. ExPASy Swiss-Prot
Match: CYSK1_ORYSJ (Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS1 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 5.111e-12
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 2
Query:   35 KRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAESMVFE 154
            +RPEN GKL VVVFPSFGERYLSSVLF+S+KKEAE+MV E
Sbjct:  282 QRPENEGKLFVVVFPSFGERYLSSVLFQSIKKEAENMVVE 321          
BLAST of CX044233 vs. ExPASy Swiss-Prot
Match: CYSK2_BRAJU (Cysteine synthase OS=Brassica juncea PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.675e-12
Identity = 32/40 (80.00%), Postives = 36/40 (90.00%), Query Frame = 2
Query:   35 KRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAESMVFE 154
            KRPENAGKL V VFPSFGERYLS+VLF++ +KEAESM FE
Sbjct:  284 KRPENAGKLFVAVFPSFGERYLSTVLFDATRKEAESMTFE 323          
BLAST of CX044233 vs. ExPASy Swiss-Prot
Match: CYSK1_BRAJU (Cysteine synthase OS=Brassica juncea PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.487e-11
Identity = 31/40 (77.50%), Postives = 36/40 (90.00%), Query Frame = 2
Query:   35 KRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAESMVFE 154
            KRPENAGKL V VFPSFGERYLS+VLF++ +KEAESM F+
Sbjct:  282 KRPENAGKLFVAVFPSFGERYLSTVLFDATRKEAESMTFQ 321          
BLAST of CX044233 vs. ExPASy Swiss-Prot
Match: CYSK1_ARATH (Cysteine synthase OS=Arabidopsis thaliana GN=OASA1 PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 5.651e-11
Identity = 29/40 (72.50%), Postives = 36/40 (90.00%), Query Frame = 2
Query:   35 KRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAESMVFE 154
            +RPENAGKL V +FPSFGERYLS+VLF++ +KEAE+M FE
Sbjct:  282 QRPENAGKLFVAIFPSFGERYLSTVLFDATRKEAEAMTFE 321          
The following BLAST results are available for this feature:
BLAST of CX044233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
CYSK_MAIZE3.201e-1490.24Cysteine synthase OS=Zea mays PE=1 SV=2[more]
CYSK_CITLA5.461e-1487.80Cysteine synthase OS=Citrullus lanatus PE=2 SV=1[more]
CYSK2_ORYSJ5.461e-1485.37Cysteine synthase OS=Oryza sativa subsp. japonica ... [more]
CYSK_SPIOL2.710e-1390.00Cysteine synthase OS=Spinacia oleracea PE=1 SV=1[more]
CYSK_SOLTU3.540e-1382.93Cysteine synthase OS=Solanum tuberosum PE=2 SV=1[more]
CYSK_WHEAT1.030e-1287.50Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=... [more]
CYSK1_ORYSJ5.111e-1282.50Cysteine synthase OS=Oryza sativa subsp. japonica ... [more]
CYSK2_BRAJU6.675e-1280.00Cysteine synthase OS=Brassica juncea PE=2 SV=1[more]
CYSK1_BRAJU1.487e-1177.50Cysteine synthase OS=Brassica juncea PE=2 SV=1[more]
CYSK1_ARATH5.651e-1172.50Cysteine synthase OS=Arabidopsis thaliana GN=OASA1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_16C04_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-16C04-E8-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044233 ID=CX044233; Name=CX044233; organism=Citrus sinensis; type=EST; length=373bp
CGGAGCTGCTACTGCAGCTGCAATTCAGATAGCAAAGAGGCCGGAAAATG
CTGGAAAACTCATTGTGGTGGTCTTCCCCAGCTTCGGAGAGCGATACCTC
TCTTCTGTTTTATTTGAATCTGTGAAAAAGGAGGCAGAGAGCATGGTGTT
TGAGCCGTGAGATATGCCCAAACCTTTTGAGTCACCAGTCCCGTATTCTG
TGGGGACTAACTTGCTTTTCTAGTCAGAATTTCATTTTGGTTGGATGCTT
TCGCATCTTCATGTTTTCTTATAAACAACTACAAATCTTTGCAATTCCTT
ACCCTGTGGAGGAGGTTTCACTGTTTGTGTAAAAATCTGTGGAAACTTAT
ATGGGTTAAAAAAAAAAAAAAAA
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