EY719715

Overview
NameEY719715
Unique NameEY719715
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY719715 vs. ExPASy Swiss-Prot
Match: PCXB_BURCE (Protocatechuate 3,4-dioxygenase beta chain OS=Burkholderia cepacia GN=pcaH PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 4.652e-67
Identity = 126/199 (63.32%), Postives = 146/199 (73.37%), Query Frame = 3
Query:    6 RSPSKPLVPLSHSLSEITGPTIGAERINEKDSDLT--AQHEGEPQGERIIIHGRVLDENGLPVPGILVEIWQANAAGRYNHKRDQHDAPLDPNFTGTGRTVTDAEGWYQFQTIKPGAYPWGNHHNAWRPAHIHFSLFGPSVLTRLVTQMYFPGDPLLAYDPIYNCVPDTSAKERLIASFDLKKTIPHYALGNRWDIVLR 596
            R P++P++PL   L +   P  GAE +   D DLT  A   GEP GERI++ GRVLDE G PV   LVE+WQANAAGRY HK DQHDAPLDPNF G GR +TDAEG Y+F TIKPGAYPWGNH NAWRP HIHFSLFG    +RLVTQMYFPGDPLLAYDPI+   P+ +A++RLI+ F L  T   +ALG  +DIVLR
Sbjct:   29 RGPTRPMIPLKERLRDQYAPVYGAEDLGPLDHDLTKNAVKNGEPLGERIVVTGRVLDEGGKPVRNTLVEVWQANAAGRYVHKVDQHDAPLDPNFLGAGRCMTDAEGRYRFLTIKPGAYPWGNHPNAWRPNHIHFSLFGDYFGSRLVTQMYFPGDPLLAYDPIFQGTPE-AARDRLISRFSLDTTEEGHALGYEFDIVLR 226          
BLAST of EY719715 vs. ExPASy Swiss-Prot
Match: PCXB_PSEPU (Protocatechuate 3,4-dioxygenase beta chain OS=Pseudomonas putida GN=pcaH PE=1 SV=3)

HSP 1 Score: 213.386 bits (542), Expect = 6.967e-55
Identity = 104/199 (52.26%), Postives = 130/199 (65.33%), Query Frame = 3
Query:    6 RSPSKPLVPLSHSLSEITGPTIGAERINEKDSDLTAQHE--GEPQGERIIIHGRVLDENGLPVPGILVEIWQANAAGRYNHKRDQHDAPLDPNFTGTGRTVTDAEGWYQFQTIKPGAYPWGNHHNAWRPAHIHFSLFGPSVLTRLVTQMYFPGDPLLAYDPIYNCVPDTSAKERLIASFDLKKTIPHYALGNRWDIVLR 596
            RSP + LV +  S+SE TGP          D DL       G P GERII+ GRV+D+ G PVP  LVE+WQANA GRY HK D++ APLDPNF G GR +TD++G+Y F+TIKPG YPW N  N WRPAHIHF + GPS+ T+L+TQ+YF GDPL+   PI   + +  A ++LIA  D+    P   L  R+DIVLR
Sbjct:   31 RSPRQALVSIPQSISETTGPNFSHLGFGAHDHDLLLNFNNGGLPIGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPYPWRNGPNDWRPAHIHFGISGPSIATKLITQLYFEGDPLIPMCPIVKSIANPEAVQQLIAKLDMNNANPMDCLAYRFDIVLR 229          
BLAST of EY719715 vs. ExPASy Swiss-Prot
Match: PCXB_ACIAD (Protocatechuate 3,4-dioxygenase beta chain OS=Acinetobacter sp. (strain ADP1) GN=pcaH PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 2.835e-48
Identity = 95/200 (47.50%), Postives = 122/200 (61.00%), Query Frame = 3
Query:    3 LRSPSKPLVPLSHSLSEITGPTIGAERINEKDSDLTAQH--EGEPQGERIIIHGRVLDENGLPVPGILVEIWQANAAGRYNHKRDQHDAPLDPNFTGTGRTVTDAEGWYQFQTIKPGAYPWGNHHNAWRPAHIHFSLFGPSVLTRLVTQMYFPGDPLLAYDPIYNCVPDTSAKERLIASFDLKKTIPHYALGNRWDIVLR 596
            LRSP   L+ ++ +LSE+T P   A++   KD+DL   +  +G P GER+I+HG V D+ G PV   LVE+WQANA+GRY H  DQ+   +DPNF G GR +TD  G+Y F+TIKPG YPW N  N WRPAHIHFSL       RL++Q YF GD L+   PI   +P    +  LIA  D    I   +   R+DI LR
Sbjct:   30 LRSPKNALISIAETLSEVTAPHFSADKFGPKDNDLILNYAKDGLPIGERVIVHGYVRDQFGRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYPWRNRINEWRPAHIHFSLIADGWAQRLISQFYFEGDTLIDSCPILKTIPSEQQRRALIALEDKSNFIEADSRCYRFDITLR 229          
BLAST of EY719715 vs. ExPASy Swiss-Prot
Match: PCXA_ACIAD (Protocatechuate 3,4-dioxygenase alpha chain OS=Acinetobacter sp. (strain ADP1) GN=pcaG PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 4.415e-17
Identity = 50/135 (37.04%), Postives = 74/135 (54.81%), Query Frame = 3
Query:  132 QGERIIIHGRVLDENGLPVPGILVEIWQANAAGRYNHKRDQHDAPLDPNFTGTGRTVTD-AEGWYQFQTIKPGAYPWGNHHNAWRPAHIHFSLFGPSVLTRLVTQMYFPGD-PLLAYDPIYNCVPDTSAKERLIA 530
            QG+RI + G+V D  GLP+  +L+EIWQA+  G Y  + D     +DPNF G GRT  D   G++ F TIKPGA P      + +  HI   +F   +   L T++YF  +    A DP+ N +   + ++ L+A
Sbjct:   49 QGQRIRLEGQVFDGLGLPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAVP--GRKGSTQAPHISLIIFARGINIGLHTRVYFDDEAEANAKDPVLNSIEWATRRQTLVA 181          
BLAST of EY719715 vs. ExPASy Swiss-Prot
Match: HQD2_CANAL (Catechol 1,2-dioxygenase OS=Candida albicans GN=HQD2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.125e-12
Identity = 48/150 (32.00%), Postives = 72/150 (48.00%), Query Frame = 3
Query:  129 PQGERIIIHGRVLDENGLPVPGILVEIWQANAAGRYNHKRDQHDAPLDPNFTGTGRTVTDAEGWYQFQTIKPGAYP-------------WGNHHNAWRPAHIHFSLFGPSVLTRLVTQMYFPGDPLLAYDPIYNCVPDTSAKERLIASFD 539
            P   +  + G+V D  G P+ G  +E+WQ N+AG Y+ + D HD    P F   G  +TD EG Y F+ ++P +YP                H N  RP+HIH+ +  P   T L+TQ+Y    P    D +Y      + K+ +I  F+
Sbjct:  121 PTDVKCFVRGKVTDTEGKPLGGAQLEVWQCNSAGFYSQQAD-HDG---PEFNLRGTFITDDEGNYSFECLRPTSYPIPYDGPAGDLLKIMDRHPN--RPSHIHWRVSHPGYHT-LITQIYDAECPYTNNDSVY------AVKDDIIVHFE 257          
BLAST of EY719715 vs. ExPASy Swiss-Prot
Match: CATA1_ACILW (Catechol 1,2-dioxygenase 1 OS=Acinetobacter lwoffii GN=catA1 PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 5.585e-12
Identity = 53/148 (35.81%), Postives = 70/148 (47.30%), Query Frame = 3
Query:  144 IIIHGRVLDENGLPVPGILVEIWQANAAGRYNHKRDQHDAPLDPNFTGTGRTVTDAEGWYQFQTIKPGAY-------------PWGNHHNAWRPAHIHFSLFGPSVLTRLVTQMYFPGDPLLAYDPIYNCVPDTSAKERLIASFDLKK 548
            ++IHG V   +G PV G +VE W AN+ G Y+H  D   A  D N  G  +  T A+G Y+F+T+ P  Y               G H N  RPAH+HF +   S   +L TQ    GDPL+  D  Y      + +E LI     KK
Sbjct:  134 LVIHGTVTGPDGKPVAGAVVECWHANSKGFYSH-FDPTGAQSDFNLRGAVK--TGADGKYEFRTLMPVGYGCPPQGATQQLLNVLGRHGN--RPAHVHFFVSSDSA-RKLTTQFNIEGDPLIWDDFAY------ATREELIPPVTEKK 269          
BLAST of EY719715 vs. ExPASy Swiss-Prot
Match: CATA2_ACILW (Catechol 1,2-dioxygenase 2 OS=Acinetobacter lwoffii GN=catA2 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.244e-11
Identity = 44/128 (34.38%), Postives = 61/128 (47.66%), Query Frame = 3
Query:  120 EGEPQGERIIIHGRVLDENGLPVPGILVEIWQANAAGRYNHKRDQHDAPLDPNFTGTGRTVTDAEGWYQFQTIKPGAY---PWGN--------HHNAWRPAHIHFSLFGPSVLTRLVTQMYFPGDPLL 470
            +G   G+ +++ GRV  E+G P+   LVE+W AN  G Y++          P F       TDAEG Y F+++ P  Y   P G           +  RPAHIHF +  P    +L TQ+   GDP L
Sbjct:  120 DGTDPGQTLVMRGRVFGEDGKPLANALVEVWHANHLGNYSYFDKS-----QPAFNLRRSIRTDAEGKYSFRSVVPVGYSVPPQGQTQLLLDQLGRHGHRPAHIHFFVSAPG-FRKLTTQINIDGDPYL 241          
BLAST of EY719715 vs. ExPASy Swiss-Prot
Match: CATA_ACIAD (Catechol 1,2-dioxygenase OS=Acinetobacter sp. (strain ADP1) GN=catA PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.728e-11
Identity = 46/139 (33.09%), Postives = 60/139 (43.17%), Query Frame = 3
Query:  126 EPQGERIIIHGRVLDENGLPVPGILVEIWQANAAGRYNHKRDQHDAPLDPN-----FTGTGRTVTDAEGWYQFQTIKPGAY-------------PWGNHHNAWRPAHIHFSLFGPSVLTRLVTQMYFPGDPLLAYDPIY 488
            +P G  +I+HG + D +G P+P   VEIW AN  G Y+H         DP      F      +TD  G Y+ +TI P  Y               G H N  RPAHIH+ +       +L TQ+   GDP    D  Y
Sbjct:  128 DPNGHTLILHGTIFDADGKPLPNAKVEIWHANTKGFYSH--------FDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGCPPEGPTQQLLNQLGRHGN--RPAHIHYFVSADG-HRKLTTQINVAGDPYTYDDFAY 255          
The following BLAST results are available for this feature:
BLAST of EY719715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PCXB_BURCE4.652e-6763.32Protocatechuate 3,4-dioxygenase beta chain OS=Burk... [more]
PCXB_PSEPU6.967e-5552.26Protocatechuate 3,4-dioxygenase beta chain OS=Pseu... [more]
PCXB_ACIAD2.835e-4847.50Protocatechuate 3,4-dioxygenase beta chain OS=Acin... [more]
PCXA_ACIAD4.415e-1737.04Protocatechuate 3,4-dioxygenase alpha chain OS=Aci... [more]
HQD2_CANAL1.125e-1232.00Catechol 1,2-dioxygenase OS=Candida albicans GN=HQ... [more]
CATA1_ACILW5.585e-1235.81Catechol 1,2-dioxygenase 1 OS=Acinetobacter lwoffi... [more]
CATA2_ACILW1.244e-1134.38Catechol 1,2-dioxygenase 2 OS=Acinetobacter lwoffi... [more]
CATA_ACIAD4.728e-1133.09Catechol 1,2-dioxygenase OS=Acinetobacter sp. (str... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-105-H04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY719715 ID=EY719715; Name=EY719715; organism=Citrus sinensis; type=EST; length=598bp
ACCTGCGTTCGCCGTCCAAGCCGTTGGTGCCCCTTTCCCATTCCTTGTCG
GAAATCACCGGCCCGACTATCGGCGCCGAGCGCATCAACGAGAAGGACAG
CGACCTGACCGCCCAGCATGAAGGCGAGCCCCAGGGCGAACGCATCATCA
TTCACGGGCGTGTGCTGGACGAAAACGGCTTGCCCGTGCCCGGCATCCTC
GTGGAAATCTGGCAGGCCAATGCTGCCGGCCGCTACAACCACAAGCGCGA
CCAGCACGACGCGCCGCTGGACCCGAACTTCACCGGCACCGGGCGCACCG
TCACCGACGCCGAGGGCTGGTACCAGTTCCAGACCATCAAGCCCGGCGCC
TACCCGTGGGGCAACCACCACAACGCGTGGCGCCCGGCGCACATCCACTT
CTCGCTGTTCGGCCCGAGTGTGCTGACGCGGTTGGTGACGCAGATGTATT
TCCCCGGCGACCCGCTGCTGGCCTACGACCCGATCTACAACTGCGTCCCG
GACACGTCCGCCAAGGAACGCCTGATCGCCAGTTTCGACCTGAAAAAAAC
CATTCCGCACTATGCCCTCGGGAACCGCTGGGACATCGTCCTGCGCGG
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