CN190104

Overview
NameCN190104
Unique NameCN190104
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN190104 vs. ExPASy Swiss-Prot
Match: SCRK5_ARATH (Putative fructokinase-5 OS=Arabidopsis thaliana GN=At4g10260 PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.454e-71
Identity = 134/201 (66.67%), Postives = 159/201 (79.10%), Query Frame = -2
Query:  216 SELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 818
            SEL+K+LIK+  IFHYGSISLI+EPCR+  +AAM  AK++G +LSYDPN+RLPLWPS EAA EGI SIW++ADIIKVSDDE+TFLT GD   DD  V+  L H  LKLLIVT+G KGCRYYTK+FKGRVPG   KAVDTTGAGDSFV   L  L  D +++ DE +L+EAL FANACGA+  T++GAIPALPT   A KL+
Sbjct:  121 SELNKDLIKKAKIFHYGSISLISEPCRTAHMAAMKTAKDAGVLLSYDPNVRLPLWPSTEAAIEGIKSIWNEADIIKVSDDEVTFLTRGDAEKDD--VVLSLMHDKLKLLIVTDGEKGCRYYTKKFKGRVPGYAVKAVDTTGAGDSFVGAFLVSLGKDGSILDDEGKLKEALAFANACGAVCTTQKGAIPALPTPADAQKLM 319          
BLAST of CN190104 vs. ExPASy Swiss-Prot
Match: SCRK2_MAIZE (Fructokinase-2 OS=Zea mays GN=FRK2 PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.468e-65
Identity = 119/201 (59.20%), Postives = 154/201 (76.62%), Query Frame = -2
Query:  216 SELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 818
            +ELD  L+++  +FHYGSISLI+EPCRS  +AAM  AK +G + SYDPN+RLPLWPS +AAREGI+SIW +AD IKVSDDE+ FLT GD +++ NV+   L+   LKLL+VT+G KGCRY+TK+FKG VPG K   VDTTGAGD+FV  +L  +A D ++  +E +LREAL F+NACGA+  T++GAIPALPT   A  L+
Sbjct:  133 AELDLGLVRRARVFHYGSISLISEPCRSAHMAAMRAAKAAGVLCSYDPNVRLPLWPSPDAAREGILSIWKEADFIKVSDDEVAFLTRGDANDEKNVL--SLWFDGLKLLVVTDGDKGCRYFTKDFKGSVPGFKVDTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPTVATAQDLI 331          
BLAST of CN190104 vs. ExPASy Swiss-Prot
Match: SCRK2_ORYSJ (Fructokinase-2 OS=Oryza sativa subsp. japonica GN=FRK2 PE=1 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.530e-65
Identity = 121/205 (59.02%), Postives = 155/205 (75.61%), Query Frame = -2
Query:  204 SELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTVA 818
            +EL+ +LI++  IFHYGSISLI EPCRS  +AAM  AK +G + SYDPN+RLPLWPSE+AAR GI+SIW +AD IKVSDDE+ FLT GD +++ NV+   L+   LKLLIVT+G KGCRY+TK+FKG VPG     VDTTGAGD+FV  +L  +A D ++  +E +LREAL F+NACGA+  T++GAIPALPT   A +L+   A
Sbjct:  133 AELNLDLIRRAKIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDPNVRLPLWPSEDAARAGILSIWKEADFIKVSDDEVAFLTQGDANDEKNVL--SLWFDGLKLLIVTDGEKGCRYFTKDFKGSVPGFSVNTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPTVAVAQELISKAA 335          
BLAST of CN190104 vs. ExPASy Swiss-Prot
Match: SCRK2_ORYSI (Fructokinase-2 OS=Oryza sativa subsp. indica GN=FRK2 PE=1 SV=2)

HSP 1 Score: 248.054 bits (632), Expect = 4.530e-65
Identity = 121/205 (59.02%), Postives = 155/205 (75.61%), Query Frame = -2
Query:  204 SELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTVA 818
            +EL+ +LI++  IFHYGSISLI EPCRS  +AAM  AK +G + SYDPN+RLPLWPSE+AAR GI+SIW +AD IKVSDDE+ FLT GD +++ NV+   L+   LKLLIVT+G KGCRY+TK+FKG VPG     VDTTGAGD+FV  +L  +A D ++  +E +LREAL F+NACGA+  T++GAIPALPT   A +L+   A
Sbjct:  133 AELNLDLIRRAKIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDPNVRLPLWPSEDAARAGILSIWKEADFIKVSDDEVAFLTQGDANDEKNVL--SLWFDGLKLLIVTDGEKGCRYFTKDFKGSVPGFSVNTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPTVAVAQELISKAA 335          
BLAST of CN190104 vs. ExPASy Swiss-Prot
Match: SCRK2_ARATH (Probable fructokinase-2 OS=Arabidopsis thaliana GN=At1g06030 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.248e-64
Identity = 122/200 (61.00%), Postives = 150/200 (75.00%), Query Frame = -2
Query:  216 ELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 815
            EL+  LI+   +FHYGSISLI EPCRS  + AM +AKE+G++LSYDPNLR PLWPS E AR+ IMSIWD+ADIIKVSD E+ FLTG    +D+  +   L+HPNLKLL+VT G  GCRYYTK+F G V      AVDTTGAGDSFV  +LN +  DQ+++++E RLR+ L FANACGA+T T++GAIPALPT   AL  L
Sbjct:  127 ELNLELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREPLWPSPEEARKQIMSIWDKADIIKVSDVELEFLTGNKTIDDETAM--SLWHPNLKLLLVTLGENGCRYYTKDFHGSVETFHVDAVDTTGAGDSFVGALLNQIVDDQSVLEEEERLRKVLRFANACGAITTTKKGAIPALPTDCEALSFL 324          
BLAST of CN190104 vs. ExPASy Swiss-Prot
Match: SCRK2_SOLLC (Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=2 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 3.835e-64
Identity = 119/201 (59.20%), Postives = 152/201 (75.62%), Query Frame = -2
Query:  216 SELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 818
            +EL+ +LI+   +FHYGSISLI EPCR+  + AM +AKE+G++LSYDPNLRLPLWPS E A++ I SIWD AD+IKVSD E+ FLTG +  +D++ +   L+HPNLKLL+VT G KGC YYTK+F G V G   K VDTTGAGDSFV  +L  +  DQ +++DE RL+E L F+ ACGA+T T++GAIPALPT   AL LL
Sbjct:  126 AELNLDLIRSAKVFHYGSISLIVEPCRAAHMKAMEVAKEAGALLSYDPNLRLPLWPSAEEAKKQIKSIWDSADVIKVSDVELEFLTGSNKIDDESAM--SLWHPNLKLLLVTLGEKGCNYYTKKFHGTVGGFHVKTVDTTGAGDSFVGALLTKIVDDQTILEDEARLKEVLRFSCACGAITTTKKGAIPALPTASEALTLL 324          
BLAST of CN190104 vs. ExPASy Swiss-Prot
Match: SCRK2_SOLHA (Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.541e-64
Identity = 119/201 (59.20%), Postives = 151/201 (75.12%), Query Frame = -2
Query:  216 SELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 818
            +EL+ +LI+   +FHYGSISLI EPCR+  + AM +AKE+G++LSYDPNLRLPLWPS E A++ I SIWD AD+IKVSD E+ FLTG +  +D++ +   L+HPNLKLL+VT G KGC YYTK+F G V G   K VDTTGAGDSFV  +L  +  DQ ++ DE RL+E L F+ ACGA+T T++GAIPALPT   AL LL
Sbjct:  126 AELNLDLIRSAKVFHYGSISLIVEPCRAAHMKAMEVAKEAGALLSYDPNLRLPLWPSAEEAKKQIKSIWDSADVIKVSDVELEFLTGSNKIDDESAM--SLWHPNLKLLLVTLGEKGCNYYTKKFHGTVGGFHVKTVDTTGAGDSFVGALLTKIVDDQTILADEARLKEVLRFSCACGAITTTKKGAIPALPTASEALTLL 324          
BLAST of CN190104 vs. ExPASy Swiss-Prot
Match: SCRK1_ARATH (Probable fructokinase-1 OS=Arabidopsis thaliana GN=At2g31390 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.541e-64
Identity = 119/192 (61.98%), Postives = 150/192 (78.12%), Query Frame = -2
Query:  240 ELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPT 815
            EL+ +LI+   +FHYGSISLI EPCRS  L AM +AKE+G++LSYDPNLR PLWPS+E A+  IMSIWD+A+IIKVSD E+ FLTG +  +D+  +   L+HPNLKLL+VT G KGCRYYTK FKG V      AVDTTGAGDSFV  +LN +  D+++++DE RLR+ L FANACGA+T T++GAIPALP+
Sbjct:  125 ELNLDLIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLREPLWPSKEEAKTQIMSIWDKAEIIKVSDVELEFLTGSNKIDDETALT--LWHPNLKLLLVTLGEKGCRYYTKTFKGAVDPFHVNAVDTTGAGDSFVGALLNQIVDDRSVLEDEERLRKVLRFANACGAITTTKKGAIPALPS 314          
BLAST of CN190104 vs. ExPASy Swiss-Prot
Match: SCRK4_ARATH (Probable fructokinase-4 OS=Arabidopsis thaliana GN=At3g59480 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.486e-63
Identity = 118/200 (59.00%), Postives = 152/200 (76.00%), Query Frame = -2
Query:  216 ELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 815
            EL+ ++I+   +FHYGSISLI EPCRS  L AM +AKE+G++LSYDPNLRLPLWPS+E A++ I+SIWD+A++IKVSD+E+ FLTG D  +D+  +   L+H NLKLL+VT G KGCRYYTK F+G V      AVDTTGAGDSFV  +L  +  D+ +++DE RLRE L  ANACGA+T T++GAIPALPT+     LL
Sbjct:  126 ELNLDVIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLRLPLWPSKEEAQKQILSIWDKAEVIKVSDEELMFLTGSDKVDDETAL--SLWHSNLKLLLVTLGEKGCRYYTKSFRGSVDPFHVDAVDTTGAGDSFVGALLCKIVDDRAVLEDEARLREVLRLANACGAITTTKKGAIPALPTESEVQSLL 323          
BLAST of CN190104 vs. ExPASy Swiss-Prot
Match: SCRK1_ORYSJ (Fructokinase-1 OS=Oryza sativa subsp. japonica GN=FRK1 PE=1 SV=2)

HSP 1 Score: 242.276 bits (617), Expect = 2.486e-63
Identity = 116/203 (57.14%), Postives = 155/203 (76.35%), Query Frame = -2
Query:  210 SELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHT 818
            +EL+  LIK+ ++FHYGSISLIAEPCRS  L AM +AKE+G++LSYDPNLR  LWPS E AR  I+SIWDQADI+KVS+ E+ FLTG D   DD  V+ KL+ P +KLL+VT G +GC+YY ++F+G VP  K + VDTTGAGD+FV  +L  +  D + ++D+ +L EA+ FANACGA+T T++GAIP+LPT+   LKL+ +
Sbjct:  122 AELNVELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEARTKILSIWDQADIVKVSEVELEFLTGIDSVEDD--VVMKLWRPTMKLLLVTLGDQGCKYYARDFRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKKGAIPSLPTEVEVLKLMES 322          
The following BLAST results are available for this feature:
BLAST of CN190104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
SCRK5_ARATH1.454e-7166.67Putative fructokinase-5 OS=Arabidopsis thaliana GN... [more]
SCRK2_MAIZE3.468e-6559.20Fructokinase-2 OS=Zea mays GN=FRK2 PE=1 SV=1[more]
SCRK2_ORYSJ4.530e-6559.02Fructokinase-2 OS=Oryza sativa subsp. japonica GN=... [more]
SCRK2_ORYSI4.530e-6559.02Fructokinase-2 OS=Oryza sativa subsp. indica GN=FR... [more]
SCRK2_ARATH2.248e-6461.00Probable fructokinase-2 OS=Arabidopsis thaliana GN... [more]
SCRK2_SOLLC3.835e-6459.20Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=... [more]
SCRK2_SOLHA6.541e-6459.20Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=... [more]
SCRK1_ARATH6.541e-6461.98Probable fructokinase-1 OS=Arabidopsis thaliana GN... [more]
SCRK4_ARATH2.486e-6359.00Probable fructokinase-4 OS=Arabidopsis thaliana GN... [more]
SCRK1_ORYSJ2.486e-6357.14Fructokinase-1 OS=Oryza sativa subsp. japonica GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0002O16_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002O16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN190104 ID=CN190104; Name=CN190104; organism=Citrus sinensis; type=EST; length=819bp
CCCTTTTTCGATAATTGGTTCACTAATTTTATTGATCATAATTCTAGCAT
CTAGAACACTACTATTCAATGCAAATAGGCTATGCAACTTTCTTAAACTG
AAGGGGAAAAAAGAGCAAAGTGCTCCAAACAGAGCTCAAAATACAACTTG
ATACAGAAGAAAAATACGAAACATTAAATTTCTGCTTGATGCATTTACAA
CGCTGCAACAGTGTGTAAGAGTTTGAGCGCAGCTTCTTTTGTAGGCAGTG
CAGGAATTGCACCTCTCTCTGTAACCGTGAGGGCACCACAGGCATTTGCA
AAAAGTAAAGCTTCTCTTAACCGATTCTCATCCTTGATCAGGTTTTGATC
AGCAGCTAAGCAATTAAGTATTCCACTGACAAATGAATCACCGGCACCAG
TGGTGTCAACAGCTTTCGTTTTAACACCAGGAACCCTGCCTTTGAATTCC
TTAGTGTAATATCTACAACCTTTTGAACCTTCAGTGACAATCAAAAGCTT
GAGATTAGGATGAAACAGCTTCTCTAACACCACGTTATCATCATTATGAT
CATCACCTCCAGTTAAGAATGTAATTTCATCATCGCTTACCTTTATTATA
TCTGCTTGATCCCATATACTCATTATGCCCTCGCGAGCAGCCTCTTCTGA
TGGCCATAGTGGCAATCTCAAATTAGGATCATAGGAGAGGATGCTACCAG
ACTCTTTGGCCAAGTTCATGGCAGCAAGTTGAGTTGACCTGCATGGTTCT
GCAATTAAACTAATTGAACCATAGTGGAAGATGCTGCCCTGCTTAATGAG
GTTTTTGTCAAGTTCCGAT
back to top