CN190063

Overview
NameCN190063
Unique NameCN190063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length539
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN190063 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.909e-12
Identity = 31/85 (36.47%), Postives = 52/85 (61.18%), Query Frame = -3 
Query:  217 LEKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTKFVNHPLIKENLPARDQMLVYFR 471
            L+ +E E K K    F  GE   G +++A  +I +W+P+++E    Q+   +KFP++ +WS +F+NHP + E LP RD +  YF+
Sbjct:  135 LQFLENELKDKK---FFGGEE-FGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYFK 215
The following BLAST results are available for this feature:
BLAST of CN190063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GSTX6_SOYBN9.909e-1236.47Probable glutathione S-transferase OS=Glycine max ... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0002N15_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002N15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN190063 ID=CN190063; Name=CN190063; organism=Citrus sinensis; type=EST; length=539bp
TTTTTTTTTTTTTTATGAAGAAGAGTGAGAAAATTTTAACTAATTAAAGA
GTAATTTTATTACAAAATTGAAATAAAGATGCAAAGAAAGAGGAAAATAA
AATACAAGTCATTACAACACACCACAACACCACCTTTATTAGCACAGATA
TTATTTGATCAATAATTCTTGGATGCTCTATGCTCGGAATAAGGTAAAGA
ACTCTTCACTGACTTTGCGGAAATAGACGAGCATCTGGTCCCTGGCCGGC
AAGTTTTCTTTGATGAGAGGGTGATTCACAAACTTGGTGCTCCATTCAGT
GATGACTGGAAATTTCTGAGGGTCAAGAACTTGAAAGGATCCAGCTTCTT
CCCAAACAGGCAGCCAGTAAAGAATCCAACCAAATGCAAGTTCCAAATAC
CCAATATTGCTCTCTCCTTCAGCAAACAATAAGCCGCTCTTTCCCTTGAA
TTCCCCTTCTATCTTCTCCAATCCTTCTGCAAATTCTTTCGCATTTTTCT
CCTTTGCCTCTCCTTTCAAAACCAGAGCCATAAATGCTT
back to top