CN190059

Overview
NameCN190059
Unique NameCN190059
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length687
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN190059 vs. ExPASy Swiss-Prot
Match: B3GT3_ARATH (Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.369e-32
Identity = 54/76 (71.05%), Postives = 68/76 (89.47%), Query Frame = -2
Query:  459 EDVSLGSWFIGLEVEHIDDRNMCCQTPPDCEWKAQAGNVCVASFDWSCSGICKSVEKIRSVHEKCGEEDSAIWGVR 686
            EDV+LG+WFIGL+V HIDDR +CC TPPDCEWKAQAGN+CVASFDW+CSGIC+S ++I+ VH++CGE ++AIW  R
Sbjct:  333 EDVTLGAWFIGLDVTHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHKRCGEPENAIWKAR 408          
BLAST of CN190059 vs. ExPASy Swiss-Prot
Match: B3GT7_ARATH (Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.318e-32
Identity = 57/73 (78.08%), Postives = 65/73 (89.04%), Query Frame = -2
Query:  468 EDVSLGSWFIGLEVEHIDDRNMCCQTPPDCEWKAQAGNVCVASFDWSCSGICKSVEKIRSVHEKCGEEDSAIW 686
            EDVSLGSWFIGLEVEHIDDRN CC TPPDC WKA+AG+VCVASF+WSCSGICKSVE+++ VHE C E + A+W
Sbjct:  317 EDVSLGSWFIGLEVEHIDDRNFCCGTPPDCRWKAEAGDVCVASFEWSCSGICKSVERMKIVHEVCSEGEGAVW 389          
BLAST of CN190059 vs. ExPASy Swiss-Prot
Match: B3GT2_ARATH (Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.086e-31
Identity = 53/73 (72.60%), Postives = 66/73 (90.41%), Query Frame = -2
Query:  468 EDVSLGSWFIGLEVEHIDDRNMCCQTPPDCEWKAQAGNVCVASFDWSCSGICKSVEKIRSVHEKCGEEDSAIW 686
            EDVSLG+WFIG++V+HIDDR +CC TPPDCEWKAQAGN+CVASFDWSCSGIC+S ++I+ VH +CGE + A+W
Sbjct:  331 EDVSLGAWFIGIDVKHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGEKALW 403          
BLAST of CN190059 vs. ExPASy Swiss-Prot
Match: B3GT6_ARATH (Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.128e-31
Identity = 56/73 (76.71%), Postives = 64/73 (87.67%), Query Frame = -2
Query:  468 EDVSLGSWFIGLEVEHIDDRNMCCQTPPDCEWKAQAGNVCVASFDWSCSGICKSVEKIRSVHEKCGEEDSAIW 686
            EDVSLGSWFIGL+VEHIDDR++CC TP DCEWK QAGN C ASFDWSCSGICKSV+++  VH++CGE D AIW
Sbjct:  323 EDVSLGSWFIGLDVEHIDDRSLCCGTPLDCEWKGQAGNPCAASFDWSCSGICKSVDRMLEVHQRCGEGDGAIW 395          
BLAST of CN190059 vs. ExPASy Swiss-Prot
Match: B3GT8_ARATH (Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana GN=B3GALT8 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.608e-29
Identity = 52/76 (68.42%), Postives = 63/76 (82.89%), Query Frame = -2
Query:  459 EDVSLGSWFIGLEVEHIDDRNMCCQTPPDCEWKAQAGNVCVASFDWSCSGICKSVEKIRSVHEKCGEEDSAIWGVR 686
            EDVSLG+W +GLEVEH+D+R+MCC TPPDC+WKAQAGNVC ASFDWSCSGICKSV+++  VH  C E D+ +   R
Sbjct:  317 EDVSLGAWMLGLEVEHVDERSMCCGTPPDCQWKAQAGNVCAASFDWSCSGICKSVDRMARVHRACAEGDTPLANFR 392          
BLAST of CN190059 vs. ExPASy Swiss-Prot
Match: B3GT4_ARATH (Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana GN=B3GALT4 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.243e-27
Identity = 50/72 (69.44%), Postives = 63/72 (87.50%), Query Frame = -2
Query:  471 EDVSLGSWFIGLEVEHIDDRNMCCQTPPDCEWKAQAGNVCVASFDWSCSGICKSVEKIRSVHEKCGEEDSAI 686
            EDVSLGSWF+GL+VEH+DDR +CC T  DCEWKAQAGN+CVASFDWSCSGIC+S ++++ VH +CGE + A+
Sbjct:  332 EDVSLGSWFLGLDVEHVDDRRLCCGTT-DCEWKAQAGNICVASFDWSCSGICRSADRMKDVHRRCGEGEKAL 402          
BLAST of CN190059 vs. ExPASy Swiss-Prot
Match: B3GT5_ARATH (Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.769e-27
Identity = 50/80 (62.50%), Postives = 63/80 (78.75%), Query Frame = -2
Query:  447 EDVSLGSWFIGLEVEHIDDRNMCCQTPPDCEWKAQAGNVCVASFDWSCSGICKSVEKIRSVHEKCGEEDSAIWGVRV*IS 686
            EDV+LGSWFIGLEVE IDDRN CC TPPDCE +A+AG +CVA+FDW CSG+C+SV+++  VH  CGE   A+W   + +S
Sbjct:  319 EDVTLGSWFIGLEVEQIDDRNFCCGTPPDCEMRAEAGEMCVATFDWKCSGVCRSVDRMWMVHVMCGEGSKAVWDANLKLS 398          
BLAST of CN190059 vs. ExPASy Swiss-Prot
Match: B3GT1_ARATH (Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 3.999e-26
Identity = 47/73 (64.38%), Postives = 58/73 (79.45%), Query Frame = -2
Query:  468 EDVSLGSWFIGLEVEHIDDRNMCCQTPPDCEWKAQAGNVCVASFDWSCSGICKSVEKIRSVHEKCGEEDSAIW 686
            EDVSLGSWFIGL VEH+D++ +CC T  DCE KA  G+VC ASFDW CSGIC+S E++  VHE+CGE  +A+W
Sbjct:  308 EDVSLGSWFIGLNVEHVDEKRLCCSTSQDCELKAMMGHVCAASFDWKCSGICRSAERMADVHERCGEPQNALW 380          
The following BLAST results are available for this feature:
BLAST of CN190059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
B3GT3_ARATH6.369e-3271.05Probable beta-1,3-galactosyltransferase 3 OS=Arabi... [more]
B3GT7_ARATH8.318e-3278.08Beta-1,3-galactosyltransferase 7 OS=Arabidopsis th... [more]
B3GT2_ARATH1.086e-3172.60Probable beta-1,3-galactosyltransferase 2 OS=Arabi... [more]
B3GT6_ARATH4.128e-3176.71Probable beta-1,3-galactosyltransferase 6 OS=Arabi... [more]
B3GT8_ARATH8.608e-2968.42Probable beta-1,3-galactosyltransferase 8 OS=Arabi... [more]
B3GT4_ARATH1.243e-2769.44Probable beta-1,3-galactosyltransferase 4 OS=Arabi... [more]
B3GT5_ARATH2.769e-2762.50Probable beta-1,3-galactosyltransferase 5 OS=Arabi... [more]
B3GT1_ARATH3.999e-2664.38Probable beta-1,3-galactosyltransferase 1 OS=Arabi... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0002N12_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002N12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN190059 ID=CN190059; Name=CN190059; organism=Citrus sinensis; type=EST; length=687bp
TTTTTTTTTTTTTTTTTGAATTGAAGCAGAAATTATTCTATTTACATGAA
AGAAATTTGAGGACAAATATATGTGGTCGTTCACAGACCTTTTTGACAGC
AGTACACCTATCCAATTACATTCAATTCGTATGTTGACAAAATAAAAAAA
ATAAAAAAACATATAAATTTAAATCTTTGTATAAATACCCCCCTTGTATC
CTCAAAGAAGTATAGGAACATATGTTGAACACCGTCAATTTTCATAGATT
CACATACAAGCAGGTTGAAGAATCAGCTCCTATGCATCGAATGCACGAAG
ATTTTTTGCTTTCAAAAGCTTTAAGTGGAATCACCAAAATGATGGAATTT
TTATTAAACTTGTATTTCCCCTCTCTATATACTTCTTTCCCTACATCAAC
TCTCTCATTGAATGCATGTTTGTCTGTGAAACATGCATCCACTGTTACTG
ATTCAAACACGGACGCCCCAAATAGCAGAATCCTCTTCACCACATTTTTC
ATGAACACTTCTGATTTTTTCCACTGACTTGCAGATTCCACTGCAGCTCC
AATCAAATGATGCAACGCAAACATTACCAGCCTGAGCTTTCCACTCACAA
TCTGGAGGAGTCTGGCAACACATATTGCGGTCATCGATGTGCTCGACTTC
CAGACCAATAAACCATGAACCAAGTGACACATCTTCA
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