CN190045

Overview
NameCN190045
Unique NameCN190045
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN190045 vs. ExPASy Swiss-Prot
Match: AAPC_CENCI (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 3.387e-110
Identity = 148/186 (79.57%), Postives = 167/186 (89.78%), Query Frame = -2
Query:  159 QFASHGSLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTPGGDLMLISRVRNTSTDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQNKERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIRKDGLPDAVVWNPWDKKAKAMADLG 716
            QF +HG+LE HGFARNRFWSID DPP  P N + KA++DLILRP+EEDLKIWPHSFEFRLRVAL P GDL L SR+RNT+TDG+PFS+TFAYHTYF VSDISEVRVEGLET+DYLDNL+ KERFTEQGDAI FESEVDK+YL+ P+KIAI+DHEKK+TFV+ K+GLPDAVVWNPWDKKAKAM D G
Sbjct:   91 QFGTHGNLEQHGFARNRFWSIDNDPPPLPVNPAIKAFVDLILRPAEEDLKIWPHSFEFRLRVALGPSGDLSLTSRIRNTNTDGRPFSYTFAYHTYFFVSDISEVRVEGLETMDYLDNLKAKERFTEQGDAIVFESEVDKVYLAAPSKIAIIDHEKKKTFVVTKEGLPDAVVWNPWDKKAKAMQDFG 276          

HSP 2 Score: 97.8265 bits (242), Expect = 3.387e-110
Identity = 46/62 (74.19%), Postives = 52/62 (83.87%), Query Frame = -1
Query:    1 ESKSYG*FGDDEYKHMLCVEAAAVEKPITLKPGEEWKGRLELSGVPSSYCSGQLDPQKVSRG 186
            ++K+   FGD EYK+MLCVE AAVEKPITLKPGEEW+GR+ LS VPSSYCSGQLDP KV  G
Sbjct:  268 KAKAMQDFGDAEYKNMLCVEPAAVEKPITLKPGEEWRGRIALSAVPSSYCSGQLDPLKVLHG 329          
BLAST of CN190045 vs. ExPASy Swiss-Prot
Match: YMY9_YEAST (Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae GN=YMR099C PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.346e-18
Identity = 59/182 (32.42%), Postives = 85/182 (46.70%), Query Frame = -2
Query:  165 LESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRP---SEEDLKIWPHSFEFRLRVALTPGGDLMLIS-RVRNTSTDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQNKERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKK-RTFVIRKDGLPDAVVWNPWDKKAKAMAD 695
            L  HG ARN  W         P        +   L+P   + E  K+WP  +   L V L  G D +  +  V NTS+  K   F + +HTYF + DI    V  L  +   D L  KE + ++   +TF  E D IY +   + AI   +K  +   +++  LPD VVWNPW +K++ MAD
Sbjct:   79 LPQHGLARNSTWEFLGQTKENPPT------VQFGLKPEIANPELTKLWPMDYLLILTVEL--GSDYLKTAIEVENTSSS-KELKFNWLFHTYFRIEDIEGTMVSNLAGMKLYDQLL-KESYVDKHPVVTFNQETDVIYQNVSAERAIQIVDKGVQIHTLKRYNLPDTVVWNPWIEKSQGMAD 250          

HSP 2 Score: 28.4906 bits (62), Expect = 4.346e-18
Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = -1
Query:   79 YKHMLCVEAAAVEKPITLKPGEEW 150
            Y+ M+C+E   V   I+L PG++W
Sbjct:  257 YQQMICIEPGHVHDFISLAPGKKW 280          
The following BLAST results are available for this feature:
BLAST of CN190045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
AAPC_CENCI3.387e-11079.57Putative glucose-6-phosphate 1-epimerase OS=Cenchr... [more]
YMY9_YEAST4.346e-1832.42Glucose-6-phosphate 1-epimerase OS=Saccharomyces c... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0002N04_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002N04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN190045 ID=CN190045; Name=CN190045; organism=Citrus sinensis; type=EST; length=717bp
CCCCCGAGAGACTTTCTGTGGATCAAGTTGCCCACTACAATAACTAGACG
GAACACCAGAAAGTTCCAGCCTTCCTTTCCACTCCTCCCCAGGTTTCAAT
GTAATCGGTTTTTCAACAGCAGCTGCCTCCACGCACAACATATGCTTATA
CTCATCATCCCCAAATCAGCCATAGCTTTTGCTTTCTTATCCCATGGATT
CCACACCACAGCATCTGGAAGCCCATCTTTACGAATGACAAACGTTCTCT
TCTTTTCATGATCCAGAATTGCAATCTTTGTAGGAGTACTGAGGTATATC
TTGTCCACTTCTGATTCAAATGTTATTGCATCCCCTTGTTCAGTAAAACG
CTCCTTATTCTGCAAGTTGTCGAGGTAATCCAGTGTCTCCAATCCTTCAA
CACGAACTTCACTGATGTCTGAAACAGAGAAATAGGTATGATATGCAAAT
GTGAACGAAAATGGCTTTCCATCAGTGCTAGTATTCCTAACGCGAGAGAT
CAACATCAGATCACCACCAGGAGTCAAAGCTACCCTGAGACGGAACTCAA
AACTGTGAGGCCAGATCTTCAGATCTTCTTCCGAGGGCCTTAGTATCAAA
TCAATATAAGCCTTACTCGAGGAATTAGTTGGAAAAGCAGGCGGGTCAGT
GTCAATACTCCAAAACCGATTTCTAGCAAACCCATGCGACTCCAGAGAGC
CATGACTTGCAAACTGA
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