CN190044

Overview
NameCN190044
Unique NameCN190044
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN190044 vs. ExPASy Swiss-Prot
Match: THIK2_ARATH (3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 2.586e-60
Identity = 122/171 (71.35%), Postives = 134/171 (78.36%), Query Frame = 1
Query:   97 MEKAXXXXXXXXXXXXPSSSQTSDSPA-ISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 606
            MEKA            PSSS + +  A +SAS C AG++A Y R   + DDVVIVAA+RT +CK+KRG FKDT  DDLLAPVL+A+IEKT LNPSEVGDIVVGTVLAPGS RA ECRMAAFYAGFPETV +RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMT N
Sbjct:    1 MEKAIERQRVLLEHLRPSSSSSHNYEASLSASACLAGDSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTN 171          
BLAST of CN190044 vs. ExPASy Swiss-Prot
Match: THIK1_ARATH (3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=1 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 2.959e-56
Identity = 117/170 (68.82%), Postives = 130/170 (76.47%), Query Frame = 1
Query:   97 MEKAXXXXXXXXXXXXPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 606
            MEKA            PSSS  +   ++SAS C + ++A Y     + DDVVIVAA RTA+CKAKRG FKDT  D+LLA VL+A+IEKT +NPSEVGDIVVGTVL PGS RA ECRMAAFYAGFPETVP+RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMT N
Sbjct:    1 MEKATERQRILLRHLQPSSSSDA---SLSASACLSKDSAAYQ----YGDDVVIVAAQRTALCKAKRGSFKDTFPDELLASVLRALIEKTNVNPSEVGDIVVGTVLGPGSQRASECRMAAFYAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTN 163          
BLAST of CN190044 vs. ExPASy Swiss-Prot
Match: THIK5_ARATH (3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 1.985e-52
Identity = 103/153 (67.32%), Postives = 126/153 (82.35%), Query Frame = 1
Query:  148 SSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 606
            S+S     P++ + +    E +      AF DD+VIVAAYRTAICKA+RGGFKDTL DDLLA VLKAV+E+T L+PSEVGDIVVGTV+APGS RAMECR+AA++AGFP++VP+RTVNRQCSSGLQAVADVA +I+AG YDIGI AG+ESM+ +
Sbjct:   21 SNSSLKHEPSLLSPVNCVSEVSPM---AAFGDDIVIVAAYRTAICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPGSQRAMECRVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMSTD 170          
BLAST of CN190044 vs. ExPASy Swiss-Prot
Match: THIKB_RAT (3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 7.841e-33
Identity = 79/152 (51.97%), Postives = 102/152 (67.11%), Query Frame = 1
Query:  151 SSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 606
            + ++  S A+ A+ CSAG         A   DVV+V   RT I +A RGGFKDT  D+LL+ VL AV++  +L P  +GDI VG VL PG+  AM  R+A F +G PETVPL  VNRQCSSGLQAVA++A  I+ G YDIG+A G+ESMT++
Sbjct:   12 AGRSESSSALQAAPCSAGFPQ------ASASDVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLQPGAGAAM-ARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTLS 156          
BLAST of CN190044 vs. ExPASy Swiss-Prot
Match: THIKB_MOUSE (3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.747e-32
Identity = 78/152 (51.32%), Postives = 101/152 (66.45%), Query Frame = 1
Query:  151 SSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 606
            + +   S A+ A+ CSAG         A   DVV+V   RT I +A RG FKDT  D+LL+ VL AV++  +L P ++GDI VG VL PG+   M  R+A F +G PETVPL TVNRQCSSGLQAVA++A  I+ G YDIG+A G+ESMT++
Sbjct:   12 AGRPESSSALQAAPCSAGFLQ------ASASDVVVVHGRRTPIGRASRGCFKDTTPDELLSAVLTAVLQDVKLKPEQLGDISVGNVLQPGAGAIM-ARIAQFLSGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTLS 156          
BLAST of CN190044 vs. ExPASy Swiss-Prot
Match: THIKA_MOUSE (3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.281e-32
Identity = 79/153 (51.63%), Postives = 103/153 (67.32%), Query Frame = 1
Query:  151 SSQTSDSPAISASICSAGEAAGYHRKP-AFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 606
            + +   S A+ A+ CSA       R P A   DVV+V   RT I +A RGGFK+T  D+LL+ VL AV++  RL P ++GDI VG VL PG+   M  R+A F +G PETVPL TVNRQCSSGLQAVA++A  I+ G YDIG+A G+ESM+++
Sbjct:   12 AGRPESSSALQAAPCSA-------RFPQASASDVVVVHGRRTPIGRASRGGFKNTTPDELLSAVLTAVLQDVRLKPEQLGDISVGNVLEPGAGAVM-ARIAQFLSGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSLS 156          
BLAST of CN190044 vs. ExPASy Swiss-Prot
Match: THIK_HUMAN (3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 8.669e-32
Identity = 70/120 (58.33%), Postives = 88/120 (73.33%), Query Frame = 1
Query:  244 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 603
            DVV+V   RTAIC+A RGGFKDT  D+LL+ V+ AV++   L P ++GDI VG VL PG+   M  R+A F +  PETVPL TVNRQCSSGLQAVA +A  I+ G YDIG+A G+ESM++
Sbjct:   37 DVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIM-ARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSL 155          
BLAST of CN190044 vs. ExPASy Swiss-Prot
Match: THIKA_RAT (3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 9.584e-31
Identity = 76/152 (50.00%), Postives = 99/152 (65.13%), Query Frame = 1
Query:  151 SSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 606
            + +   S A+ A+ CSA          A   DVV+V   RT I +A RGGFKDT  D+LL+ VL AV++  +L P  +GDI VG VL PG+   M  R+A F +G PETVPL  VNRQCSSGLQAVA++A  I+ G YDIG+A G+ESM+++
Sbjct:   12 AGRPESSSALQAAPCSATFPQ------ASASDVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLEPGAGAVM-ARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSLS 156          
BLAST of CN190044 vs. ExPASy Swiss-Prot
Match: THIK_YARLI (3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica GN=POT1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 9.918e-28
Identity = 65/120 (54.17%), Postives = 85/120 (70.83%), Query Frame = 1
Query:  241 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 600
            DDVVI AAYRTA  K  +G FKDT + +LLA +L+ ++++++++P  +GD+V G VLA G+  A E R A   AG PETVP   +NRQCSSGL AV DVA  I+AG  DIGI  G+ESM+
Sbjct:   28 DDVVITAAYRTAHTKGGKGLFKDTSSSELLASLLEGLVKESKIDPKLIGDVVCGNVLAAGAG-ATEHRAACLVAGIPETVPFVALNRQCSSGLMAVNDVANKIRAGQIDIGIGCGVESMS 146          
BLAST of CN190044 vs. ExPASy Swiss-Prot
Match: THIKB_CANTR (3-ketoacyl-CoA thiolase B, peroxisomal OS=Candida tropicalis PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.133e-22
Identity = 59/124 (47.58%), Postives = 78/124 (62.90%), Query Frame = 1
Query:  241 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVL--APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 606
            DDVVIVAAYRTAI K  +G F++  ++ +L   LK  I+KT ++PS + D+ +G VL  A G+T   E R A   AG P T     VNR CSSGL A++D+A  IK G  + G+A G ESM+ N
Sbjct:   25 DDVVIVAAYRTAIGKGFKGSFRNVHSEFILTEFLKEFIKKTNIDPSLIEDVAIGNVLNQAAGAT---EHRGACLAAGIPYTAAFIAVNRFCSSGLMAISDIANKIKTGEIECGLAGGAESMSTN 145          
The following BLAST results are available for this feature:
BLAST of CN190044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
THIK2_ARATH2.586e-6071.353-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidop... [more]
THIK1_ARATH2.959e-5668.823-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidop... [more]
THIK5_ARATH1.985e-5267.323-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidop... [more]
THIKB_RAT7.841e-3351.973-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus n... [more]
THIKB_MOUSE1.747e-3251.323-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musc... [more]
THIKA_MOUSE2.281e-3251.633-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musc... [more]
THIK_HUMAN8.669e-3258.333-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapie... [more]
THIKA_RAT9.584e-3150.003-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus n... [more]
THIK_YARLI9.918e-2854.173-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia l... [more]
THIKB_CANTR8.133e-2247.583-ketoacyl-CoA thiolase B, peroxisomal OS=Candida ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002N03_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002N03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN190044 ID=CN190044; Name=CN190044; organism=Citrus sinensis; type=EST; length=607bp
GAGGGTAGATTCAAACCAGGAAAGAGTAAACAAGTCATCCCTGGTTCTCG
ATTCATCAGAACTCAAAAGCTTTCCATTGAAACCTGAGAGTGAGAGATGG
AGAAAGCTCTTCACAGACAGAGAATTCTGCTTCAACATCTTCAACCTTCT
TCTTCCCAAACCAGTGACTCGCCGGCTATTTCTGCTTCGATTTGTTCGGC
TGGTGAGGCTGCAGGGTACCATAGGAAGCCTGCTTTTGATGATGATGTCG
TCATTGTGGCTGCATACCGTACTGCAATTTGCAAGGCGAAACGTGGAGGC
TTCAAGGATACTCTTGCCGATGATCTGCTTGCACCTGTTCTAAAGGCAGT
GATAGAGAAAACGAGGTTGAATCCCAGTGAAGTAGGGGATATAGTTGTTG
GTACAGTCTTGGCACCTGGCTCAACAAGAGCCATGGAGTGTAGGATGGCA
GCGTTCTATGCTGGTTTCCCTGAAACGGTGCCCCTCAGAACTGTCAACAG
GCAGTGTTCATCTGGCTTGCAGGCGGTTGCTGATGTTGCAACAGCTATAA
AAGCTGGATTGTATGACATTGGTATTGCTGCTGGATTGGAAAGCATGACT
GTGAATT
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