CN190008

Overview
NameCN190008
Unique NameCN190008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN190008 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 423.705 bits (1088), Expect = 4.816e-118
Identity = 209/239 (87.45%), Postives = 219/239 (91.63%), Query Frame = 1
Query:   16 VKRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISFAD-----GKREIRGDPAYVRAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQA 717
            V RIKLGSQGLEVSAQGLGCMGMSAFYGPPKPE DMI LIHHAINSGITLLDTSD+YGPHTNEILLGKALKGG RERV LATKFGI   D     GKR + GDPAYVRAACEASLKRLDIDCIDLYYQHR+DTRVPIE+T+GELKKLVEEGK+KYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVE EI+PTCRELGIGIVAYSPLGRGF SSGPKL+E  S ED+R+YLPRFQA
Sbjct:    8 VPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYGPHTNEILLGKALKGGTRERVVLATKFGIVLGDEKKAEGKRAVHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLLEDMSNEDYRKYLPRFQA 246          
BLAST of CN190008 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1)

HSP 1 Score: 420.239 bits (1079), Expect = 5.325e-117
Identity = 200/234 (85.47%), Postives = 221/234 (94.44%), Query Frame = 1
Query:   13 AVKRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISFADGKREIRGDPAYVRAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQ 714
            +V RIKLGSQGLEVSAQGLGCMGMSAFYGPPKPES+MI LIHHA+++G+T LDTSD+YGPHTNE+LLGKAL+GG+RE+VELATKFG+SFADGKREI GDPAYVR ACE S KRL +DCIDLYYQHRID RVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRD E +I+PTCRELGIGIVAYSPLGRGFFSSG KLV+S S++DFR+++PRFQ
Sbjct:    7 SVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESEMIKLIHHAVDAGVTFLDTSDVYGPHTNEVLLGKALQGGVREKVELATKFGVSFADGKREIHGDPAYVRTACEGSFKRLGVDCIDLYYQHRIDKRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEEDIIPTCRELGIGIVAYSPLGRGFFSSGAKLVDSLSEQDFRKHMPRFQ 240          
BLAST of CN190008 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.614e-50
Identity = 109/227 (48.02%), Postives = 145/227 (63.88%), Query Frame = 1
Query:   52 VSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKG-GMRERVELATKFGISF--ADGKREIRGDPAYVRAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAE---IVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQ 714
            V A G GCMG+ A YGP   E++  A++ HA + G T  D+SD+YG   NE  +G+  K  G R+ + LATKFG       G+  +  +P Y+  A + SLKRL IDCIDLYY HR     PIE  +G LKK VE GKI+YIGLSE SA+TIRRA AV+P++AVQ+E+S +S ++E     ++  CRE  I IV Y+PLGRGF +   K  + F + DFR+  PR+Q
Sbjct:   13 VPAIGFGCMGLHAMYGPSSEEANQ-AVLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEYSPFSLEIERPEIGVMKACRENNITIVCYAPLGRGFLTGAYKSPDDFPEGDFRRKAPRYQ 238          
BLAST of CN190008 vs. ExPASy Swiss-Prot
Match: PLR1_SCHPO (Pyridoxal reductase OS=Schizosaccharomyces pombe GN=plr1 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.039e-28
Identity = 89/236 (37.71%), Postives = 130/236 (55.08%), Query Frame = 1
Query:   43 GLEVSAQGLGCMGMSAFYGPPK--PESDMIALIHHAINSGITLLDTSDIYG---PHTNEILLGKALKGGMRE--RVELATKFGISFADGKREIRGDPAYVRAACEASLKRL-DIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAE-IVPTCRELGIGIVAYSPLGRGFFSSGPKLVE---SFSKE-DFRQYLPRF 711
            G +V   G G MG++     PK  P+ +   ++++A++ G    D  + YG   P +N  LL +  +       +V L+ K G+ F     +  G+P +V  + E  +  L     +DL+   R+D  VPIE T+  LK  V+ GKI  +GLSE SA TI+RAHAV PI AV++E+SL+SRD+E   I+  CR+L I I+AYSP  RG  +   K VE    F+K   F +YL RF
Sbjct:    6 GFKVGPIGFGLMGLT---WKPKQTPDEEAFEVMNYALSQGSNYWDAGEFYGVDPPTSNLDLLARYFEKYPENANKVFLSVKGGLDFKTLVPD--GNPDFVSKSVENVIAHLRGTKKLDLFQCARVDPNVPIETTMKTLKGFVDSGKISCVGLSEVSAETIKRAHAVVPIAAVEVEYSLFSRDIETNGIMDICRKLSIPIIAYSPFCRGLLTGRIKTVEDLKEFAKSFPFLEYLDRF 236          
BLAST of CN190008 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.915e-27
Identity = 71/196 (36.22%), Postives = 107/196 (54.59%), Query Frame = 1
Query:  130 LIHHAINSGITLLDTSDIYGPHTNEILLGKALKG-GMRERVELATKFGISFADGKREIRGDPAYVRAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQ 714
            L+  A++ G+  +DT+ IYG   +E L+G+ ++  G+R  + +ATK      DG  E+     ++R+  E SLKRL  D IDLYY H  D + P+    G LK+L +EGKIK IG S      ++  +A   +   Q E+SL  RD E E++P C + GI  + Y PL  G  +   K  +    +DFR+  P+FQ
Sbjct:   41 LVRTALDGGVNFIDTAFIYGLGRSEELIGEVVQERGVRNELIIATKGAHKEVDGSIELDNSREFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGISFIPYFPLASGLLTG--KFTQDTVFDDFRKDKPQFQ 234          
BLAST of CN190008 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27
Identity = 77/229 (33.62%), Postives = 119/229 (51.97%), Query Frame = 1
Query:   31 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKG-GMRERVELATKFGISFADGKREIRGDPAYVRAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQ 714
            +   G+E S  GLG   +         E   I  I  A++ GITL+DT+  YG   +E ++GKA+K  G R++V LATK  + + + +     + A +    E SLKRL  D IDLY  H  D  VPIE T   +K+L + GKI+ IG+S  S   +    AV P+  +Q  ++L+ R++E  ++P  ++  I  + Y  L RG  +       +F  +D R + P+FQ
Sbjct:    6 IADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYGKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEEYTFEGDDLRNHDPKFQ 234          
BLAST of CN190008 vs. ExPASy Swiss-Prot
Match: YQKF_BACSU (Uncharacterized oxidoreductase yqkF OS=Bacillus subtilis GN=yqkF PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.011e-23
Identity = 74/232 (31.90%), Postives = 120/232 (51.72%), Query Frame = 1
Query:   16 VKRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISFADGKREIRGDP--AYVRAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGP--KLVESFSKEDFRQY 699
            +++ KLG+  L++S  GLGCM +         ++  ++++  AI  GI  LDT+D+Y    NE ++G A++   R  + LATK G  + DG      DP  AY++ A + SL RL  D IDLY  H       I+ TI   ++L +EG I+Y G+S    + I+       I ++ +++SL+ R  E E +P   E  I +VA  P+ +G  +  P  +  ES  +  +  Y
Sbjct:    1 MRKRKLGTSDLDISEVGLGCMSLGT------EKNKALSILDEAIELGINYLDTADLYDRGRNEEIVGDAIQN-RRHDIILATKAGNRWDDGSEGWYWDPSKAYIKEAVKKSLTRLKTDYIDLYQLHGGTIEDNIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYVKKSNIVSIMMQFSLFDRRPE-EWLPLLEEHQISVVARGPVAKGLLTEKPLDQASESMKQNGYLSY 224          
BLAST of CN190008 vs. ExPASy Swiss-Prot
Match: PLR2_SCHPO (Probable pyridoxal reductase 2 OS=Schizosaccharomyces pombe GN=SPCC1281.04 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.011e-23
Identity = 81/229 (35.37%), Postives = 123/229 (53.71%), Query Frame = 1
Query:   43 GLEVSAQGLGCMGMSAFYGPPK-PESDMIALIHHAINSGITLLDTSDIYG---PHTNEILLGKALKGGMR--ERVELATKFGISFADGKREIRGDPAYVRAACEASLKRL-DIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAE-IVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLP 705
            G +V   GLG MG++  + P + P      L+++A++ G    +  + YG   P  N  LL    +   +  ++V L+ K G  F        GDP  V  + + +L RL     +DL+   R+D +VPIE T+  LK  V+ G+I  +GLSEASA +I+RA A+ PI AV+ E+SL+SRD+E   I+ TC +L I I+AY+P   G  +   K  E    +DF +  P
Sbjct:    6 GFKVGPIGLGLMGLT--WRPKQTPIKQAFELMNYALSQGSNYWNAGEFYGINPPTANLDLLADYFEKYPKNADKVFLSVKGGTDFKT--LAPHGDPESVTKSVKNALTRLRGKKKLDLFQCARVDHKVPIETTMKALKAFVDSGEISCVGLSEASAESIKRALAIVPIAAVETEYSLFSRDIEKNGILDTCTQLSIPIIAYAPFCHGLLTGRVKTAEDL--KDFIKAFP 228          
BLAST of CN190008 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.850e-23
Identity = 73/235 (31.06%), Postives = 116/235 (49.36%), Query Frame = 1
Query:   16 VKRIKLGSQGLEVSAQGLG--CMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISFADGKREIRGDPAYVRAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQ 714
            +K+ KLG   L+V   GLG   +G    Y P   E     L+  AI +G+T+LDT+ IYG   +E L+G+ L+   RE V +ATK               P +++ + + SLKRL+ D IDL+Y H  D   P +  +  L ++ + GKI+ IG+S  S   ++ A+    +  +Q E++L +R+ E    P  +E  I  + Y PL  G  +       +F + D R     F+
Sbjct:    1 MKKAKLGKSDLQVFPIGLGTNAVGGHNLY-PNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFK 234          
BLAST of CN190008 vs. ExPASy Swiss-Prot
Match: YRPG_BACSU (Uncharacterized oxidoreductase yrpG OS=Bacillus subtilis GN=yrpG PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.640e-23
Identity = 82/230 (35.65%), Postives = 115/230 (50.00%), Query Frame = 1
Query:   31 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTN----EILLGK--ALKGGMRERVELATKFGISFAD---GKREIRGDPAY-VRAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHA------VHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVES 672
            LG  GL VS   LG M     +G    E     ++  A+++GI   DT++IYG   N    E ++GK  A  G  RE+V LATK     +D   G  ++RG   Y +R   E SLKRL  D I+LY  H ID R P +      +  V  GK+ YIG S  +   + +A A         +   Q ++SL  R  E E++P  R+LG+G+VA+SPL  G    G K ++S
Sbjct:    6 LGRTGLRVSRLCLGTMN----FGVDTDEKTAFRIMDEALDNGIQFFDTANIYGWGKNAGLTESIIGKWFAQGGQRREKVVLATKVYEPISDPNDGPNDMRGLSLYKIRRHLEGSLKRLQTDHIELYQMHHIDRRTPWDEIWEAFETQVRSGKVDYIGSSNFAGWHLVKAQAEAEKRRFMGLVTEQHKYSLLERTAEMEVLPAARDLGLGVVAWSPLAGGLL--GGKALKS 229          
The following BLAST results are available for this feature:
BLAST of CN190008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
A115_TOBAC4.816e-11887.45Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
IN22_MAIZE5.325e-11785.47IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1[more]
YAKC_SCHPO5.614e-5048.02Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
PLR1_SCHPO6.039e-2837.71Pyridoxal reductase OS=Schizosaccharomyces pombe G... [more]
YCCK_BACSU3.915e-2736.22Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
GS69_BACSU5.113e-2733.62General stress protein 69 OS=Bacillus subtilis GN=... [more]
YQKF_BACSU2.011e-2331.90Uncharacterized oxidoreductase yqkF OS=Bacillus su... [more]
PLR2_SCHPO2.011e-2335.37Probable pyridoxal reductase 2 OS=Schizosaccharomy... [more]
IOLS_BACSU5.850e-2331.06Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=... [more]
YRPG_BACSU7.640e-2335.65Uncharacterized oxidoreductase yrpG OS=Bacillus su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002M07_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002M07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN190008 ID=CN190008; Name=CN190008; organism=Citrus sinensis; type=EST; length=717bp
AAAATGGCGGGGGCAGTGAAGAGAATCAAGCTTGGTTCACAAGGTCTAGA
GGTTTCAGCACAAGGCTTAGGATGCATGGGCATGTCCGCCTTCTACGGGC
CCCCGAAGCCCGAGTCCGACATGATCGCCTTGATCCACCATGCCATTAAC
AGTGGCATCACTCTACTTGACACCTCCGATATTTACGGGCCCCACACCAA
TGAAATCCTTCTGGGAAAGGCTTTGAAGGGAGGAATGAGGGAAAGAGTTG
AATTGGCTACTAAATTTGGTATCAGCTTTGCGGATGGTAAAAGGGAAATT
CGCGGTGACCCGGCTTATGTGAGAGCTGCATGTGAGGCCAGCTTGAAGCG
TCTGGATATTGATTGTATTGATCTTTATTACCAACATCGCATTGATACAC
GAGTTCCCATTGAAGTCACGATTGGAGAACTCAAGAAACTAGTTGAAGAG
GGTAAGATAAAGTATATAGGTCTGTCCGAGGCTTCTGCCTCAACAATTAG
ACGAGCTCACGCTGTCCATCCAATAACAGCTGTGCAGTTGGAATGGTCCT
TGTGGTCACGAGATGTGGAGGCAGAGATTGTTCCTACTTGCAGGGAACTT
GGCATTGGAATTGTTGCATACAGTCCTCTAGGACGAGGATTTTTTTCCTC
AGGGCCTAAGTTGGTTGAAAGCTTTTCAAAGGAAGATTTTAGACAGTATC
TACCGAGGTTCCAAGCT
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