CN190006

Overview
NameCN190006
Unique NameCN190006
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN190006 vs. ExPASy Swiss-Prot
Match: EKI_NEMVE (Probable ethanolamine kinase OS=Nematostella vectensis GN=etnk PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.818e-23
Identity = 51/125 (40.80%), Postives = 76/125 (60.80%), Query Frame = -2
Query:  292 DYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSSTGD-------QPSDAEVKQLLQDVEKYTLASHLSWGLWGIISEHVNEIDFDYIGYAKQRFDQYWLTKPELL 645
            D+EYA+ NP+AYDIANHFCE A          +DYS YP  + + +FL +YL    +        PS  E+++L   V ++ LA+H  WG+WG++  H +EIDFD++ YA  R ++Y+L K + L
Sbjct:  226 DFEYANPNPIAYDIANHFCEYAGVDE------VDYSLYPQKDHQVKFLESYLKRAMELQGEKDVNPSSREIEKLYVHVNQFALAAHFFWGVWGLVQAHYSEIDFDFLEYAITRLNEYYLRKEKFL 344          
BLAST of CN190006 vs. ExPASy Swiss-Prot
Match: EKI1_HUMAN (Ethanolamine kinase 1 OS=Homo sapiens GN=ETNK1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.418e-21
Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = -2
Query:  295 NEIK*RYNFQDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSST------GDQPSDAEVKQLLQDVEKYTLASHLSWGLWGIISEHVNEIDFDYIGYAKQRFDQYWLTKPEL 675
            NE +    F DYEY+ YN +AYDI NHF E A          +DYS YPD E + ++L AYL +       G + ++ EV+ L   V ++ LASH  WGLW +I    + I+FD++GYA  RF+QY+  KPE+
Sbjct:  319 NEKQGDVQFIDYEYSGYNYLAYDIGNHFNEFAGVSD------VDYSLYPDRELQSQWLRAYLEAYKEFKGFGTEVTEKEVEILFIQVNQFALASHFFWGLWALIQAKYSTIEFDFLGYAIVRFNQYFKMKPEV 445          
BLAST of CN190006 vs. ExPASy Swiss-Prot
Match: EKI1_MOUSE (Ethanolamine kinase 1 (Fragment) OS=Mus musculus GN=Etnk1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.200e-20
Identity = 54/133 (40.60%), Postives = 76/133 (57.14%), Query Frame = -2
Query:  295 NEIK*RYNFQDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSST------GDQPSDAEVKQLLQDVEKYTLASHLSWGLWGIISEHVNEIDFDYIGYAKQRFDQYWLTKPEL 675
            NE +    F DYEY+ YN +AYDI NHF E A          +DYS YPD E + + + +YL +       G   ++ EV+ L   V ++ LASH  WGLW +I    + I+FD++GYA  RF+QY+  KPE+
Sbjct:  279 NEKQGDVQFIDYEYSGYNYLAYDIGNHFNEFAGVSD------VDYSLYPDRELQGQCVRSYLEAYKEYKGFGSDVTEKEVETLFIQVNQFALASHFFWGLWALIQAKYSTIEFDFLGYAVVRFNQYFKMKPEV 405          
BLAST of CN190006 vs. ExPASy Swiss-Prot
Match: EAS_DROME (Ethanolamine kinase OS=Drosophila melanogaster GN=eas PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.043e-19
Identity = 51/131 (38.93%), Postives = 73/131 (55.73%), Query Frame = -2
Query:  268 NFQDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSSTGDQPS--DAEVKQLLQDVEKYTLASHLSWGLWGIISEHVNEIDFDYIGYAKQRFDQYWLTKPELLGSSGATTN 654
            NF DYEYA YN  A+DI NHF EM           +DYS+YP  E + ++L  YL     + +  + EV+ L   V ++ LASH+ W +W ++    + IDFDY+GYA  R+++Y   K E L  + A  N
Sbjct:  393 NFIDYEYADYNFQAFDIGNHFAEMCGVDE------VDYSRYPKREFQLQWLRVYLEEYLQRSNIQNDEVELLYVQVNQFALASHIFWTVWSLLQAEHSTIDFDYVGYAFLRYNEYLARKVEFLSLTAAKNN 517          
BLAST of CN190006 vs. ExPASy Swiss-Prot
Match: CHKA_RAT (Choline kinase alpha OS=Rattus norvegicus GN=Chka PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.503e-18
Identity = 49/141 (34.75%), Postives = 76/141 (53.90%), Query Frame = -2
Query:  295 MDFQLNEIK*RYNFQDYEYASYNPVAYDIANHFCEMAADYHTETPHLM--DYSKYPDLEERHRFLHAYLS-------STGDQPSDAEVKQLLQDVEKYTLASHLSWGLWGIISEHVNEIDFDYIGYAKQRFDQYWLTKPEL 690
            ++ Q N  K +    D+EY+SYN   +DI NHFCE   DY  E       +  KYP  +++  F+ +YL+       S   +   A  + +L +V ++ LASH  WGLW I+   ++ I+F Y+ YA+ RFD Y+  K +L
Sbjct:  311 LEGQENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYTYEKYPFFRANIQKYPTRKQQLHFISSYLTTFQNDFESLSSEEQSATKEDMLLEVNRFALASHFLWGLWSIVQAKISSIEFGYMEYAQARFDAYFDQKRKL 451          
BLAST of CN190006 vs. ExPASy Swiss-Prot
Match: CHKB_HUMAN (Choline/ethanolamine kinase OS=Homo sapiens GN=CHKB PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 4.269e-18
Identity = 50/125 (40.00%), Postives = 72/125 (57.60%), Query Frame = -2
Query:  295 DYEYASYNPVAYDIANHFCEMAADY-HTETP-HLMDYSKYPDLEERHRFLHAYLSST--GDQPSDAEVKQLLQD----VEKYTLASHLSWGLWGIISEHVNEIDFDYIGYAKQRFDQYWLTKPEL 645
            D+EY+SYN   +DI NHFCE   DY H E P +    + YP  E++  F+  YL+    G+  S  E ++L +D    V +Y LASH  WGLW I+   ++ I+F Y+ YA+ RF  Y+  K +L
Sbjct:  264 DFEYSSYNYRGFDIGNHFCEWVYDYTHEEWPFYKARPTDYPTQEQQLHFIRHYLAEAKKGETLSQEEQRKLEEDLLVEVSRYALASHFFWGLWSILQASMSTIEFGYLDYAQSRFQFYFQQKGQL 388          
BLAST of CN190006 vs. ExPASy Swiss-Prot
Match: EKIB_DICDI (Probable ethanolamine kinase B OS=Dictyostelium discoideum GN=etnkB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.242e-17
Identity = 56/163 (34.36%), Postives = 74/163 (45.40%), Query Frame = -2
Query:  292 NEIK*RYNFQDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSSTGD-----------------------------------QPSDAEVKQLLQDVEKYTLASHLSWGLWGIISEHVNEIDFDYIGYAKQRFDQYWLTKPELL 675
            N+ K +  F D+EY+ YN   YDI N FCE +          +DY+KYP +E + RF+  YL S  +                                   +PS  E+  L  +    TL SHL WG WGII    + IDFDYI YA +RF QY L K ++L
Sbjct:  289 NKEKGQVKFIDFEYSGYNFRGYDIGNFFCEFSG-------LDLDYTKYPSIEIQKRFIKNYLISINNCKNIQQKQKQKQQQQQIQNSINDENMDIENDELLYEPSKEEIHNLYIESNHLTLGSHLMWGFWGIIQHFSSSIDFDYIDYAIKRFKQYDLVKNKVL 444          
BLAST of CN190006 vs. ExPASy Swiss-Prot
Match: CHKB_MOUSE (Choline/ethanolamine kinase OS=Mus musculus GN=Chkb PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 2.119e-17
Identity = 49/128 (38.28%), Postives = 74/128 (57.81%), Query Frame = -2
Query:  286 DYEYASYNPVAYDIANHFCEMAADY-HTETP-HLMDYSKYPDLEERHRFLHAYLSST--GDQPSDAEVK----QLLQDVEKYTLASHLSWGLWGIISEHVNEIDFDYIGYAKQRFDQYWLTKPELLGS 645
            D+EY+SYN   +DI NHFCE   DY + E P +    + YP  E++  F+  YL+    G+  S+ E K    +LL ++ +Y+LASH  WGLW  +   ++ I+F Y+ YA+ RF  Y+  K +L  S
Sbjct:  264 DFEYSSYNYRGFDIGNHFCEWVYDYTYEEWPFYKARPTDYPTREQQLHFIRHYLAEVQKGEILSEEEQKKREEELLLEISRYSLASHFFWGLWSTLQASMSTIEFGYLEYAQSRFQFYFQQKGQLTSS 391          
BLAST of CN190006 vs. ExPASy Swiss-Prot
Match: CHKA_MOUSE (Choline kinase alpha OS=Mus musculus GN=Chka PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.767e-17
Identity = 45/126 (35.71%), Postives = 70/126 (55.56%), Query Frame = -2
Query:  295 DYEYASYNPVAYDIANHFCEMAADYHTETPHLM--DYSKYPDLEERHRFLHAYLS-------STGDQPSDAEVKQLLQDVEKYTLASHLSWGLWGIISEHVNEIDFDYIGYAKQRFDQYWLTKPEL 645
            D+EY+SYN   +DI NHFCE   DY  E       +  KYP  +++  F+ +YL+       S   +   A  + +L +V ++ LASH  WGLW I+   ++ I+F Y+ YA+ RF+ Y+  K +L
Sbjct:  326 DFEYSSYNYRGFDIGNHFCEWMYDYTYEKYPFFRANIQKYPSRKQQLHFISSYLTTFQNDFESLSSEEQFATKEDMLLEVNRFALASHFLWGLWSIVQAKISSIEFGYMEYAQARFEAYFDQKRKL 451          
BLAST of CN190006 vs. ExPASy Swiss-Prot
Match: EKIA_DICDI (Probable ethanolamine kinase A OS=Dictyostelium discoideum GN=etnkA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.614e-17
Identity = 47/122 (38.52%), Postives = 71/122 (58.20%), Query Frame = -2
Query:  292 NFQDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSST-GDQPSDAEVKQLLQDVEKYTLASHLSWGLWGIISEHVNEIDFDYIGYAKQRFDQYWLTKPELL 654
            +F D+EYA+YN    ++ NHF E A           DYS YP+ E +  FL  Y  S    +P+  E+++L  +  +++LASHL WG W I+    ++IDFDY+ Y K RFD+Y+ T+ + L
Sbjct:  232 SFIDFEYANYNFRGLELGNHFNEYAG-------FGPDYSLYPNKESQIHFLTDYHRSLFKTEPTQDELEKLYIESNQFSLASHLYWGFWAIVQAMNSQIDFDYLEYGKARFDRYYETRDQFL 346          
The following BLAST results are available for this feature:
BLAST of CN190006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
EKI_NEMVE9.818e-2340.80Probable ethanolamine kinase OS=Nematostella vecte... [more]
EKI1_HUMAN1.418e-2142.11Ethanolamine kinase 1 OS=Homo sapiens GN=ETNK1 PE=... [more]
EKI1_MOUSE1.200e-2040.60Ethanolamine kinase 1 (Fragment) OS=Mus musculus G... [more]
EAS_DROME5.043e-1938.93Ethanolamine kinase OS=Drosophila melanogaster GN=... [more]
CHKA_RAT2.503e-1834.75Choline kinase alpha OS=Rattus norvegicus GN=Chka ... [more]
CHKB_HUMAN4.269e-1840.00Choline/ethanolamine kinase OS=Homo sapiens GN=CHK... [more]
EKIB_DICDI1.242e-1734.36Probable ethanolamine kinase B OS=Dictyostelium di... [more]
CHKB_MOUSE2.119e-1738.28Choline/ethanolamine kinase OS=Mus musculus GN=Chk... [more]
CHKA_MOUSE2.767e-1735.71Choline kinase alpha OS=Mus musculus GN=Chka PE=1 ... [more]
EKIA_DICDI3.614e-1738.52Probable ethanolamine kinase A OS=Dictyostelium di... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0002M05_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002M05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN190006 ID=CN190006; Name=CN190006; organism=Citrus sinensis; type=EST; length=712bp
GAGGTTTATTTTAAACGGTAAACCTTCTTCTGCATAAAAGACAAAGCAAG
AACAAACACCAAATGATAAATGGTTCAAGGTAAAAAATGACTTAATCTGC
AACATTACCTAGCAAAATGCTCTATCAACTAAAATTTTAACAATATATTC
TGCAAGGCTGCAGCAGAATGAAAGAAACAGGGTCAAGTATAAACTATATT
TACACAATGTAGCAAGGAGGAGAAAACAATCCATGTTCTAGATATTATAG
TTACCATCAGGCAAAGCATTAGTGGTGGCTCCAGAAGATCCCAACAATTC
AGGCTTCGTTAACCAGTATTGGTCAAATCTTTGCTTCGCATATCCAATGT
AGTCAAAGTCAATTTCATTCACATGTTCTGAAATTATTCCCCATAAGCCC
CAGCTCAGATGGCTTGCAAGTGTATACTTCTCAACATCCTGAAGTAGTTG
CTTTACTTCCGCATCACTAGGTTGATCACCAGTGGAACTCAGATAAGCAT
GCAGAAATCGATGACGCTCCTCCAAATCAGGATATTTACTGTAGTCCATC
AGATGTGGTGTTTCTGTATGATAGTCGGCAGCCATCTCACAGAAGTGATT
TGCAATATCATATGCTACAGGATTGTAACTTGCATACTCATAGTCCTGAA
AATTGTATCTTCACTTGATCTCATTCAACTGAAAATCCATACTACCCTAG
TCACTCCATCAA
back to top