CN190005

Overview
NameCN190005
Unique NameCN190005
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN190005 vs. ExPASy Swiss-Prot
Match: CHKB_HUMAN (Choline/ethanolamine kinase OS=Homo sapiens GN=CHKB PE=1 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.644e-14
Identity = 43/134 (32.09%), Postives = 75/134 (55.97%), Query Frame = 1
Query:   40 FEFMSKPVQGPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVR-LWDRSRNWLIATKNLSPP--EEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEETKS 432
            F  +++   GP+L G F  GR+E++I +R L   ++R+P +SA IA K+ +FH ++MP  K    L+     +L   ++L P    E     + ++++E+  L K L      + FCHND+Q GNI++  E ++
Sbjct:  123 FAILAERSLGPQLYGVFPEGRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPEN 256          
BLAST of CN190005 vs. ExPASy Swiss-Prot
Match: CHKB_MOUSE (Choline/ethanolamine kinase OS=Mus musculus GN=Chkb PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 4.050e-13
Identity = 41/134 (30.60%), Postives = 74/134 (55.22%), Query Frame = 1
Query:   40 FEFMSKPVQGPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVR-LWDRSRNWLIATKNLSPPE--EARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEETKS 432
            F  +++   GP+L G F  GR+E+++ +R L   ++RDP +S  IA ++  FH ++MP  K  R L+     +L   ++L      +     + ++++E+++L K L      + FCHND+Q GNI++  E  S
Sbjct:  123 FAILAERSLGPQLYGVFPEGRLEQYLPSRPLKTQELRDPVLSGAIATRMARFHGMEMPFTKEPRWLFGTMERYLKQIQDLPSTSLPQMNLVEMYSLKDEMNSLRKLLDDTPSPVVFCHNDIQEGNILLLSEPDS 256          
BLAST of CN190005 vs. ExPASy Swiss-Prot
Match: CHKB_RAT (Choline/ethanolamine kinase OS=Rattus norvegicus GN=Chkb PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.539e-12
Identity = 41/134 (30.60%), Postives = 72/134 (53.73%), Query Frame = 1
Query:   40 FEFMSKPVQGPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVR-LWDRSRNWLIATKNLSPPE--EARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEETKS 432
            F  +++   GP+L G F  GR+E+++ +R L   ++RDP +S  IA K+  FH ++MP  K  R L+     +L   ++L      +     + ++++E++ L   L      + FCHND+Q GNI++  E  S
Sbjct:  123 FAILAERSLGPQLYGVFPEGRLEQYLPSRPLKTQELRDPVLSGAIATKMARFHGMEMPFTKEPRWLFGTMERYLKQIQDLPSTSLPQMNLVEMYSLKDEMNHLRTLLDATPSPVVFCHNDIQEGNILLLSEPDS 256          
BLAST of CN190005 vs. ExPASy Swiss-Prot
Match: CHKA_MOUSE (Choline kinase alpha OS=Mus musculus GN=Chka PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.625e-12
Identity = 47/133 (35.34%), Postives = 67/133 (50.38%), Query Frame = 1
Query:   40 FEFMSKPVQGPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVR-LWDRSRNWLIATKNLSPPEEARAFRLDAIEE-----EISTLEKALYRNDQHIGFCHNDLQYGNIMIDE 420
            F  +++   GP+L G F  GR+E+FI +R L   ++R P+ISA IA K+  FH + MP  K  + L+     +L     L    EAR  +L  I       E+  L   L      + FCHND Q GNI++ E
Sbjct:  180 FAILAERSLGPKLYGIFPQGRLEQFIPSRRLDTEELRLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLNQVLRLKFSREARVQQLHKILSYNLPLELENLRSLLQYTRSPVVFCHNDCQEGNILLLE 312          
BLAST of CN190005 vs. ExPASy Swiss-Prot
Match: KICB1_CAEEL (Choline kinase B1 OS=Caenorhabditis elegans GN=ckb-1 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.848e-12
Identity = 49/150 (32.67%), Postives = 73/150 (48.67%), Query Frame = 1
Query:   40 FEFMSKPVQGPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWL------------IATKNLSPPEEARAFRLDAIEEEISTLEKALYRN---DQHIGFCHNDLQYGNIMIDEETKSITLI 444
            F   S+   GP+L G F  GR+EEF+ +RTL +  I DPEIS  + A   ++H +D+P  K  R +   R  L            I    ++  E  +   +D + +EI  +EK  + N   +  + FCHNDL   NI+    TK + LI
Sbjct:   86 FAIFSERGLGPKLYGFFDGGRMEEFLPSRTLDSDCILDPEISRRVGAVYPKYHAIDVPVSKKRRCFQVMRESLKEYQDLGGGDYEIKPTTVTYSEHPKKISMDDLYKEIDFMEK--WTNELFEDTVVFCHNDLASSNILELNSTKELVLI 233          
BLAST of CN190005 vs. ExPASy Swiss-Prot
Match: EKI2_HUMAN (Ethanolamine kinase 2 OS=Homo sapiens GN=ETNK2 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 9.974e-12
Identity = 41/137 (29.93%), Postives = 71/137 (51.82%), Query Frame = 1
Query:   16 DRNDEIRTFEFMSKPVQGPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQ--KIVRLWDRSRNWLIATKN-LSPPEEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMID 417
            DR +E+R F+ +      P+L   F NG   E++    L    IR+P +  LIA ++ + H +   G   K + LW +  N+    KN ++P   A   +++ +E E++ L++ L + +  + FCHNDL   NI+ D
Sbjct:  123 DRENEVRNFQLLRAHSCAPKLYCTFQNGLCYEYMQGVALEPEHIREPRLFRLIALEMAKIHTIHANGSLPKPI-LWHKMHNYFTLVKNEINPSLSADVPKVEVLERELAWLKEHLSQLESPVVFCHNDLLCKNIIYD 258          
BLAST of CN190005 vs. ExPASy Swiss-Prot
Match: CHKA_HUMAN (Choline kinase alpha OS=Homo sapiens GN=CHKA PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.701e-11
Identity = 44/133 (33.08%), Postives = 67/133 (50.38%), Query Frame = 1
Query:   40 FEFMSKPVQGPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVR-LWDRSRNWLIATKNLSPPEEARAFRLDAIEE-----EISTLEKALYRNDQHIGFCHNDLQYGNIMIDE 420
            F  +++   GP+L G F  GR+E+FI +R L   ++  P+ISA IA K+  FH + MP  K  + L+     +L     +   EE+R  +L  +       E+  L   L      + FCHND Q GNI++ E
Sbjct:  184 FAILAERSLGPKLYGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLE 316          
BLAST of CN190005 vs. ExPASy Swiss-Prot
Match: EKIA_DICDI (Probable ethanolamine kinase A OS=Dictyostelium discoideum GN=etnkA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 42/147 (28.57%), Postives = 68/147 (46.26%), Query Frame = 1
Query:   16 DRNDEIRTFEFMSKPVQGPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEA----RAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEETKSITLI 444
            DR +E+       +   G +  G F NG +  FI    L+  DI  P +   IA ++ ++H ++MP +K   LW   + W     ++ P  E     ++  +  + EE   LE+ L + +  I FCHNDL  GNI+ D      + I
Sbjct:   88 DRKNELIIQTEADQNGLGAKFYGLFDNGCIYGFIKGEPLAYEDISKPTMQTCIAKEIAQWHSIEMPTRKNPSLWPTIKKWAALAPDVYPVPEKNEYYQSINVKKMIEEGKMLEQRLAQLNSPIVFCHNDLLSGNIIYDPSQNCASFI 234          
BLAST of CN190005 vs. ExPASy Swiss-Prot
Match: CHKA_RAT (Choline kinase alpha OS=Rattus norvegicus GN=Chka PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.950e-11
Identity = 45/133 (33.83%), Postives = 66/133 (49.62%), Query Frame = 1
Query:   40 FEFMSKPVQGPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVR-LWDRSRNWLIATKNLSPPEEARAFRLDA-----IEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDE 420
            F  +++   GP+L G F  GR+E+FI +R L   ++  P+ISA IA K+  FH + MP  K  + L+     +L     L    EAR  +L       +  E+  L   L      + FCHND Q GNI++ E
Sbjct:  180 FAILAERSLGPKLYGIFPQGRLEQFIPSRRLDTEELCLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLNQVLRLKFSREARVQQLHKFLSYNLPLELENLRSLLQYTRSPVVFCHNDCQEGNILLLE 312          
The following BLAST results are available for this feature:
BLAST of CN190005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
CHKB_HUMAN1.644e-1432.09Choline/ethanolamine kinase OS=Homo sapiens GN=CHK... [more]
CHKB_MOUSE4.050e-1330.60Choline/ethanolamine kinase OS=Mus musculus GN=Chk... [more]
CHKB_RAT1.539e-1230.60Choline/ethanolamine kinase OS=Rattus norvegicus G... [more]
CHKA_MOUSE2.625e-1235.34Choline kinase alpha OS=Mus musculus GN=Chka PE=1 ... [more]
KICB1_CAEEL5.848e-1232.67Choline kinase B1 OS=Caenorhabditis elegans GN=ckb... [more]
EKI2_HUMAN9.974e-1229.93Ethanolamine kinase 2 OS=Homo sapiens GN=ETNK2 PE=... [more]
CHKA_HUMAN1.701e-1133.08Choline kinase alpha OS=Homo sapiens GN=CHKA PE=1 ... [more]
EKIA_DICDI2.902e-1128.57Probable ethanolamine kinase A OS=Dictyostelium di... [more]
CHKA_RAT4.950e-1133.83Choline kinase alpha OS=Rattus norvegicus GN=Chka ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0002M05_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002M05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN190005 ID=CN190005; Name=CN190005; organism=Citrus sinensis; type=EST; length=820bp
CCCCCGTTTTTCTTTGACAGGAATGACGAGATTCGGACATTTGAGTTTAT
GTCAAAGCCTGTGCAGGGACCTCGTTTGTTGGGGCGGTTTCATAATGGCC
GAGTTGAAGAGTTCATCAATGCACGGACCCTATCAGCATCTGATATTCGT
GATCCAGAAATTTCTGCTCTTATAGCAGCAAAATTGAAGGAGTTCCATGA
CCTTGATATGCCTGGTCAAAAGATTGTCCGCCTGTGGGATAGGTCGCGAA
ATTGGCTCATAGCAACCAAGAATTTGTCTCCCCCAGAAGAAGCTAGAGCA
TTTCGTTTGGATGCCATTGAGGAGGAAATTTCTACATTAGAAAAGGCACT
CTATCGGAATGATCAGCATATTGGTTTTTGCCACAATGATTTACAATATG
GTAACATAATGATTGACGAAGAGACTAAGTCAATAACCCTAATTGGCAGC
TTTGAACTATGATGCATTAGCATGACATGCATGTGGAGTTGTGTCTCTGC
CTGGTTGAATAACTCATAGGTCATTGATGGAGTGACTAGGGTAGTATGGA
TTTTCAGTTGAATGAGATCAAGTGAAGATACAATTTTCAGGACTATGAGT
ATGCAAGTTACAATCCTGTAGCATATGATATTGCAAATCACTTCTGTGAG
ATGGCTGCCGACTATCATACAGAAACACCACATCTGATGGACTACAGTAA
ATATCCTGATTTGGAGGAGCGTCATCGATTTCTGCATGCTTATCTGAGTT
CCACTGGTGATCAACCTAGTGATGCGGAAGTAAAGCAACTACTTCAGGAT
GTTGAGAAATATACACTTGC
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