CN189979

Overview
NameCN189979
Unique NameCN189979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189979 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.069e-55
Identity = 106/208 (50.96%), Postives = 150/208 (72.12%), Query Frame = 2
Query:   59 VKVLGFWCSPFVFRVVWALKLKGVEFEYIEEDVFNKSTRLLELNPVHKKVPVLVHDDKVIVESFVILEYIDETWPQDPLLPQDPYEKATARFWAKFADEKLIQTAWKSTWTKGE-EKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIAIGWINYLIPIWEEIASIQFLDPKRFPAITAWKSKFLDNPLIXETLPPREKLLIYF 679
            VK+LG   SPFV RV  ALKLKGVE++++EE++ NKS  LL+ NPVHKKVPV VH+++ I ES VI+EYIDETW  +P+LP DPY++A ARFW+KF D+K++    KS +T  E E+E  ++ T EAL+ +E ELK K +FGGE ++  ++IA  +I + IPI++EIA +Q    ++FP +  W  +FL++P + E LPPR+ L  YF
Sbjct:    8 VKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNNPILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGE-EFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYF 214          
BLAST of CN189979 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.726e-51
Identity = 98/208 (47.12%), Postives = 146/208 (70.19%), Query Frame = 2
Query:   56 KVKVLGFWCSPFVFRVVWALKLKGVEFEYIEEDVFNKSTRLLELNPVHKKVPVLVHDDKVIVESFVILEYIDETWPQDPLLPQDPYEKATARFWAKFADEKLIQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIAIGWINYLIPIWEEIASIQFLDPKRFPAITAWKSKFLDNPLIXETLPPREKLLIYF 679
            +VK+LGFW SPF  RV WALK+KGV++EYIEED  NKS+ LL+ NP+HKKVPVL+H+ K IVES VILEYIDET+    +LP+DPY++A ARFWAKF D+K +    K+   KGEE+E   +   E L+ ++ ELK K +F G+ K+ + +IA   + + + ++EE + +  +  ++FP    W+ ++++   I E+LPPR++LL ++
Sbjct:    3 EVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPSILPKDPYDRALARFWAKFLDDK-VPAVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGD-KFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAFY 208          
BLAST of CN189979 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.353e-50
Identity = 96/208 (46.15%), Postives = 145/208 (69.71%), Query Frame = 2
Query:   56 KVKVLGFWCSPFVFRVVWALKLKGVEFEYIEEDVFNKSTRLLELNPVHKKVPVLVHDDKVIVESFVILEYIDETWPQDPLLPQDPYEKATARFWAKFADEKLIQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIAIGWINYLIPIWEEIASIQFLDPKRFPAITAWKSKFLDNPLIXETLPPREKLLIYF 679
            +VK+LGFW SPF  RV WALK+KGV++EYIEED  NKS+ LL+ NPV+KKVPVL+H+ K IVES +ILEYIDET+    +LP+DPY++A ARFWAKF D+K +     + + KGEE+E   +   E L+ ++ ELK K +F G+ K+ + +IA   + + + ++EE      +  ++FP  + W+ ++++   + E+LPPR++LL +F
Sbjct:    3 EVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPSILPKDPYDRALARFWAKFLDDK-VAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGD-KFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAFF 208          
BLAST of CN189979 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.936e-50
Identity = 96/208 (46.15%), Postives = 144/208 (69.23%), Query Frame = 2
Query:   56 KVKVLGFWCSPFVFRVVWALKLKGVEFEYIEEDVFNKSTRLLELNPVHKKVPVLVHDDKVIVESFVILEYIDETWPQDPLLPQDPYEKATARFWAKFADEKLIQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIAIGWINYLIPIWEEIASIQFLDPKRFPAITAWKSKFLDNPLIXETLPPREKLLIYF 679
            +VK+LGFW SPF  RV WALKLKGV++EYIEED  NKS+ LL+ NPVHKKVPVL+H+ K IVES VILEYIDET+    +LP+DPY++A ARFW+KF  +K +     + + KGEE+E   +   E L+ ++ ELK K +F G+ K+ + +IA   + + + ++EE   +  +  ++FP  + W+ ++++   + E+LP R++LL +F
Sbjct:    3 EVKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETFEGPSILPKDPYDRALARFWSKFLGDK-VAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFVGD-KFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDELLAFF 208          
BLAST of CN189979 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.215e-44
Identity = 92/208 (44.23%), Postives = 134/208 (64.42%), Query Frame = 2
Query:   56 KVKVLGFWCSPFVFRVVWALKLKGVEFEYIEEDVFNKSTRLLELNPVHKKVPVLVHDDKVIVESFVILEYIDETWPQDPLLPQDPYEKATARFWAKFADEKLIQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIAIGWINYLIPIWEEIASIQFLDPKRFPAITAWKSKFLDNPLIXETLPPREKLLIYF 679
            +VK+LG   SPF  RV WALK+KGV++E+IEED+ NKS  LL+ NP+HKK+PVL+H+ K I ES VILEYIDE +    +LP+DPY++A ARFWAK+ ++K     WKS ++KGEE+E A +   E L+ ++ E K K  F G+ K+ + +I        + I EE++ I     ++FP   AW+ ++       E  P R++LLI +
Sbjct:    3 EVKLLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAFEGPSILPKDPYDRALARFWAKYVEDK-GAAVWKSFFSKGEEQEKAKEEAYEMLKILDNEFKDKKCFVGD-KFGFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEYCTQN--EEYFPSRDELLIRY 206          
BLAST of CN189979 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.506e-44
Identity = 96/209 (45.93%), Postives = 132/209 (63.16%), Query Frame = 2
Query:   56 KVKVLGFWCSPFVFRVVWALKLKGVEFEYIEEDVFNKSTRLLELNPVHKKVPVLVHDDKVIVESFVILEYIDETWPQDPLLPQDPYEKATARFWAKFADEKLIQTAWKSTWTKGEEKEDAL-KATMEALEKIEGELKGKSYFGGENKYAYLEIAIGWINYLIPI-----WEEIASIQFLDPKRFPAITAWKSKFLDNPLIXETLPPREK 664
            +VK+LG W SPF  RV  ALKLKG+ +EY+EE + NKS  LL LNP+HKKVPVLVH+ K I+ES VILEYIDETWPQ+P+LPQDPYE++ ARF+AK  DE+++   + S     E+  + L +   E +  +E EL GK YFGG+    +L+   G    LIP      WE I  ++ +  ++FP    W        ++ + +PPRE+
Sbjct:    6 EVKLLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQNPILPQDPYERSKARFFAKLVDEQIMNVGFISMARADEKGREVLAEQVRELIMYLEKELVGKDYFGGKT-VGFLDFVAG---SLIPFCLERGWEGI-GLEVITEEKFPEFKRWVRNLEKVEIVKDCVPPREE 209          
BLAST of CN189979 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.514e-38
Identity = 84/207 (40.58%), Postives = 128/207 (61.84%), Query Frame = 2
Query:   50 ATKVKVLGFWCSPFVFRVVWALKLKGVEFEYIEEDVFNKSTRLLELNPVHKKVPVLVHDDKVIVESFVILEYIDETW-PQDPLLPQDPYEKATARFWAKFADEKLIQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIAIGWINYLIPIWEEIASIQFLDPKRFPAITAWKSKFLDNPLIXETLPPREKL 667
            +  V +L FW S F  R+  AL LKG+++E  EE++ +KS  LLE+NPVHKK+P+L+H+ K I ES  ILEYIDE W  + PLLP DPYE++ ARFWA + D+K+  T  +    KGE++E+A K  +E L+ +EGEL  K+YFGG+N   ++++A+         +E  A+  F      P +  W    +++  + ++LP   K+
Sbjct:    3 SNNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYFGGDN-LGFVDVALVPFTSWFYSYETCAN--FSIEAECPKLVVWAKTCMESESVSKSLPHPHKI 206          
BLAST of CN189979 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.514e-37
Identity = 85/207 (41.06%), Postives = 123/207 (59.42%), Query Frame = 2
Query:   56 KVKVLGFWCSPFVFRVVWALKLKGVEFEYIEEDVFNKSTRLLELNPVHKKVPVLVHDDKVIVESFVILEYIDETWPQDP--LLPQDPYEKATARFWAKFADEKLIQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIAIGWINYLIPIWEEIASIQFLDPKRFPAITAWKSKFLDNPLIXETLPPREKLL 670
            +V +L FW S F  R+  AL  K +++EY EED+ NKS  LL++NP+HKK+PVL+H+ K I ES + +EYI+E W      LLP DPY++A ARFWA + D+KL     K   TKGEE+E A K  +E L+ +EG L  K YFGGE+ + +++IA+  I Y    +       F      P   AW  + +    + ++LP + K+L
Sbjct:    5 EVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGES-FGFVDIAL--IGYYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVL 208          
BLAST of CN189979 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.413e-36
Identity = 84/208 (40.38%), Postives = 127/208 (61.06%), Query Frame = 2
Query:   56 KVKVLGFWCSPFVFRVVWALKLKGVEFEYIEEDVFNKSTRLLELNPVHKKVPVLVHDDKVIVESFVILEYIDETWPQ--DPLLPQDPYEKATARFWAKFADEKLIQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIA-IGWINYLIPIWEEIASIQFLDPKRFPAITAWKSKFLDNPLIXETLPPREKLL 670
            +V +L FW S F  R+  AL  K +++EY +ED+ NKS  LL++NP+HKK+PVL+H+ K I ES + +EYI+E W      LLP DPY++A ARFWA + D+KL     K   TKGEE+E A K  +E L+ +EG L  + YFGGE+ + +++IA IG+ ++    +E   +  F      P   AW  + +    + ++LP + K+L
Sbjct:    5 EVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGES-FGFVDIALIGFYSWFY-AYETFGN--FSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVL 208          
BLAST of CN189979 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.028e-34
Identity = 81/207 (39.13%), Postives = 126/207 (60.87%), Query Frame = 2
Query:   50 ATKVKVLGFWCSPFVFRVVWALKLKGVEFEYIEEDVFNKSTRLLELNPVHKKVPVLVHDDKVIVESFVILEYIDETWPQD-PLLPQDPYEKATARFWAKFADEKLIQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIAIGWINYLIPIWEEIASIQFLDPKRFPAITAWKSKFLDNPLIXETLPPREKL 667
            +  V +L F  S F  R+  AL LKG+++E  EE++ +KS  LLE+NPVHKK+P+L+H+ K I ES  ILEYIDE W +  PLLP DPY+++ ARFWA + D K+  T  +    KGE++E+A K  +E  + +EGEL  K+YFGG+N   ++++A+         +E  A+       R   +  W++  ++N  + ++LP   K+
Sbjct:    3 SNNVVLLDFSGSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYFGGDN-LGFVDVALVPFTSWFYSYETCANFSIEAECR--KLVVWQN-CMENERVSKSLPHPHKI 205          
The following BLAST results are available for this feature:
BLAST of CN189979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
GSTX6_SOYBN1.069e-5550.96Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX1_TOBAC2.726e-5147.12Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX2_TOBAC1.353e-5046.15Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC3.936e-5046.15Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_SOLTU4.215e-4444.23Probable glutathione S-transferase OS=Solanum tube... [more]
GSTXA_ARATH5.506e-4445.93Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTXA_TOBAC4.514e-3840.58Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX4_TOBAC8.514e-3741.06Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC9.413e-3640.38Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX1_NICPL3.028e-3439.13Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002L14_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002L14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189979 ID=CN189979; Name=CN189979; organism=Citrus sinensis; type=EST; length=682bp
GAGGTAGATCTCACCTCACATTCACAAATCACAATAGCAGAAGATTATGG
CAACAAAAGTGAAGGTTTTGGGGTTTTGGTGTAGTCCTTTTGTGTTTAGG
GTAGTATGGGCATTGAAGCTAAAGGGTGTTGAATTTGAATACATTGAAGA
AGACGTCTTTAACAAAAGCACCAGGCTTCTTGAGCTGAACCCAGTTCATA
AAAAGGTTCCTGTGCTTGTTCATGATGACAAAGTGATAGTTGAGTCGTTT
GTTATTCTGGAGTACATCGATGAGACATGGCCACAAGATCCGTTGCTGCC
TCAAGATCCTTATGAAAAAGCCACGGCTCGATTTTGGGCTAAATTTGCAG
ATGAAAAGCTGATACAAACTGCATGGAAGTCAACGTGGACCAAAGGAGAG
GAAAAAGAGGATGCTCTGAAAGCAACAATGGAAGCTTTGGAGAAGATAGA
GGGAGAACTCAAAGGAAAAAGCTACTTTGGAGGAGAGAACAAATATGCGT
ATTTGGAAATTGCAATTGGATGGATCAATTACCTTATACCAATTTGGGAA
GAAATTGCATCCATTCAATTTCTTGACCCGAAAAGATTTCCAGCCATTAC
TGCATGGAAAAGCAAGTTTCTGGATAACCCTTTGATCNAAGAAACCCTGC
CACCAAGGGAGAAATTGCTTATCTATTTTCAC
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