CN189947

Overview
NameCN189947
Unique NameCN189947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length729
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189947 vs. ExPASy Swiss-Prot
Match: HEMH_CUCSA (Ferrochelatase-2, chloroplastic OS=Cucumis sativus GN=HEMH PE=2 SV=1)

HSP 1 Score: 409.068 bits (1050), Expect = 1.257e-113
Identity = 203/241 (84.23%), Postives = 217/241 (90.04%), Query Frame = 3
Query:    6 AAEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA 728
            A +DKVGVLLLNLGGP+TL DVQPFL+NLFADPDIIRLPRLFRFLQ PLAKLIS  RAPKSKEGYA+IGGGSPLRKITDEQAQALK AL  KN+  NVYVGMRYWYPFTEEA+QQIKRD ITRLVVLPLYPQ+SISTTGSSIRVLQ +FREDAYLS LPVSII+SWYQREGY+ SMADL+Q EL  F  P+EVMIFFSAHGVPVSYVE AGDPY+DQMEECI LIMQ LK RGI N+HTLA
Sbjct:  110 AVDDKVGVLLLNLGGPETLDDVQPFLYNLFADPDIIRLPRLFRFLQEPLAKLISTYRAPKSKEGYASIGGGSPLRKITDEQAQALKMALAEKNMSTNVYVGMRYWYPFTEEAIQQIKRDGITRLVVLPLYPQYSISTTGSSIRVLQKMFREDAYLSSLPVSIIKSWYQREGYIKSMADLMQAELKNFANPQEVMIFFSAHGVPVSYVENAGDPYKDQMEECICLIMQELKARGIGNEHTLA 350          
BLAST of CN189947 vs. ExPASy Swiss-Prot
Match: HEMH1_ARATH (Ferrochelatase-1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=HEM15 PE=2 SV=1)

HSP 1 Score: 394.815 bits (1013), Expect = 2.453e-109
Identity = 193/240 (80.42%), Postives = 218/240 (90.83%), Query Frame = 3
Query:    9 AEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA 728
            AEDK+GVLLLNLGGP+TL+DVQPFL+NLFADPDIIRLPR F+FLQ  +AK ISVVRAPKSKEGYAAIGGGSPLRKITDEQA A+K +L+AKN+  NVYVGMRYWYPFTEEAVQQIK+D+ITRLVVLPLYPQ+SISTTGSSIRVLQ++FR+D YL+ +PV+II+SWYQR GYVNSMADLI+KEL  F  P+EVMIFFSAHGVPVSYVE AGDPY+ QMEECI LIM+ LK RG+ NDH LA
Sbjct:   86 AEDKIGVLLLNLGGPETLNDVQPFLYNLFADPDIIRLPRPFQFLQGTIAKFISVVRAPKSKEGYAAIGGGSPLRKITDEQADAIKMSLQAKNIAANVYVGMRYWYPFTEEAVQQIKKDKITRLVVLPLYPQYSISTTGSSIRVLQDLFRKDPYLAGVPVAIIKSWYQRRGYVNSMADLIEKELQTFSDPKEVMIFFSAHGVPVSYVENAGDPYQKQMEECIDLIMEELKARGVLNDHKLA 325          
BLAST of CN189947 vs. ExPASy Swiss-Prot
Match: HEMH_HORVU (Ferrochelatase-2, chloroplastic OS=Hordeum vulgare GN=HEMH PE=2 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 3.204e-109
Identity = 192/241 (79.67%), Postives = 215/241 (89.21%), Query Frame = 3
Query:    6 AAEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA 728
            A E+KVGVLLLNLGGP+TL+DVQPFLFNLFADPDIIRLPRLFRFLQ PLAKLIS  RAPKS EGYA+IGGGSPLRKITDEQA ALK AL++KNL  ++YVGMRYWYPFTEEA+ QIK+D+IT+LVVLPLYPQ+SIST+GSSIRVLQNI +ED Y + LP+SII SWYQREGYV SMADLI+KEL  F  PEEVMIFFSAHGVP++YV+ AGDPYRDQME+CI LIM+ LK RG  NDHTLA
Sbjct:  104 AVEEKVGVLLLNLGGPETLNDVQPFLFNLFADPDIIRLPRLFRFLQRPLAKLISTFRAPKSNEGYASIGGGSPLRKITDEQANALKVALKSKNLEADIYVGMRYWYPFTEEAIDQIKKDKITKLVVLPLYPQYSISTSGSSIRVLQNIVKEDPYFAGLPISIIESWYQREGYVKSMADLIEKELSVFSNPEEVMIFFSAHGVPLTYVKDAGDPYRDQMEDCIALIMEELKSRGTLNDHTLA 344          
BLAST of CN189947 vs. ExPASy Swiss-Prot
Match: HEMH1_ORYSJ (Ferrochelatase-1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0297000 PE=2 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 3.204e-109
Identity = 194/241 (80.50%), Postives = 214/241 (88.80%), Query Frame = 3
Query:    6 AAEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA 728
            AAE+KVGVLLLNLGGP+TL DVQPFLFNLFADPDIIRLPRLFRFLQ PLAKLIS  RAPKSKEGYA+IGGGSPLRKITDEQA ALK AL+ KNL  N+YVGMRYWYPFTEEA+ QIK+D+IT+LVVLPLYPQ+SIST+GSSIRVLQNI +ED+Y + LP+SII SWYQR+GYV SMADLI+KEL  F  PEEVMIFFSAHGVP++YV  AGDPYRDQME+CI LIM  LK RGI N HTLA
Sbjct:  102 AAEEKVGVLLLNLGGPETLDDVQPFLFNLFADPDIIRLPRLFRFLQRPLAKLISTFRAPKSKEGYASIGGGSPLRKITDEQANALKVALKKKNLNANIYVGMRYWYPFTEEAIDQIKKDKITKLVVLPLYPQYSISTSGSSIRVLQNIVKEDSYFAGLPISIIESWYQRDGYVKSMADLIEKELSIFSNPEEVMIFFSAHGVPLTYVTDAGDPYRDQMEDCIALIMGELKSRGILNSHTLA 342          
BLAST of CN189947 vs. ExPASy Swiss-Prot
Match: HEMH_ORYSI (Ferrochelatase-2, chloroplastic OS=Oryza sativa subsp. indica GN=HEMH PE=2 SV=2)

HSP 1 Score: 360.533 bits (924), Expect = 5.127e-99
Identity = 174/238 (73.11%), Postives = 209/238 (87.82%), Query Frame = 3
Query:   15 DKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA 728
            +K+GVLLLNLGGP+TL DVQPFLFNLFADPDIIRLPRLFRFLQ PLA+ ISVVRAPKSKEGYA+IGGGSPLR+ITD QA+AL+ AL  K++P  VYVGMRYW+PFTEEA++QIKRD IT+LVVLPLYPQFSIST+GSS+R+L+ IFRED YL  +  ++I SWYQREGY+ +MA LI+KEL  F +P++VMIFFSAHGVP++YVE+AGDPY+ +MEEC+ LIM+ L+ RGI N  TLA
Sbjct:  112 EKIGVLLLNLGGPETLDDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRQITDAQAEALRKALCDKDIPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLEGIFREDEYLVNMQHTVIPSWYQREGYIKAMATLIEKELRTFSEPQKVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRGITNSCTLA 349          
BLAST of CN189947 vs. ExPASy Swiss-Prot
Match: HEMH2_ORYSJ (Ferrochelatase-2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0361200 PE=2 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 5.127e-99
Identity = 174/238 (73.11%), Postives = 209/238 (87.82%), Query Frame = 3
Query:   15 DKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA 728
            +K+GVLLLNLGGP+TL DVQPFLFNLFADPDIIRLPRLFRFLQ PLA+ ISVVRAPKSKEGYA+IGGGSPLR+ITD QA+AL+ AL  K++P  VYVGMRYW+PFTEEA++QIKRD IT+LVVLPLYPQFSIST+GSS+R+L+ IFRED YL  +  ++I SWYQREGY+ +MA LI+KEL  F +P++VMIFFSAHGVP++YVE+AGDPY+ +MEEC+ LIM+ L+ RGI N  TLA
Sbjct:  112 EKIGVLLLNLGGPETLDDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRQITDAQAEALRKALCDKDIPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLEGIFREDEYLVNMQHTVIPSWYQREGYIKAMATLIEKELRTFSEPQKVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRGITNSCTLA 349          
BLAST of CN189947 vs. ExPASy Swiss-Prot
Match: HEMH2_ARATH (Ferrochelatase-2, chloroplastic OS=Arabidopsis thaliana GN=At2g30390 PE=2 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 5.306e-96
Identity = 169/237 (71.31%), Postives = 202/237 (85.23%), Query Frame = 3
Query:   18 KVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA 728
            K+GVLLLNLGGP+TL DVQPFLFNLFADPDIIRLP +F+FLQ PLA+ ISV RAPKSKEGYA+IGGGSPLR ITD QA+ L+  L  KN+P  VYVGMRYW+PFTEEA++QIKRD IT+LVVLPLYPQFSIST+GSS+R+L+ IFRED YL  +  ++I SWYQREGY+ +MA+LIQ ELGKF  P +V+IFFSAHGVP++YVE+AGDPY+ +MEEC+ LIM+ L  R I N +TLA
Sbjct:  100 KIGVLLLNLGGPETLDDVQPFLFNLFADPDIIRLPPVFQFLQKPLAQFISVARAPKSKEGYASIGGGSPLRHITDAQAEELRKCLWEKNVPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLERIFREDEYLVNMQHTVIPSWYQREGYIKAMANLIQSELGKFGSPNQVVIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELDKRKITNAYTLA 336          
BLAST of CN189947 vs. ExPASy Swiss-Prot
Match: HEMH_CYAP7 (Ferrochelatase OS=Cyanothece sp. (strain PCC 7424) GN=hemH PE=3 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 4.989e-78
Identity = 147/237 (62.03%), Postives = 185/237 (78.06%), Query Frame = 3
Query:   18 KVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA 728
            +VGVLLLNLGGPD L DV+PFLFNLF+DP+IIRLP    +LQ PLA LIS +R+ KS+E Y  IGGGSPLRKIT+ QA+AL+  LE     V VY+GMRYW+PFTEEA+ +IKRDRI +LV+LPLYPQFSIST+GSS RVL+ I+++D  L ++  S+I SWY   GY+ +MADLI +ELG++  P+ V IFFSAHGVP SYV++AGDPY+ ++EEC  LIM+ L      ND+TLA
Sbjct:    3 RVGVLLLNLGGPDRLEDVRPFLFNLFSDPEIIRLP--VPWLQKPLAWLISTLRSRKSQENYLQIGGGSPLRKITEAQAEALEKRLEEIGHSVQVYIGMRYWHPFTEEAIARIKRDRIQKLVILPLYPQFSISTSGSSFRVLEEIWKQDPSLKQIEYSLIPSWYDNPGYLEAMADLISQELGQYSNPDTVHIFFSAHGVPQSYVDEAGDPYQKEIEECTRLIMKTLNR---PNDYTLA 234          
BLAST of CN189947 vs. ExPASy Swiss-Prot
Match: HEMH_CYAP4 (Ferrochelatase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=hemH PE=3 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 8.807e-75
Identity = 138/237 (58.23%), Postives = 181/237 (76.37%), Query Frame = 3
Query:   18 KVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA 728
            ++GVLLLNLGGPD L DV+PFL+NLF+DP+IIRLP  F +LQ PLA LIS  RA KS++ Y  IGGGSPLR+IT+EQ +AL+  L ++   + VY+GMRYW+PFTEEA+  IK+D ITRLV+LPLYPQFSIST+GSS R+L+++++ D  L  +  ++I SWY R GY  +MA+L+++EL  F +P+ V IFFSAHGVP+SYV +AGDPY+ ++E C  LIMQ L      N H LA
Sbjct:    3 RIGVLLLNLGGPDQLEDVRPFLYNLFSDPEIIRLP--FTWLQKPLAWLISTTRARKSQQNYRLIGGGSPLRRITEEQGKALQAHLASQGQDIQVYIGMRYWHPFTEEAIAAIKQDGITRLVILPLYPQFSISTSGSSFRLLEDLWQRDPQLQAIDYTVIPSWYDRPGYTQAMAELLREELDHFAEPDRVTIFFSAHGVPLSYVTEAGDPYQAEIEGCTALIMQALNR---PNPHVLA 234          
BLAST of CN189947 vs. ExPASy Swiss-Prot
Match: HEMH_THEEB (Ferrochelatase OS=Thermosynechococcus elongatus (strain BP-1) GN=hemH PE=3 SV=2)

HSP 1 Score: 279.641 bits (714), Expect = 1.150e-74
Identity = 139/237 (58.65%), Postives = 181/237 (76.37%), Query Frame = 3
Query:   18 KVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA 728
            + GVLLLNLGGPD   DV+PFL+NLF+DP+IIRLP  FR+LQ PLA  IS  RA +S+  YA IGGGSPLR+IT++QA+ALK ALE   +  N+Y+GMRYW+PFTEEA+ QIK D+I  LV+LPLYPQFSIST+GSS R+L++++ +D  L ++  ++I SWY   GYV +MADLI++EL +   P+E +IFFSAHGVP SYV +AGDPY++++E C+ LIM  L      N H LA
Sbjct:    4 QTGVLLLNLGGPDRPEDVRPFLYNLFSDPEIIRLP--FRWLQKPLAWFISTSRARRSQANYAQIGGGSPLRRITEQQARALKDALEGIGIEANLYIGMRYWHPFTEEAIAQIKADQIRELVILPLYPQFSISTSGSSFRLLESLWNQDPELQKIRYTLIPSWYNHPGYVAAMADLIRQELDRCPNPDEAVIFFSAHGVPKSYVTEAGDPYQEEIEACVRLIMAALNR---PNAHVLA 235          
The following BLAST results are available for this feature:
BLAST of CN189947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 389
Match NameE-valueIdentityDescription
HEMH_CUCSA1.257e-11384.23Ferrochelatase-2, chloroplastic OS=Cucumis sativus... [more]
HEMH1_ARATH2.453e-10980.42Ferrochelatase-1, chloroplastic/mitochondrial OS=A... [more]
HEMH_HORVU3.204e-10979.67Ferrochelatase-2, chloroplastic OS=Hordeum vulgare... [more]
HEMH1_ORYSJ3.204e-10980.50Ferrochelatase-1, chloroplastic OS=Oryza sativa su... [more]
HEMH_ORYSI5.127e-9973.11Ferrochelatase-2, chloroplastic OS=Oryza sativa su... [more]
HEMH2_ORYSJ5.127e-9973.11Ferrochelatase-2, chloroplastic OS=Oryza sativa su... [more]
HEMH2_ARATH5.306e-9671.31Ferrochelatase-2, chloroplastic OS=Arabidopsis tha... [more]
HEMH_CYAP74.989e-7862.03Ferrochelatase OS=Cyanothece sp. (strain PCC 7424)... [more]
HEMH_CYAP48.807e-7558.23Ferrochelatase OS=Cyanothece sp. (strain PCC 7425 ... [more]
HEMH_THEEB1.150e-7458.65Ferrochelatase OS=Thermosynechococcus elongatus (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002K19_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002K19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189947 ID=CN189947; Name=CN189947; organism=Citrus sinensis; type=EST; length=729bp
GAGGGGCCGCAGAAGATAAGGTTGGGGTGTTGCTTCTGAATCTTGGAGGG
CCTGACACGCTTCATGATGTTCAGCCATTTCTGTTCAATTTATTTGCAGA
TCCAGACATTATACGTCTTCCCAGGCTGTTTCGGTTTCTTCAGTGGCCCT
TGGCAAAGTTGATTTCTGTGGTACGGGCTCCCAAAAGTAAAGAAGGATAT
GCTGCCATAGGAGGTGGCTCACCATTGCGCAAAATAACAGATGAGCAGGC
ACAAGCACTTAAAACAGCTTTAGAAGCCAAAAACTTGCCCGTAAATGTCT
ATGTTGGAATGCGTTATTGGTATCCATTTACTGAAGAAGCTGTTCAGCAG
ATTAAAAGGGACAGAATTACAAGGCTCGTTGTGCTGCCACTTTATCCACA
ATTCTCTATCTCTACAACGGGGTCAAGCATCCGTGTTCTCCAGAATATAT
TTAGGGAAGATGCATATCTATCGAGGCTGCCTGTGTCTATTATAAGGTCC
TGGTATCAACGAGAAGGATACGTCAACTCTATGGCTGACTTGATTCAGAA
AGAGCTAGGGAAGTTCCAAAAACCTGAGGAGGTTATGATATTCTTCAGTG
CCCATGGTGTACCTGTCAGTTATGTTGAGAAAGCTGGTGATCCATACAGA
GATCAGATGGAAGAGTGTATCTACCTAATCATGCAGAGGTTGAAAGATAG
AGGAATCAACAATGATCATACTTTGGCAT
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