CN189910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189910 vs. ExPASy Swiss-Prot
Match: SPC3B_ARATH (Signal peptidase complex subunit 3B OS=Arabidopsis thaliana GN=At5g27430 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 3.052e-46 Identity = 88/103 (85.44%), Postives = 94/103 (91.26%), Query Frame = 2 Query: 143 MHSFGYRANALLTFAVTILALMCTIGSLSDNLNTPSPSAQIEILNINWFQKQPHGNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYDTPKNALNQVSLWDA 451 MHSFGYRANALLTFAVTILA +C I S SDN + +PSAQI+ILNINWFQKQPHGNDEVSLTLNITADLQSLFTWNTKQ+F FVAAEY+T KNALNQVSLWDA Sbjct: 1 MHSFGYRANALLTFAVTILAFICAIASFSDNFSNQNPSAQIQILNINWFQKQPHGNDEVSLTLNITADLQSLFTWNTKQVFAFVAAEYETSKNALNQVSLWDA 103
BLAST of CN189910 vs. ExPASy Swiss-Prot
Match: SPC3A_ARATH (Signal peptidase complex subunit 3A OS=Arabidopsis thaliana GN=At3g05230 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 2.956e-41 Identity = 79/103 (76.70%), Postives = 92/103 (89.32%), Query Frame = 2 Query: 143 MHSFGYRANALLTFAVTILALMCTIGSLSDNLNTPSPSAQIEILNINWFQKQPHGNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYDTPKNALNQVSLWDA 451 MH+FGYRANALLTFAVT LA +C I S SD + +PSA+I+ILNIN F+KQ HGNDEVSLTL+I+ADLQSLFTWNTKQ+F+FVAAEY+TPKN+LNQVSLWDA Sbjct: 1 MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVSLTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDA 103
BLAST of CN189910 vs. ExPASy Swiss-Prot
Match: SPCS3_CHICK (Signal peptidase complex subunit 3 OS=Gallus gallus GN=SPC22 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.080e-14 Identity = 41/101 (40.59%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 161 RANALLTFAVTILALM---CTIGSLSDNLNTPSPSA--QIEILNINWFQKQPHGNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYDTPKNALNQVSLWD 448 RAN+L F+++++A + C I + + P A ++ + N+ F +D +T +ITADLQS+F WN KQLF++++AEY T NALNQV LWD Sbjct: 7 RANSLFAFSLSVMAALTFGCFITTAFKERSVPVSIAVSRVTLRNVEDFTGPRERSDLAFVTFDITADLQSIFDWNVKQLFLYLSAEYSTKNNALNQVVLWD 107
BLAST of CN189910 vs. ExPASy Swiss-Prot
Match: SPCS3_HUMAN (Signal peptidase complex subunit 3 OS=Homo sapiens GN=SPCS3 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 5.809e-13 Identity = 39/101 (38.61%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 161 RANALLTFAVTILALM---CTIGSLSDNLNTPSPS--AQIEILNINWFQKQPHGNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYDTPKNALNQVSLWD 448 RAN+L F+++++A + C I + + + P ++I + N+ F +D +T +ITADL+++F WN KQLF++++AEY T NALNQV LWD Sbjct: 7 RANSLFAFSLSVMAALTFGCFITTAFKDRSVPVRLHVSRIMLKNVEDFTGPRERSDLGFITFDITADLENIFDWNVKQLFLYLSAEYSTKNNALNQVVLWD 107
BLAST of CN189910 vs. ExPASy Swiss-Prot
Match: SPCS3_CANFA (Signal peptidase complex subunit 3 OS=Canis familiaris GN=SPCS3 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 5.809e-13 Identity = 39/101 (38.61%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 161 RANALLTFAVTILALM---CTIGSLSDNLNTPSPS--AQIEILNINWFQKQPHGNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYDTPKNALNQVSLWD 448 RAN+L F+++++A + C I + + + P ++I + N+ F +D +T +ITADL+++F WN KQLF++++AEY T NALNQV LWD Sbjct: 7 RANSLFAFSLSVMAALTFGCFITTAFKDRSVPVRLHVSRIMLKNVEDFTGPRERSDLGFITFDITADLENIFDWNVKQLFLYLSAEYSTKNNALNQVVLWD 107
BLAST of CN189910 vs. ExPASy Swiss-Prot
Match: SPCS3_BOVIN (Signal peptidase complex subunit 3 OS=Bos taurus GN=SPCS3 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 5.809e-13 Identity = 39/101 (38.61%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 161 RANALLTFAVTILALM---CTIGSLSDNLNTPSPS--AQIEILNINWFQKQPHGNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYDTPKNALNQVSLWD 448 RAN+L F+++++A + C I + + + P ++I + N+ F +D +T +ITADL+++F WN KQLF++++AEY T NALNQV LWD Sbjct: 7 RANSLFAFSLSVMAALTFGCFITTAFKDRSVPVRLHVSRIMLKNVEDFTGPRERSDLGFITFDITADLENIFDWNVKQLFLYLSAEYSTKNNALNQVVLWD 107
BLAST of CN189910 vs. ExPASy Swiss-Prot
Match: SPCS3_CAEBR (Probable signal peptidase complex subunit 3 OS=Caenorhabditis briggsae GN=CBG22979 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.869e-11 Identity = 36/107 (33.64%), Postives = 58/107 (54.21%), Query Frame = 2 Query: 143 MHSFGYRANALLTFAVTILALMCTIGSLSDNLNTPSPSAQIEILNINWFQKQPHGNDE-----VSLTLNITADLQSLFTWNTKQLFIFVAAEYDTPKNALNQVSLWD 448 MH+ RAN+LL F + ++A + LS + S +E+ +I + + D+ +L N+ D LF WN KQLF+++ AEY + +NA+NQV +WD Sbjct: 1 MHNLLSRANSLLAFTLWVMAAVTAACFLSTVFLDYTVSNHLEVNDIKIRNVRDYATDDKQADLATLAFNLKVDFSRLFNWNVKQLFVYLVAEYKSAENAVNQVVIWD 107
BLAST of CN189910 vs. ExPASy Swiss-Prot
Match: SPCS3_DICDI (Signal peptidase complex subunit 3 OS=Dictyostelium discoideum GN=spcs3 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.188e-11 Identity = 38/103 (36.89%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 143 MHSFGYRANALLTFAVTILALMCTIGSLSDNLNTPSPSAQIEILNINWFQKQPHGNDEVS-LTLNITADLQSLFTWNTKQLFIFVAAEYDTPKNALNQVSLWD 448 MHS RAN ++ F +L + + LS + I++ I+ F Q N E S +++++ A+L+ LF WNTK LF++V AEY T +N L+QV +WD Sbjct: 1 MHSLSQRANTIVCFGGIVLVGVLLLNVLSRAFFSDHVDVDIKLNEIHRFNTQR--NFEYSFISIDLDANLEPLFNWNTKMLFLYVTAEYRTKQNVLSQVVVWD 101
BLAST of CN189910 vs. ExPASy Swiss-Prot
Match: SPCS3_MOUSE (Signal peptidase complex subunit 3 OS=Mus musculus GN=Spcs3 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.437e-11 Identity = 37/107 (34.58%), Postives = 62/107 (57.94%), Query Frame = 2 Query: 143 MHSFGYRANALLTFAVTILALM---CTIGSLSDNLNTPSPS--AQIEILNINWFQKQPHGNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYDTPKNALNQVSLWD 448 M+S RAN+L F ++++A + C + + + + P ++I + + F +D +T +I+ADL+ F WN KQLF++++AEY T NA+NQV LWD Sbjct: 1 MNSLLSRANSLFAFTLSVMAALTLGCILTTAFKDRSAPVRLHVSRILLKKVEDFTGPRKKSDLGFITFHISADLEKTFDWNVKQLFLYLSAEYSTKSNAVNQVVLWD 107
BLAST of CN189910 vs. ExPASy Swiss-Prot
Match: SPCS3_CAEEL (Probable signal peptidase complex subunit 3 OS=Caenorhabditis elegans GN=K12H4.4 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.437e-11 Identity = 34/107 (31.78%), Postives = 57/107 (53.27%), Query Frame = 2 Query: 143 MHSFGYRANALLTFAVTILALM---CTIGSLSDNLNTPSPSA--QIEILNINWFQKQPHGNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYDTPKNALNQVSLWD 448 MH+ RANALL F + ++A + C + ++ + P+ +++ N+ + D +L N+ D +F WN KQLF+++ AEY + N +NQV LWD Sbjct: 1 MHNLLSRANALLAFTLWVMAAVTAACFLSTVFLDYTVPTKLTVNDVKVRNVVDYATDEQQADLATLNFNLKVDFSKIFNWNVKQLFVYLVAEYKSKVNEVNQVVLWD 107 The following BLAST results are available for this feature:
BLAST of CN189910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189910 ID=CN189910; Name=CN189910; organism=Citrus sinensis; type=EST; length=451bpback to top |