CN189905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189905 vs. ExPASy Swiss-Prot
Match: EF1B_ORYSJ (Elongation factor 1-beta OS=Oryza sativa subsp. japonica GN=Os07g0662500 PE=1 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 3.623e-21 Identity = 48/54 (88.89%), Postives = 52/54 (96.30%), Query Frame = -2 Query: 134 SKLVPVGYGIKKLQIMITIVDDLVSVDSLIEDHLTAEPCNEYIQSCDIVAFNKI 295 SKLVPVGYGIKKLQIM+TIVDDLVSVDSLIE+HLT EP NE++QSCDIVAFNKI Sbjct: 171 SKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEHLTEEPINEFVQSCDIVAFNKI 224
BLAST of CN189905 vs. ExPASy Swiss-Prot
Match: EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 1.054e-20 Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = -2 Query: 134 SKLVPVGYGIKKLQIMITIVDDLVSVDSLIEDHLTAEPCNEYIQSCDIVAFNKI 295 SKLV VGYGIKKLQIM+TIVDDLVSVD L+ED+LTAEP NEYIQSCDIVAFNKI Sbjct: 173 SKLVAVGYGIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 226
BLAST of CN189905 vs. ExPASy Swiss-Prot
Match: EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 2.348e-20 Identity = 47/54 (87.04%), Postives = 51/54 (94.44%), Query Frame = -2 Query: 134 SKLVPVGYGIKKLQIMITIVDDLVSVDSLIEDHLTAEPCNEYIQSCDIVAFNKI 295 SKLVPVGYGIKKL IM+TIVDDLVSVD+LIED+LT EP NEY+QSCDIVAFNKI Sbjct: 178 SKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQSCDIVAFNKI 231
BLAST of CN189905 vs. ExPASy Swiss-Prot
Match: EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 2.348e-20 Identity = 48/54 (88.89%), Postives = 50/54 (92.59%), Query Frame = -2 Query: 134 SKLVPVGYGIKKLQIMITIVDDLVSVDSLIEDHLTAEPCNEYIQSCDIVAFNKI 295 SKLVPVGYGIKKLQIM+TIVDDLVSVDSLIED+ EP NEYIQSCDIVAFNKI Sbjct: 176 SKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFNKI 229
BLAST of CN189905 vs. ExPASy Swiss-Prot
Match: EF1D2_ORYSJ (Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica GN=Os03g0406200 PE=2 SV=3) HSP 1 Score: 95.9005 bits (237), Expect = 6.832e-20 Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = -2 Query: 134 SKLVPVGYGIKKLQIMITIVDDLVSVDSLIEDHLTAEPCNEYIQSCDIVAFNKI 295 SKLVPVGYGIKKLQIM+TIVDDLVSVDSLIED+ EP NE+IQSCDIVAFNKI Sbjct: 173 SKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEFIQSCDIVAFNKI 226
BLAST of CN189905 vs. ExPASy Swiss-Prot
Match: EF1B1_ARATH (Elongation factor 1-beta 1 OS=Arabidopsis thaliana GN=At5g12110 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 6.832e-20 Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = -2 Query: 134 SKLVPVGYGIKKLQIMITIVDDLVSVDSLIEDHLTAEPCNEYIQSCDIVAFNKI 295 SKLVPVGYGIKKL IM+TIVDDLVSVD+LIEDHLT+EP NEYIQS DIVAFNKI Sbjct: 175 SKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDHLTSEPNNEYIQSVDIVAFNKI 228
BLAST of CN189905 vs. ExPASy Swiss-Prot
Match: EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 1.988e-19 Identity = 44/54 (81.48%), Postives = 50/54 (92.59%), Query Frame = -2 Query: 134 SKLVPVGYGIKKLQIMITIVDDLVSVDSLIEDHLTAEPCNEYIQSCDIVAFNKI 295 SKLVPVGYGIKKLQI+ TIVDDLVS+D++IE+ LT EP NEY+QSCDIVAFNKI Sbjct: 178 SKLVPVGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
BLAST of CN189905 vs. ExPASy Swiss-Prot
Match: EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.391e-19 Identity = 44/54 (81.48%), Postives = 49/54 (90.74%), Query Frame = -2 Query: 134 SKLVPVGYGIKKLQIMITIVDDLVSVDSLIEDHLTAEPCNEYIQSCDIVAFNKI 295 SKLVPVGYGIKKL IM TIVDDLVS+D++IE+ LT EP NEY+QSCDIVAFNKI Sbjct: 178 SKLVPVGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
BLAST of CN189905 vs. ExPASy Swiss-Prot
Match: EF1B2_ARATH (Elongation factor 1-beta 2 OS=Arabidopsis thaliana GN=At5g19510 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.391e-19 Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = -2 Query: 134 SKLVPVGYGIKKLQIMITIVDDLVSVDSLIEDHLTAEPCNEYIQSCDIVAFNKI 295 SKLVPVGYGIKKL IM TIVDDLVS D+LIED LT+EP NEYIQSCDIVAFNKI Sbjct: 171 SKLVPVGYGIKKLTIMFTIVDDLVSPDNLIEDFLTSEPNNEYIQSCDIVAFNKI 224
BLAST of CN189905 vs. ExPASy Swiss-Prot
Match: EF1B_WHEAT (Elongation factor 1-beta OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.514e-14 Identity = 39/54 (72.22%), Postives = 44/54 (81.48%), Query Frame = -2 Query: 134 SKLVPVGYGIKKLQIMITIVDDLVSVDSLIEDHLTAEPCNEYIQSCDIVAFNKI 295 SKL+PVGYGIKKLQIM+TI+DDL S IE+ L P NEY+QSCDIVAFNKI Sbjct: 165 SKLMPVGYGIKKLQIMLTIIDDLASTP--IEEVLCEAPINEYVQSCDIVAFNKI 216 The following BLAST results are available for this feature:
BLAST of CN189905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189905 ID=CN189905; Name=CN189905; organism=Citrus sinensis; type=EST; length=296bpback to top |