CN189792
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: AGO4B_ORYSJ (Protein argonaute 4B OS=Oryza sativa subsp. japonica GN=AGO4B PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.273e-60 Identity = 109/130 (83.85%), Postives = 120/130 (92.31%), Query Frame = -2 Query: 351 DNVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFEDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 740 DNVPPGTVV +VCHPRNYDFY+CAHAGMIGT+RPTHYHVL DEIGFS D+LQELVHSLSYVYQRSTTAISVVAPICYAHLAA+QVG+F+KFED+S+ SSSQGG TS G VPVP+LPRL EKV +SMFFC Sbjct: 782 DNVPPGTVVDKQVCHPRNYDFYMCAHAGMIGTTRPTHYHVLHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGTFLKFEDMSDASSSQGGHTSVGSVPVPELPRLHEKVRSSMFFC 911
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: AGO4A_ORYSJ (Protein argonaute 4A OS=Oryza sativa subsp. japonica GN=AGO4A PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.318e-57 Identity = 104/130 (80.00%), Postives = 117/130 (90.00%), Query Frame = -2 Query: 351 DNVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFEDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 740 +NVPPGTVV N VCHPRN DFY+CAHAGMIGT+RPTHYH+L DEIGFS+D+LQELVHSLSYVYQRSTTAISVVAPICYAHLAA+QV F+KF+++SETSSS GG TSAG PVP+LPRL KV +SMFFC Sbjct: 775 NNVPPGTVVDNAVCHPRNNDFYMCAHAGMIGTTRPTHYHILHDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVSQFIKFDEMSETSSSHGGHTSAGSAPVPELPRLHNKVRSSMFFC 904
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: AGO16_ORYSJ (Protein argonaute 16 OS=Oryza sativa subsp. japonica GN=AGO16 PE=2 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 3.475e-50 Identity = 94/130 (72.31%), Postives = 108/130 (83.08%), Query Frame = -2 Query: 351 DNVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFEDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 740 DNVPPGTVV + + HPR YDFY+ AHAG IGTSRPTHYHVL DEIGF D++Q+LV SLSYVYQRSTTAISVVAPICYAHLAA+Q+G FMKFE+ +ETSS GG+ S+ VP+LPRL VC+SMFFC Sbjct: 754 DNVPPGTVVDSGIVHPRQYDFYMYAHAGPIGTSRPTHYHVLLDEIGFLPDDVQKLVLSLSYVYQRSTTAISVVAPICYAHLAAAQMGQFMKFEEFAETSSGSGGVPSSSGAVVPELPRLHADVCSSMFFC 883
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: AGO15_ORYSJ (Protein argonaute 15 OS=Oryza sativa subsp. japonica GN=AGO15 PE=2 SV=2) HSP 1 Score: 185.267 bits (469), Expect = 3.044e-46 Identity = 89/129 (68.99%), Postives = 101/129 (78.29%), Query Frame = -2 Query: 351 NVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFEDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 737 NVPPGTVV +CHPRN DFY+CAHAGMIGT+RPTHYHVL DE F+ D+LQELVH+LSYVYQRSTTAIS VAPICYAHLAA+QV F++ +D + S GG A P PVP+LPRL V SMFFC Sbjct: 764 NVPPGTVVDKGICHPRNCDFYMCAHAGMIGTTRPTHYHVLHDENNFTPDDLQELVHNLSYVYQRSTTAISGVAPICYAHLAAAQVSQFVRLDDAASEGSGDGG---APPRPVPELPRLHPDVRQSMFFC 889
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: MEL1_ORYSJ (Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.280e-32 Identity = 68/132 (51.52%), Postives = 90/132 (68.18%), Query Frame = -2 Query: 351 NVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFE--DLSETSSSQG-GMTSAGPVPVPQLPRLQEKVCNSMFFC 737 N+ PGTVV ++CHP +DFYLC+HAG+ GTSRPTHYHVL+DE F++D LQ L ++L Y Y R T A+SVV P YAHLAA + +++ E D T S G + GPV V QLP+++E V + MF+C Sbjct: 927 NILPGTVVDRQICHPTEFDFYLCSHAGIQGTSRPTHYHVLYDENHFTADALQSLTNNLCYTYARCTRAVSVVPPAYYAHLAAFRARYYVEGESSDGGSTPGSSGQAVAREGPVEVRQLPKIKENVKDVMFYC 1058
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: PNH1_ORYSJ (Protein argonaute PNH1 OS=Oryza sativa subsp. japonica GN=PHN1 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.163e-31 Identity = 63/129 (48.84%), Postives = 87/129 (67.44%), Query Frame = -2 Query: 351 NVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFEDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 737 N+ PGTVV +K+CHP +DFYLC+HAG+ GTSRP HYHVL+DE F++DE+Q L ++L Y Y R T ++SVV P YAHLAA + +M+ ++SE ++ T V LP ++EKV MF+C Sbjct: 852 NILPGTVVDSKICHPSEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYME-PEMSENQTTSKSSTGTNGTSVKPLPAVKEKVKRVMFYC 979
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: AGO1B_ORYSJ (Protein argonaute 1B OS=Oryza sativa subsp. japonica GN=AGO1B PE=2 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 1.373e-30 Identity = 68/141 (48.23%), Postives = 88/141 (62.41%), Query Frame = -2 Query: 351 NVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFEDLSETSSSQGGMTS------------AGPVPVPQLPRLQEKVCNSMFFC 737 N+ PGTVV +K+CHP +DFYLC+HAG+ GTSRP HYHVL+DE F++DELQ L ++L Y Y R T ++S+V P YAHLAA + +M+ E S + G TS AG V V LP L+E V MF+C Sbjct: 978 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARVAGNVAVRPLPALKENVKRVMFYC 1118
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: AGO11_ORYSJ (Protein argonaute 11 OS=Oryza sativa subsp. japonica GN=AGO11 PE=2 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.373e-30 Identity = 64/134 (47.76%), Postives = 87/134 (64.93%), Query Frame = -2 Query: 351 NVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFEDL-----SETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 737 N+ PGTVV K+CHP +DFYLC+H+G+ GTS PTHY+VLFDE FS+D LQ L + L Y Y R T ++S+V P+ YAHLAAS+ +++ L S S++ G + VPV LP ++E V MF+C Sbjct: 759 NILPGTVVDTKICHPSEFDFYLCSHSGIQGTSHPTHYYVLFDENNFSADALQTLTYHLCYTYARCTRSVSIVPPVYYAHLAASRARHYLEEGSLPDHGSSSASAAGGSRRNDRGVPVKPLPEIKENVKQFMFYC 892
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: AGO14_ORYSJ (Protein argonaute 14 OS=Oryza sativa subsp. japonica GN=AGO14 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.518e-29 Identity = 67/133 (50.38%), Postives = 88/133 (66.17%), Query Frame = -2 Query: 351 NVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFEDLSETSS--SQGGMTSAG--PVPVPQLPRLQEKVCNSMFFC 737 NV PGTVV +CHP +DFYLC+HAG+ GTSRPTHYHVL DE FS+D+LQ L ++L Y Y R T ++SVV P YAHLAA + + + + SS S G +AG P V +LP+++E V + MF+C Sbjct: 920 NVRPGTVVDTNICHPSEFDFYLCSHAGIQGTSRPTHYHVLHDENRFSADQLQMLTYNLCYTYARCTRSVSVVPPAYYAHLAAFRARYYDEPPAMDGASSVGSGGNQAAAGGQPPAVRRLPQIKENVKDVMFYC 1052
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: AGO12_ORYSJ (Protein argonaute 12 OS=Oryza sativa subsp. japonica GN=AGO12 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.518e-29 Identity = 63/129 (48.84%), Postives = 83/129 (64.34%), Query Frame = -2 Query: 351 NVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFEDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 737 N+ PGTVV +CHP +DFYLC+H+G+ GTSRPTHYHVL DE GF +D LQ L ++LSY Y R T A+S+V P YAHL A + +M+ E + SSS +T+ LP ++E V MF+C Sbjct: 923 NILPGTVVDTMICHPSEFDFYLCSHSGIKGTSRPTHYHVLLDENGFKADTLQTLTYNLSYTYARCTRAVSIVPPAYYAHLGAFRARYYMEDEHSDQGSSS--SVTTRTDRSTKPLPEIKENVKRFMFYC 1049 The following BLAST results are available for this feature:
BLAST of CN189792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189792 ID=CN189792; Name=CN189792; organism=Citrus sinensis; type=EST; length=741bpback to top |