CN189789

Overview
NameCN189789
Unique NameCN189789
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5998 contig Csv1_Contig5998:183..886. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189789 vs. ExPASy Swiss-Prot
Match: PHSH_VICFA (Alpha-glucan phosphorylase, H isozyme OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 3.618e-86
Identity = 149/196 (76.02%), Postives = 168/196 (85.71%), Query Frame = 1
Query:  115 EPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVG 702
            +P  IASNISYH QY+PHFSP KF+ +QA++ATAESVRDRLIQQWNETY HF+KVDPKQTYYLSMEFLQGR LTNAIG+L+IQ+AYADAL   G  LEEI EQEKD            SCFLDSMATLNLPAWGYGLRYRYGLFKQ ITK+GQEEVAEDWLEKFSPWE+VRHDV++P+RFFG V VNP+G+R+W+G
Sbjct:   29 KPDEIASNISYHAQYTPHFSPFKFQLQQAYYATAESVRDRLIQQWNETYLHFHKVDPKQTYYLSMEFLQGRALTNAIGNLNIQDAYADALRKFGLELEEITEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQIITKEGQEEVAEDWLEKFSPWEIVRHDVLYPIRFFGQVEVNPDGSRQWIG 224          
BLAST of CN189789 vs. ExPASy Swiss-Prot
Match: PHSH_ARATH (Alpha-glucan phosphorylase, H isozyme OS=Arabidopsis thaliana GN=At3g46970 PE=2 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 6.823e-85
Identity = 152/219 (69.41%), Postives = 168/219 (76.71%), Query Frame = 1
Query:   43 AKANGKNEXXXXXXXXXXXXXXXXEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWV 699
            A ANGK                  + + IA NI YH +YSPHFSP KF PEQA +ATAES+RDRLIQ WNETY HFNKVDPKQTYYLSME+LQGR LTNAIG+L++Q  YADAL  LG+ LEEIAEQEKD            SCFLDSMATLNLPAWGYGLRYR+GLFKQ ITK+GQEE+ EDWLEKFSPWE+VRHDVVFPVRFFG V VNP+G+RKWV
Sbjct:    2 ANANGKAATSLPEKISAKANPEADDATEIAGNIVYHAKYSPHFSPLKFGPEQALYATAESLRDRLIQLWNETYVHFNKVDPKQTYYLSMEYLQGRALTNAIGNLNLQGPYADALRTLGYELEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRHGLFKQIITKKGQEEIPEDWLEKFSPWEIVRHDVVFPVRFFGKVQVNPDGSRKWV 220          
BLAST of CN189789 vs. ExPASy Swiss-Prot
Match: PHSH_SOLTU (Alpha-glucan phosphorylase, H isozyme OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 4.423e-84
Identity = 147/197 (74.62%), Postives = 166/197 (84.26%), Query Frame = 1
Query:  115 EPSAIASNISYHVQYSPHFSPTKFEPEQAFFA-TAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVG 702
            +P+ IASNI YH QY+PHFSP KFEP QA++A TA+SVRDRLI+QWN+TY H++KV+PKQTYYLSME+LQGR LTNA+G+LDI NAYADALN LG  LEE+ EQEKD            SCFLDSMATLNLPAWGYGLRYRYGLFKQ ITK GQEEV EDWLEKFSPWE+VRHDVVFP+RFFG V V P+G+RKWVG
Sbjct:   22 DPTDIASNIKYHAQYTPHFSPFKFEPLQAYYAATADSVRDRLIKQWNDTYLHYDKVNPKQTYYLSMEYLQGRALTNAVGNLDIHNAYADALNKLGQQLEEVVEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQLITKAGQEEVPEDWLEKFSPWEIVRHDVVFPIRFFGHVEVLPSGSRKWVG 218          
BLAST of CN189789 vs. ExPASy Swiss-Prot
Match: PHSH_WHEAT (Alpha-glucan phosphorylase, H isozyme OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.140e-82
Identity = 139/196 (70.92%), Postives = 161/196 (82.14%), Query Frame = 1
Query:  115 EPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVG 702
            +PSAIA NISYH QYSPHFSP  F PEQAF+ATAESVRD L+Q+WN+TY HF+K DPKQTYYLSME+LQGR LTNA+G+L I  AYADAL   G+ LE IA QE+D            SCFLDSMATLNLP+WGYGLRYRYGLFKQ+I K+GQEE+AEDWL+KFSPWE+VRHDVV+P+RFFG V ++P+G RKW G
Sbjct:   17 DPSAIAGNISYHAQYSPHFSPLAFGPEQAFYATAESVRDHLLQRWNDTYLHFHKTDPKQTYYLSMEYLQGRALTNAVGNLAITGAYADALKKFGYELEAIAGQERDAALGNGGLGRLASCFLDSMATLNLPSWGYGLRYRYGLFKQRIAKEGQEEIAEDWLDKFSPWEIVRHDVVYPIRFFGHVEISPDGKRKWAG 212          
BLAST of CN189789 vs. ExPASy Swiss-Prot
Match: PHSL_IPOBA (Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 3.184e-66
Identity = 115/196 (58.67%), Postives = 147/196 (75.00%), Query Frame = 1
Query:  115 EPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVG 702
            + ++IAS+I YH ++SP FSP +FE  +A+FATA+SVRD LI  WN TY ++ K++ KQ YYLSMEFLQGR L NAIG+L++   YA+ALN LGH LE +A +E D            SCFLDS+ATLN PAWGYGLRY+YGLFKQ+ITK GQEEVAEDWLE  +PWE++R DV +PV+FFG V+   +G + W+G
Sbjct:   68 DAASIASSIKYHAEFSPAFSPERFELPKAYFATAQSVRDALIVNWNATYDYYEKLNMKQAYYLSMEFLQGRALLNAIGNLELTGEYAEALNKLGHNLENVASKEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIIRMDVSYPVKFFGKVITGSDGKKHWIG 263          
BLAST of CN189789 vs. ExPASy Swiss-Prot
Match: PHSL1_SOLTU (Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 249.595 bits (636), Expect = 1.210e-65
Identity = 116/196 (59.18%), Postives = 146/196 (74.49%), Query Frame = 1
Query:  115 EPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVG 702
            + ++I S+I YH +++P FSP +FE  +AFFATA+SVRD L+  WN TY  + K++ KQ YYLSMEFLQGR L NAIG+L++  A+A+AL NLGH LE +A QE D            SCFLDS+ATLN PAWGYGLRY+YGLFKQ+ITK GQEEVAEDWLE  SPWEVVR+DV +P++F+G V    +G R W+G
Sbjct:   75 DAASITSSIKYHAEFTPVFSPERFELPKAFFATAQSVRDSLLINWNATYDIYEKLNMKQAYYLSMEFLQGRALLNAIGNLELTGAFAEALKNLGHNLENVASQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLEIGSPWEVVRNDVSYPIKFYGKVSTGSDGKRYWIG 270          
BLAST of CN189789 vs. ExPASy Swiss-Prot
Match: PHSL_VICFA (Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Vicia faba GN=PHO1 PE=2 SV=2)

HSP 1 Score: 247.284 bits (630), Expect = 6.005e-65
Identity = 115/196 (58.67%), Postives = 146/196 (74.49%), Query Frame = 1
Query:  115 EPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVG 702
            + ++I S+I YH +++P FSP KFE  QAF ATA+SVRD LI  WN TY ++ K++ KQ YYLSMEFLQGR L NAIG+L++   YA+AL+ L + LE++A QE D            SCFLDS+ATLN PAWGYGLRY+YGLFKQ+ITK GQEEVAEDWLE  +PWE+VR+DV +PVRF+G V+   +G + WVG
Sbjct:   93 DTTSIVSSIKYHAEFTPLFSPEKFELPQAFIATAQSVRDALIINWNATYDYYEKLNVKQAYYLSMEFLQGRALLNAIGNLELTGPYAEALSQLSYKLEDVAHQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLEMGNPWEIVRNDVSYPVRFYGKVVSGSDGKKHWVG 288          
BLAST of CN189789 vs. ExPASy Swiss-Prot
Match: PHSL2_SOLTU (Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum GN=STP-1 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.672e-64
Identity = 112/196 (57.14%), Postives = 144/196 (73.47%), Query Frame = 1
Query:  115 EPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVG 702
            + +++ S+I YH +++P FSP KFE  +A++ATAESVRD LI  WN TY  + K++ KQ YYLSMEFLQGR L NAIG+L +   YADAL  LG+ LE++A QE D            SCFLDSMATLN PAWGYGLRY+YGLFKQ ITK GQEEVAE+WLE  +PWE+VR+D+ +PV+F+G V+   +G ++W G
Sbjct:   78 DSTSVLSSIKYHAEFTPSFSPEKFELPKAYYATAESVRDTLIINWNATYEFYEKMNVKQAYYLSMEFLQGRALLNAIGNLGLTGPYADALTKLGYSLEDVARQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYQYGLFKQLITKDGQEEVAENWLEMGNPWEIVRNDISYPVKFYGKVIEGADGRKEWAG 273          
BLAST of CN189789 vs. ExPASy Swiss-Prot
Match: PHS1_DICDI (Glycogen phosphorylase 1 OS=Dictyostelium discoideum GN=glpV PE=1 SV=3)

HSP 1 Score: 169.859 bits (429), Expect = 1.218e-41
Identity = 83/184 (45.11%), Postives = 120/184 (65.22%), Query Frame = 1
Query:  115 EPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 666
            +  +I  +I  HV+Y+   +   F+   A+  +A SVRDRLI++WNET  ++ + DPK+ YYLSMEFL GR+L NAI ++++++ Y +AL  LG  +E++ E+EKD            +CF+DS+ATL  PAWGYGLRY YG+F+Q I    Q EV + WL   +PWE+ R DV + VRF+G V
Sbjct:   40 DEDSIQKDILDHVEYTLARTKYNFDSFSAYQGSAYSVRDRLIERWNETQQYYTERDPKRVYYLSMEFLMGRSLQNAIYNMNLKDEYHNALLELGFEMEDLYEEEKDAALGNGGLGRLAACFMDSLATLKYPAWGYGLRYNYGMFEQGIYDGYQTEVPDYWLVAGNPWEIERLDVQYTVRFYGQV 223          
BLAST of CN189789 vs. ExPASy Swiss-Prot
Match: PYGB_HUMAN (Glycogen phosphorylase, brain form OS=Homo sapiens GN=PYGB PE=1 SV=5)

HSP 1 Score: 158.303 bits (399), Expect = 3.669e-38
Identity = 79/170 (46.47%), Postives = 105/170 (61.76%), Query Frame = 1
Query:  190 PEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDXXXXXXXXXXXXSCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWV 699
            P   FFA A +VRD L+ +W  T  H+ + DPK+ YYLS+EF  GRTL N + +L +QNA  +A+  LG  LEE+ E E+D            +CFLDSMATL L A+GYG+RY +G+F QKI    Q E A+DWL   +PWE  R + + PV F+G V   P+G  KW+
Sbjct:   49 PRDYFFALAHTVRDHLVGRWIRTQQHYYERDPKRIYYLSLEFYMGRTLQNTMVNLGLQNACDEAIYQLGLDLEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEADDWLRYGNPWEKARPEYMLPVHFYGRVEHTPDGV-KWL 217          
The following BLAST results are available for this feature:
BLAST of CN189789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
PHSH_VICFA3.618e-8676.02Alpha-glucan phosphorylase, H isozyme OS=Vicia fab... [more]
PHSH_ARATH6.823e-8569.41Alpha-glucan phosphorylase, H isozyme OS=Arabidops... [more]
PHSH_SOLTU4.423e-8474.62Alpha-glucan phosphorylase, H isozyme OS=Solanum t... [more]
PHSH_WHEAT4.140e-8270.92Alpha-glucan phosphorylase, H isozyme OS=Triticum ... [more]
PHSL_IPOBA3.184e-6658.67Alpha-1,4 glucan phosphorylase L isozyme, chloropl... [more]
PHSL1_SOLTU1.210e-6559.18Alpha-1,4 glucan phosphorylase L-1 isozyme, chloro... [more]
PHSL_VICFA6.005e-6558.67Alpha-1,4 glucan phosphorylase L isozyme, chloropl... [more]
PHSL2_SOLTU8.672e-6457.14Alpha-1,4 glucan phosphorylase L-2 isozyme, chloro... [more]
PHS1_DICDI1.218e-4145.11Glycogen phosphorylase 1 OS=Dictyostelium discoide... [more]
PYGB_HUMAN3.669e-3846.47Glycogen phosphorylase, brain form OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002G19_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002G19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189789 ID=CN189789; Name=CN189789; organism=Citrus sinensis; type=EST; length=704bp
GAGGCTGAAACAAGCAATAATTTGTGGAATCAAATGGCGGATGCGAAAGC
AAACGGAAAGAATGAGGCGGCCAAACTGGCGAAAATTCCGGCGGCTGCGA
ATCCATTGGCTAATGAACCATCGGCGATTGCATCAAATATAAGTTACCAC
GTGCAGTACAGTCCTCATTTCTCGCCGACTAAGTTCGAGCCGGAGCAAGC
TTTCTTTGCCACGGCGGAGAGTGTCCGCGATCGTCTTATTCAACAATGGA
ATGAGACATACCACCATTTTAATAAAGTTGATCCGAAGCAAACATACTAC
CTATCAATGGAATTTCTTCAAGGAAGGACTTTGACTAATGCAATTGGCAG
TTTGGACATTCAGAATGCATATGCTGATGCTTTAAATAATTTGGGGCATG
TCCTTGAGGAGATAGCTGAACAGGAAAAAGATGCTGCACTAGGAAATGGT
GGGCTGGGCAGGCTAGCTTCATGCTTCTTAGACTCCATGGCAACATTGAA
TTTGCCTGCATGGGGTTATGGTTTGAGATACCGGTATGGGCTGTTCAAGC
AGAAGATCACCAAGCAGGGTCAAGAAGAAGTTGCTGAAGATTGGCTTGAG
AAATTTAGTCCTTGGGAAGTTGTCAGGCATGATGTGGTATTTCCGGTCAG
ATTTTTTGGGAGTGTTATGGTTAATCCAAATGGAACGAGAAAATGGGTTG
GGGG
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