CN189788 | Citrus Genome Database

Overview


Name	CN189788
Unique Name	CN189788
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	786

Libraries


Library Name	Type
Washington Navel Orange Stored Fruit Rind cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig9095	contig	Csv1_Contig9095:36..822.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CN189788 vs. ExPASy Swiss-Prot
Match: ENO_RICCO (Enolase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 4.605e-84
Identity = 152/161 (94.41%), Postives = 157/161 (97.52%), Query Frame = -2

Query:  258 KDLYKSFISDYLIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 740
            KDLYKSF S+Y IVSIEDPFDQDDWEHY+KLTSE+GEKVQIVGDDLLVTNPKRVEKAI+EK CNALLLKVNQIGSVTESIEAVRMSK+AGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFR PVEPY
Sbjct:  285 KDLYKSFASEYPIVSIEDPFDQDDWEHYSKLTSEIGEKVQIVGDDLLVTNPKRVEKAIQEKACNALLLKVNQIGSVTESIEAVRMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRTPVEPY 445

HSP 2 Score: 26.9498 bits (58), Expect = 4.605e-84
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = -1

Query:  739 KRTNDGSQKISGDALQ 786
            +  NDGSQKISG+AL+
Sbjct:  270 EENNDGSQKISGEALK 285

[Close]

BLAST of CN189788 vs. ExPASy Swiss-Prot
Match: ENO2_HEVBR (Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.117e-82
Identity = 150/161 (93.17%), Postives = 156/161 (96.89%), Query Frame = -2

Query:  258 KDLYKSFISDYLIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 740
            KDLYKSF+++Y IVSIEDPFDQDDWEHYAKLTSE+G KVQIVGDDLLVTNPKRVEKAIKEK CNALLLKVNQIGSVTESIEAV+MSK+AGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGA FR PVEPY
Sbjct:  285 KDLYKSFVTEYPIVSIEDPFDQDDWEHYAKLTSEIGVKVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGANFRTPVEPY 445

HSP 2 Score: 25.0238 bits (53), Expect = 1.117e-82
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = -1

Query:  739 KRTNDGSQKISGDALQ 786
            +  N+GSQKISGD L+
Sbjct:  270 EENNNGSQKISGDVLK 285

[Close]

BLAST of CN189788 vs. ExPASy Swiss-Prot
Match: ENO1_HEVBR (Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.480e-82
Identity = 149/161 (92.55%), Postives = 156/161 (96.89%), Query Frame = -2

Query:  258 KDLYKSFISDYLIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 740
            KDLYKSF+++Y IVSIEDPFDQDDW HYAKLTSE+GEKVQIVGDDLLVTNPKRVEKAIKEK CNALLLKVNQIGSVTESIEAV+MSK+AGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  285 KDLYKSFVAEYPIVSIEDPFDQDDWAHYAKLTSEIGEKVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGANFRKPVEPY 445

HSP 2 Score: 25.0238 bits (53), Expect = 2.480e-82
Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = -1

Query:  739 KRTNDGSQKISGDALQ 786
            +  N+GSQKISG+AL+
Sbjct:  270 EENNNGSQKISGEALK 285

[Close]

BLAST of CN189788 vs. ExPASy Swiss-Prot
Match: ENO_ORYSJ (Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE=1 SV=2)

HSP 1 Score: 293.123 bits (749), Expect = 2.270e-80
Identity = 143/161 (88.82%), Postives = 156/161 (96.89%), Query Frame = -2

Query:  258 KDLYKSFISDYLIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 740
            K++YKSF+S+Y IVSIEDPFDQDDWEHYAK+T+E+GE+VQIVGDDLLVTNP RV KAI+EK+CNALLLKVNQIGSVTESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+VGLATGQIKTGAPCRSERLAKYNQLLRIEEELGA AVYAGAKFRAPVEPY
Sbjct:  286 KNVYKSFVSEYPIVSIEDPFDQDDWEHYAKMTAEIGEQVQIVGDDLLVTNPTRVAKAIQEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAAAVYAGAKFRAPVEPY 446

HSP 2 Score: 27.335 bits (59), Expect = 2.270e-80
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = -1

Query:  739 KRTNDGSQKISGDALQ 786
            +  NDGSQKISGD+L+
Sbjct:  271 EENNDGSQKISGDSLK 286

[Close]

BLAST of CN189788 vs. ExPASy Swiss-Prot
Match: ENO_ALNGL (Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 2.962e-80
Identity = 147/161 (91.30%), Postives = 155/161 (96.27%), Query Frame = -2

Query:  258 KDLYKSFISDYLIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 740
            KDLYKSF+ +Y IVSIEDPFDQDDWEHY+KLT+E+GEKVQIVGDDLLVTNPKRVEKAIKEK CNALLLKVNQIGSVTESIEAV+MSK+AGWGVMA HRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  281 KDLYKSFVDEYPIVSIEDPFDQDDWEHYSKLTAEIGEKVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQIGSVTESIEAVKMSKRAGWGVMA-HRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGANFRTPVEPY 440

HSP 2 Score: 24.2534 bits (51), Expect = 2.962e-80
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = -1

Query:  739 KRTNDGSQKISGDALQ 786
            +  NDGSQKIS D L+
Sbjct:  266 EENNDGSQKISADQLK 281

[Close]

BLAST of CN189788 vs. ExPASy Swiss-Prot
Match: ENO_SOLLC (Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 5.038e-80
Identity = 144/161 (89.44%), Postives = 154/161 (95.65%), Query Frame = -2

Query:  258 KDLYKSFISDYLIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 740
            KDLYKSF+S+Y IVSIEDPFDQDDWE YAKLT+E+GE+VQIVGDDLLVTNPKRV KAI EKTCNALLLKVNQIGSVTESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+VGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  284 KDLYKSFVSEYPIVSIEDPFDQDDWETYAKLTAEIGEQVQIVGDDLLVTNPKRVAKAIAEKTCNALLLKVNQIGSVTESIEAVKMSKKAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGASFRKPVEPY 444

HSP 2 Score: 26.9498 bits (58), Expect = 5.038e-80
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = -1

Query:  739 KRTNDGSQKISGDALQ 786
            + +NDGSQKISGD L+
Sbjct:  269 EESNDGSQKISGDQLK 284

[Close]

BLAST of CN189788 vs. ExPASy Swiss-Prot
Match: ENO2_MAIZE (Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 2.481e-79
Identity = 142/161 (88.20%), Postives = 154/161 (95.65%), Query Frame = -2

Query:  258 KDLYKSFISDYLIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 740
            K++YKSF+S+Y IVSIEDPFDQDDW HYAK+T E+GE+VQIVGDDLLVTNP RV KAIKEK+CNALLLKVNQIGSVTESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+VGL+TGQIKTGAPCRSERLAKYNQLLRIEEELGA AVYAGAKFRAPVEPY
Sbjct:  286 KNVYKSFVSEYPIVSIEDPFDQDDWVHYAKMTEEIGEQVQIVGDDLLVTNPTRVAKAIKEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGAIAVYAGAKFRAPVEPY 446

HSP 2 Score: 27.335 bits (59), Expect = 2.481e-79
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = -1

Query:  739 KRTNDGSQKISGDALQ 786
            +  NDGSQKISGD+L+
Sbjct:  271 EENNDGSQKISGDSLK 286

[Close]

BLAST of CN189788 vs. ExPASy Swiss-Prot
Match: ENO_MESCR (Enolase OS=Mesembryanthemum crystallinum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 3.236e-79
Identity = 143/161 (88.82%), Postives = 153/161 (95.03%), Query Frame = -2

Query:  258 KDLYKSFISDYLIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 740
            KDLYKSF+++Y IVSIEDPFDQDDWEHYAK+T+E GEKVQIVGDDLLVTNPKRV+KAI E  CNALLLKVNQIGSVTESIEAV+MSK+AGWGVMASHRSGETEDTFIADLSVGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG +AVYAGA FR PVEPY
Sbjct:  284 KDLYKSFVAEYPIVSIEDPFDQDDWEHYAKMTAECGEKVQIVGDDLLVTNPKRVKKAIDENPCNALLLKVNQIGSVTESIEAVKMSKKAGWGVMASHRSGETEDTFIADLSVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYAGANFRRPVEPY 444

HSP 2 Score: 25.7942 bits (55), Expect = 3.236e-79
Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = -1

Query:  739 KRTNDGSQKISGDALQ 786
            +  NDGSQ+ISG+AL+
Sbjct:  269 EENNDGSQRISGEALK 284

[Close]

BLAST of CN189788 vs. ExPASy Swiss-Prot
Match: ENO1_MAIZE (Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 5.504e-79
Identity = 145/161 (90.06%), Postives = 151/161 (93.79%), Query Frame = -2

Query:  258 KDLYKSFISDYLIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 740
            KDLYKSF+S+Y I SIEDPFDQDDW  YAKLT E+G+KVQIVGDDLLVTNP RV KAI EKTCNALLLKVNQIGSVTESIEAVRMSK+AGWGVMASHRSGETEDTFIADLSVGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG  AVYAGAKFRAPVEPY
Sbjct:  286 KDLYKSFVSEYPIESIEDPFDQDDWSTYAKLTDEIGQKVQIVGDDLLVTNPTRVAKAINEKTCNALLLKVNQIGSVTESIEAVRMSKRAGWGVMASHRSGETEDTFIADLSVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGDAAVYAGAKFRAPVEPY 446

HSP 2 Score: 25.409 bits (54), Expect = 5.504e-79
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = -1

Query:  739 KRTNDGSQKISGDALQ 786
            +  NDGS KISGD+L+
Sbjct:  271 EENNDGSNKISGDSLK 286

[Close]

BLAST of CN189788 vs. ExPASy Swiss-Prot
Match: ENO_ARATH (Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 2.710e-78
Identity = 139/161 (86.34%), Postives = 152/161 (94.41%), Query Frame = -2

Query:  258 KDLYKSFISDYLIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 740
            KDLYKSF+++Y IVSIEDPFDQDDWEHYAK+T+E G +VQIVGDDLLVTNPKRV KAI EK+CNALLLKVNQIGSVTESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+VGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG+EA+YAG  FR PVEPY
Sbjct:  284 KDLYKSFVAEYPIVSIEDPFDQDDWEHYAKMTTECGTEVQIVGDDLLVTNPKRVAKAIAEKSCNALLLKVNQIGSVTESIEAVKMSKKAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGSEAIYAGVNFRKPVEPY 444

HSP 2 Score: 26.5646 bits (57), Expect = 2.710e-78
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = -1

Query:  739 KRTNDGSQKISGDALQ 786
            +  N+GSQKISGDAL+
Sbjct:  269 EENNNGSQKISGDALK 284

The following BLAST results are available for this feature:

BLAST of CN189788 vs. ExPASy Swiss-Prot

BLAST of CN189788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_RICCO	4.605e-84	94.41	Enolase OS=Ricinus communis PE=2 SV=1	[more]
ENO2_HEVBR	1.117e-82	93.17	Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1	[more]
ENO1_HEVBR	2.480e-82	92.55	Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1	[more]
ENO_ORYSJ	2.270e-80	88.82	Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE...	[more]
ENO_ALNGL	2.962e-80	91.30	Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1	[more]
ENO_SOLLC	5.038e-80	89.44	Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1	[more]
ENO2_MAIZE	2.481e-79	88.20	Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1	[more]
ENO_MESCR	3.236e-79	88.82	Enolase OS=Mesembryanthemum crystallinum GN=PGH1 P...	[more]
ENO1_MAIZE	5.504e-79	90.06	Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1	[more]
ENO_ARATH	2.710e-78	86.34	Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1	[more]

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Properties


Property Name	Value
Genbank description	UCRCS06_0002G19_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002G19, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CN189788 ID=CN189788; Name=CN189788; organism=Citrus sinensis; type=EST; length=786bp
CCCCCCCTGAATTCTAATAAGAAAGAACAATGCCTTAGCACCGCAACTAG
ATACTCACTTTAATAAAACATGCTCTAGGAAATGGTTCCTCATACAGCAC
ATGTTCAAGCTCTCAGACAAAAACTGTGTCAAAATTATTGAGGAAATATC
TTGGGTCACAAAATGCTAAAAACCCATAAAAATCCATTTTACATAACTTA
TTGAAGTACTCCATTGCTCAAATCCAGCACCACACCAGATCAGCATCTCA
AACTCTAGTAGGGTTCAACAGGGGCACGGAACTTGGCACCAGCATAAACT
GCTTCAGCACCGAGCTCTTCTTCAATTCTCAGAAGCTGATTATACTTTGC
AAGGCGCTCTGACCTGCATGGTGCTCCTGTCTTAATTTGACCCGTGGCCA
AGCCCACTGAGAGATCGGCAATGAAAGTATCTTCAGTCTCACCACTGCGG
TGGCTGGCCATCACACCCCACCCAGCTTGCTTGGACATTCTGACGGCTTC
AATGCTCTCAGTTACAGATCCAATTTGATTAACCTTGAGAAGGAGGGCGT
TGCAGGTCTTCTCTTTGATAGCCTTCTCAACCCTCTTAGGATTGGTGACC
AAAAGATCATCTCCAACAATTTGTACTTTTTCTCCGACCTCACTGGTTAG
CTTGGCATAGTGCTCCCAGTCGTCTTGGTCAAATGGATCTTCAATTGATA
CAATAAGATAATCAGAGATGAATGACTTATAGAGATCTTTGAAGTGCATC
TCCTGAAATCTTTTGTGAACCATCATTTGTTCTCTT