CN189767

Overview
NameCN189767
Unique NameCN189767
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189767 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.253e-18
Identity = 39/43 (90.70%), Postives = 40/43 (93.02%), Query Frame = 1
Query:  556 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSI 684
            MS + GKY DELIKNAAYIGTPGKGILAADESTGTIGKRLSSI
Sbjct:    1 MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRLSSI 43          

HSP 2 Score: 35.039 bits (79), Expect = 1.253e-18
Identity = 16/19 (84.21%), Postives = 17/19 (89.47%), Query Frame = 2
Query:  680 AFNVENVESNRRALRELLF 736
            + NVENVE NRRALRELLF
Sbjct:   42 SINVENVEENRRALRELLF 60          
BLAST of CN189767 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.657e-18
Identity = 39/43 (90.70%), Postives = 39/43 (90.70%), Query Frame = 1
Query:  556 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSI 684
            MS FK KY DELI NAAYIGTPGKGILAADESTGTIGKRLSSI
Sbjct:    1 MSHFKSKYHDELIANAAYIGTPGKGILAADESTGTIGKRLSSI 43          

HSP 2 Score: 35.039 bits (79), Expect = 4.657e-18
Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = 2
Query:  680 AFNVENVESNRRALRELLF 736
            + NVENVESNR+ALRELLF
Sbjct:   42 SINVENVESNRQALRELLF 60          
BLAST of CN189767 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.872e-18
Identity = 38/43 (88.37%), Postives = 39/43 (90.70%), Query Frame = 1
Query:  556 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSI 684
            MS FK KY DELI NAAYIGTPGKGILAADESTGTIGKRL+SI
Sbjct:    1 MSNFKSKYHDELIANAAYIGTPGKGILAADESTGTIGKRLASI 43          

HSP 2 Score: 35.4242 bits (80), Expect = 7.872e-18
Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = 2
Query:  680 AFNVENVESNRRALRELLF 736
            + NVENVE+NRRALRELLF
Sbjct:   42 SINVENVETNRRALRELLF 60          
BLAST of CN189767 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.024e-17
Identity = 37/43 (86.05%), Postives = 39/43 (90.70%), Query Frame = 1
Query:  556 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSI 684
            MS + GKY DELIKNAAYIGTPGKGILAADESTGTIGKR +SI
Sbjct:    1 MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASI 43          

HSP 2 Score: 34.6538 bits (78), Expect = 1.024e-17
Identity = 15/21 (71.43%), Postives = 18/21 (85.71%), Query Frame = 2
Query:  674 YPAFNVENVESNRRALRELLF 736
            + + NVENVE NRR+LRELLF
Sbjct:   40 FASINVENVEENRRSLRELLF 60          
BLAST of CN189767 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.331e-17
Identity = 38/43 (88.37%), Postives = 39/43 (90.70%), Query Frame = 1
Query:  556 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSI 684
            MS F GKYADELIKNA YI TPGKGILAADESTGTIGKRL+SI
Sbjct:    1 MSAFVGKYADELIKNAKYIATPGKGILAADESTGTIGKRLASI 43          

HSP 2 Score: 33.4982 bits (75), Expect = 1.331e-17
Identity = 14/19 (73.68%), Postives = 18/19 (94.74%), Query Frame = 2
Query:  680 AFNVENVESNRRALRELLF 736
            + NVEN+E+NR+ALRELLF
Sbjct:   42 SINVENIEANRQALRELLF 60          
BLAST of CN189767 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.924e-17
Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = 1
Query:  556 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSI 684
            M+ ++GKYADELI NA+YI TPGK ILAADESTGTIGKR  SI
Sbjct:    1 MTAYRGKYADELIANASYIATPGKVILAADESTGTIGKRFPSI 43          

HSP 2 Score: 40.4318 bits (93), Expect = 2.924e-17
Identity = 18/21 (85.71%), Postives = 20/21 (95.24%), Query Frame = 2
Query:  674 YPAFNVENVESNRRALRELLF 736
            +P+ NVENVESNRRALRELLF
Sbjct:   40 FPSINVENVESNRRALRELLF 60          
BLAST of CN189767 vs. ExPASy Swiss-Prot
Match: NLTP_PRUAV (Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.480e-16
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = -2
Query:  224 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDIC 442
            +TC QV+  L PCI+Y   GGAV PACC+GIR +N  +KTT DR+T CNC+K+ +A +PG+N +    LP  C
Sbjct:   27 LTCGQVSSNLAPCIAYVRGGGAVPPACCNGIRNINNLAKTTADRQTACNCLKQLSASVPGVNANNAAALPGKC 99          
BLAST of CN189767 vs. ExPASy Swiss-Prot
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.758e-15
Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = -2
Query:  224 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDIC 442
            ITC QVT  L PCI Y   GGAV PACC+GIR +N  ++TT DR+T CNC+K  A  I G+N +    LP  C
Sbjct:   25 ITCGQVTSSLAPCIGYVRSGGAVPPACCNGIRTINGLARTTADRQTACNCLKNLAGSISGVNPNNAAGLPGKC 97          
BLAST of CN189767 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDO (Non-specific lipid-transfer protein 1 OS=Prunus domestica PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15
Identity = 38/73 (52.05%), Postives = 49/73 (67.12%), Query Frame = -2
Query:  224 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDIC 442
            ITC QV+  L PCI+Y   GGAV PACC+GIR +N  ++TT DRR  CNC+K+ +  IPG+N +    LP  C
Sbjct:    1 ITCGQVSSNLAPCINYVKGGGAVPPACCNGIRNVNNLARTTADRRAACNCLKQLSGSIPGVNPNNAAALPGKC 73          
BLAST of CN189767 vs. ExPASy Swiss-Prot
Match: NLTP_PYRCO (Non-specific lipid-transfer protein OS=Pyrus communis PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.025e-15
Identity = 36/73 (49.32%), Postives = 47/73 (64.38%), Query Frame = -2
Query:  224 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDIC 442
            ITC QV+  L PCI+Y   GGAV PACC+GI+ +N  +KTT DR+  CNC+K  A  + G+N     +LP  C
Sbjct:   25 ITCSQVSANLAPCINYVRSGGAVPPACCNGIKTINGLAKTTPDRQAACNCLKNLAGSVSGVNPGNAESLPGKC 97          
The following BLAST results are available for this feature:
BLAST of CN189767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
ALF_MAIZE1.253e-1890.70Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_PEA4.657e-1890.70Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_CICAR7.872e-1888.37Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ORYSJ1.024e-1786.05Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALF1_PEA1.331e-1788.37Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_SPIOL2.924e-1776.74Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
NLTP_PRUAV9.480e-1652.05Non-specific lipid-transfer protein OS=Prunus aviu... [more]
NLTP_MALDO2.758e-1553.42Non-specific lipid-transfer protein OS=Malus domes... [more]
NLTP1_PRUDO4.705e-1552.05Non-specific lipid-transfer protein 1 OS=Prunus do... [more]
NLTP_PYRCO8.025e-1549.32Non-specific lipid-transfer protein OS=Pyrus commu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002G07_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189767 ID=CN189767; Name=CN189767; organism=Citrus sinensis; type=EST; length=737bp
GAGGTGTTTACATTGCAACACATATCATTAGAATGACTTGTATAATAATG
TAAAATGCAAAATGCCAATAAAATATCTCAGGCTTTATTTTAGAGTAATA
GAAGATATTTTTAGGACAATAAGCCAAAAGTAGCAGCCTTATTCTCTTTG
TAGACTTCATTCGTGACTTATCAATAAACCAGATACCCCCGCCCGTGCAA
ACTGCAGATTTAGTTCACCTCCGACAAATATCAGGAAGCGTATTAACACG
ATCATAGTTGAGACCAGGGATCCTAGCAGCACCTTCCTTCACACAATTAC
ATTGGGTCCTTCTATCTTCTGTGGTTTTTGAAGCAGCATTCAAAGCTCTA
ATGCCATCACAACAAGCTGGTTGAACAGCCCCACCCAATACGCCATAGCT
GATGCATGGTGTCAGCCAGATTGTCACTTGCTCACATGTTATTGTTGTTG
CTGCATTCAGGGGAGCCAACAATAACAACAACATTGTTGCAATAGACACT
GTTAATGGCACTCTCCCTCTAACAAAACAAATTTTCTATCTTCAAGTCGA
TCACCATGTCTTGCTTCAAGGGCAAATACGCCGATGAGCTCATTAAAAAT
GCTGCCTACATTGGCACCCCTGGAAAGGGTATCCTTGCTGCTGATGAGTC
AACAGGCACCATTGGCAAGCGTCTATCCAGCATTCAATGTTGAGAATGTT
GAGTCAAACAGGCGTGCTCTCCGCGAGCTCCTTTTCT
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