CN189759
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189759 vs. ExPASy Swiss-Prot
Match: PAO_ARATH (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 4.304e-68 Identity = 128/199 (64.32%), Postives = 142/199 (71.36%), Query Frame = 1 Query: 13 KTLPFFATGTPKRQITVKSLQKRSKNL-SPLRVXXXXXXXXXXXEETVRKDEKEDYGSLVDDEYG--KESSDSKFSWRDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRACATRFPTMGSQGLLFVWPDEYG 600 K +PF + T K + V RSK +PLRV E R +++EYG KE S+F WRDHWYPVSLVEDLDPN+PT FQLLGRDLVLWFD N KW AFDD CPHRLAPLSEGR+DENGHLQCSYHGWSF GCGSCTRIPQAA+ GPEARA++SPRACA +FPTM SQGLLFVWPDE G Sbjct: 19 KKIPFLSP-TTKFPLKVSISPSRSKLFHNPLRVAAPPSVPTSDSTEEKR----------IEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKSPRACAIKFPTMVSQGLLFVWPDENG 206
BLAST of CN189759 vs. ExPASy Swiss-Prot
Match: CAO_DUNSA (Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina GN=CAO PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.006e-16 Identity = 45/124 (36.29%), Postives = 61/124 (49.19%), Query Frame = 1 Query: 235 RDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRAC----ATRFPTMGSQGLLFVWPDE 594 R+ WYP + L+P + F L G VL+ D +S D C HR PLS G++ NGH+QC YHGW FDG G+CT++P S R C P + G ++VWP + Sbjct: 131 RNFWYPTEFAKKLEPGMMVPFDLFGVPWVLFRDEHSAP-TCIKDSCAHRACPLSLGKVI-NGHVQCPYHGWEFDGSGACTKMP-------------STRMCHGVGVAALPCVEKDGFVWVWPGD 239
BLAST of CN189759 vs. ExPASy Swiss-Prot
Match: CAO_CHLRE (Chlorophyllide a oxygenase, chloroplastic OS=Chlamydomonas reinhardtii GN=CAO PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.662e-11 Identity = 42/132 (31.82%), Postives = 61/132 (46.21%), Query Frame = 1 Query: 202 GKESS-DSKFSWRDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRACATRFPTMGSQGLLFVWPDE 594 G ESS + + R+ WYP L + F+L G V++ D D+C HR PLS G++ E G + C YHGW F+G G+CT++P P R + P G ++VWP + Sbjct: 290 GLESSMEIEEGLRNFWYPAEFSARLPKDTLVPFELFGEPWVMFRDEKGQP-SCIRDECAHRGCPLSLGKVVE-GQVMCPYHGWEFNGDGACTKMPST----PFCRNVG-----VAALPCAEKDGFIWVWPGD 410 The following BLAST results are available for this feature:
BLAST of CN189759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189759 ID=CN189759; Name=CN189759; organism=Citrus sinensis; type=EST; length=600bpback to top |