CN189709
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189709 vs. ExPASy Swiss-Prot
Match: SERC3_PONAB (Serine incorporator 3 OS=Pongo abelii GN=SERINC3 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 60/209 (28.71%), Postives = 97/209 (46.41%), Query Frame = 3 Query: 123 RIAYCGLFALSLIVSWIL-REVAAPLMEKLPWINH----FHKTPSREWFETD------AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLP-NEIVSFYESISKFGSGXXXXXXXXXXXXXXHRWNDTWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFT-PSGQDCGLHTFFIVMTL 698 R+ Y + LS +VS+I+ R+ ++K+P H+ + D AV R+S +FF + S+LM VK KDPR ++H+G W KI +++ F++P S + + G+ H WN++WV E+ WY ALL + Y+L+ GLL+ ++T P G C + FFI + L Sbjct: 39 RLIYAFILLLSTVVSYIMQRKEMETYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDPRAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLVDFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDG--CTENKFFISINL 245
BLAST of CN189709 vs. ExPASy Swiss-Prot
Match: SERC3_BOVIN (Serine incorporator 3 OS=Bos taurus GN=SERINC3 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.286e-15 Identity = 50/151 (33.11%), Postives = 77/151 (50.99%), Query Frame = 3 Query: 264 AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLP-NEIVSFYESISKFGSGXXXXXXXXXXXXXXHRWNDTWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFT-PSGQDCGLHTFFIVMTL 698 AV R+S +FF S+LM+ VK KDPR ++H+G W KI +++ F++P + + I G+ H WN++WV E+ WY ALL V+ + Y+L+ F+GLL+ ++T P G C + FFI L Sbjct: 96 AVYRISFALAVFFFAFSLLMLNVKTSKDPRAAIHNGFWFFKIAAIVGVMVGSFYIPGGHFNTAWFVIGMVGAAFFILIQLVLLVDFAHSWNESWVNRMEEGNPKCWYAALLSVTSLFYILSIIFAGLLYTYYTKPDG--CTENKFFISFNL 244
BLAST of CN189709 vs. ExPASy Swiss-Prot
Match: SERIC_MONBE (Probable serine incorporator OS=Monosiga brevicollis GN=serinc PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14 Identity = 64/220 (29.09%), Postives = 97/220 (44.09%), Query Frame = 3 Query: 117 SARIAYCGLFALSLIVSWIL--REVAAPLMEKLPWINHFHKTPSR----------------EWFETDAVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLPNE--IVSFYESISKFGSGXXXXXXXXXXXXXXHRWNDTWVGYDEQ------FWYVALLVVSLVCYVLTFGFSGLLFHWFTPSGQDCGLHTFFIVMTL 698 S RI Y LF LS I +WI+ ++V+ LM+ + +H T R W E V+R+ LF LS+ +GV + KDPR SLH+G W +K+I ++ FF+ N I + + I G+ + WND+WVG E+ F L+ +++ + L+FH++T DC L FFI L Sbjct: 43 STRITYAILFFLSSIAAWIMLDKDVSKGLMK----VCCYHSTLFRLVLFTQPAIKTTTNVVPWGEL-GVMRIMFSVCLFHLFLSLCTIGVSSSKDPRSSLHNGMWFIKLILLVGAMVGSFFISNSFFIGASWSWIGLVGAVLFMIVQFILLVDFAYSWNDSWVGKLEEGSKCAGFGSYRLISATVMLMAFVITLTVLMFHFYT--NGDCKLSNFFIGFNL 255
BLAST of CN189709 vs. ExPASy Swiss-Prot
Match: SERC3_HUMAN (Serine incorporator 3 OS=Homo sapiens GN=SERINC3 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14 Identity = 59/209 (28.23%), Postives = 96/209 (45.93%), Query Frame = 3 Query: 123 RIAYCGLFALSLIVSWIL-REVAAPLMEKLPWINH----FHKTPSREWFETD------AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLP-NEIVSFYESISKFGSGXXXXXXXXXXXXXXHRWNDTWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFT-PSGQDCGLHTFFIVMTL 698 R+ Y + LS +VS+I+ R+ ++K+P H+ + D AV R+S +FF + S+LM VK KD R ++H+G W KI +++ F++P S + + G+ H WN++WV E+ WY ALL + Y+L+ GLL+ ++T P G C + FFI + L Sbjct: 39 RLIYAFILLLSTVVSYIMQRKEMETYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDLRAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLVDFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDG--CTENKFFISINL 245
BLAST of CN189709 vs. ExPASy Swiss-Prot
Match: SERC3_MOUSE (Serine incorporator 3 OS=Mus musculus GN=Serinc3 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12 Identity = 44/150 (29.33%), Postives = 70/150 (46.67%), Query Frame = 3 Query: 264 AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLP-NEIVSFYESISKFGSGXXXXXXXXXXXXXXHRWNDTWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFTPSGQDCGLHTFFIVMTL 698 AV R++ +FF +LM+ VK KDPR ++H+G W KI ++I F++P + G+ H WN+ WV E+ WY ALL + + Y+L+ F+ LL+ ++T DC + FI + L Sbjct: 97 AVYRINFAVAIFFFAFFLLMLKVKTSKDPRAAVHNGFWFFKIAAIIGIMIGSFYIPGGSFTEVWFVAGMLGASFFIIIQLVLLVDMAHSWNELWVNRMEEGNPRLWYAALLSFTSLFYILSIVFAALLYVFYT-KPDDCTENKVFISLNL 245
BLAST of CN189709 vs. ExPASy Swiss-Prot
Match: SERC1_BOVIN (Serine incorporator 1 OS=Bos taurus GN=SERINC1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11 Identity = 42/135 (31.11%), Postives = 66/135 (48.89%), Query Frame = 3 Query: 264 AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLPN---EIVSFYESISKFGSGXXXXXXXXXXXXXXHRWNDTWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFT 647 AV R+ G +F+ +LS+LM+ VK+ DPR ++H+G W K ++I FF+P V FY + G+ H WN++WV E+ WY ALL + + Y+L+ L F ++T Sbjct: 89 AVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAIHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFY--VGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAVVLFFVYYT 221
BLAST of CN189709 vs. ExPASy Swiss-Prot
Match: SERC1_PONAB (Serine incorporator 1 OS=Pongo abelii GN=SERINC1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 42/135 (31.11%), Postives = 66/135 (48.89%), Query Frame = 3 Query: 264 AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLPN---EIVSFYESISKFGSGXXXXXXXXXXXXXXHRWNDTWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFT 647 AV R+ G +F+ +LS+LM+ VK+ DPR ++H+G W K ++I FF+P V FY + G+ H WN++WV E+ WY ALL + + Y+L+ L F ++T Sbjct: 89 AVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFY--VGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAIVLFFVYYT 221
BLAST of CN189709 vs. ExPASy Swiss-Prot
Match: SERC1_HUMAN (Serine incorporator 1 OS=Homo sapiens GN=SERINC1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 42/135 (31.11%), Postives = 66/135 (48.89%), Query Frame = 3 Query: 264 AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLPN---EIVSFYESISKFGSGXXXXXXXXXXXXXXHRWNDTWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFT 647 AV R+ G +F+ +LS+LM+ VK+ DPR ++H+G W K ++I FF+P V FY + G+ H WN++WV E+ WY ALL + + Y+L+ L F ++T Sbjct: 89 AVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFY--VGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAIVLFFVYYT 221
BLAST of CN189709 vs. ExPASy Swiss-Prot
Match: SERC1_MOUSE (Serine incorporator 1 OS=Mus musculus GN=Serinc1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11 Identity = 42/135 (31.11%), Postives = 66/135 (48.89%), Query Frame = 3 Query: 264 AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLPN---EIVSFYESISKFGSGXXXXXXXXXXXXXXHRWNDTWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFT 647 AV R+ G +F+ +LS+LM+ VK+ DPR ++H+G W K ++I FF+P V FY + G+ H WN++WV E+ WY ALL + + Y+L+ L F ++T Sbjct: 89 AVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFWFFKFATAVAIIIGAFFIPEGTFTTVWFY--VGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAVVLFFVYYT 221
BLAST of CN189709 vs. ExPASy Swiss-Prot
Match: SERC1_RAT (Serine incorporator 1 OS=Rattus norvegicus GN=Serinc1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 42/135 (31.11%), Postives = 66/135 (48.89%), Query Frame = 3 Query: 264 AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLPN---EIVSFYESISKFGSGXXXXXXXXXXXXXXHRWNDTWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFT 647 AV R+ G +F+ +LS+LM+ VK+ DPR ++H+G W K ++I FF+P V FY + G+ H WN++WV E+ WY ALL + + Y+L+ L F ++T Sbjct: 89 AVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFWFFKFATAVAIIIGAFFIPEGTFTTVWFY--VGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAIILFFVYYT 221 The following BLAST results are available for this feature:
BLAST of CN189709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189709 ID=CN189709; Name=CN189709; organism=Citrus sinensis; type=EST; length=700bpback to top |