CN189705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189705 vs. ExPASy Swiss-Prot
Match: RHM1_ARATH (Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.382e-60 Identity = 112/121 (92.56%), Postives = 117/121 (96.69%), Query Frame = -1 Query: 337 PRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLDEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIKYVFEPNKKT 699 PRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNL+GIWNFTNPGVVSHNEILEMY+ YINPEFKW NFTL+EQAKVIVAPRSNNEMDASKLKKEFPELLSIK+SLIKY + PNKKT Sbjct: 549 PRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYAYGPNKKT 669
BLAST of CN189705 vs. ExPASy Swiss-Prot
Match: RHM3_ARATH (Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.739e-59 Identity = 109/121 (90.08%), Postives = 115/121 (95.04%), Query Frame = -1 Query: 337 PRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLDEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIKYVFEPNKKT 699 PRNFITKISRYNKVVNIPNSMT+LDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYK YI P+FKW NF L+EQAKVIVAPRSNNEMD +KL KEFPE+LSIKDSLIKYVFEPNK+T Sbjct: 544 PRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPDFKWSNFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKYVFEPNKRT 664
BLAST of CN189705 vs. ExPASy Swiss-Prot
Match: RHM2_ARATH (Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.500e-57 Identity = 107/121 (88.43%), Postives = 114/121 (94.21%), Query Frame = -1 Query: 337 PRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLDEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIKYVFEPNKKT 699 PRNFITKISRYNKVV+IPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYK YI P FKW NFT++EQAKVIVA RSNNEMD SKL KEFPE+LSIK+SL+KYVFEPNK+T Sbjct: 547 PRNFITKISRYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKNYIEPGFKWSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYVFEPNKRT 667
BLAST of CN189705 vs. ExPASy Swiss-Prot
Match: YL780_MIMIV (Uncharacterized protein L780 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L780 PE=4 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.484e-23 Identity = 50/120 (41.67%), Postives = 80/120 (66.67%), Query Frame = -1 Query: 352 PRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLDEQAKVIVAPRSNNEMDASKLKKEFPE----LLSIKDSLIKYVFE 699 PR+FITKI Y+++ +IPNSMT+LD+++P+ I+MA+ G +NFTNPG+VSHNEIL + + P W N + ++Q ++ A RSNN ++ KL+ +P+ L I++ + K F+ Sbjct: 169 PRSFITKILSYSRICSIPNSMTILDQMIPVMIDMARNKTTGTFNFTNPGLVSHNEILSLIRDIHKPNLTWENMSREQQLAILKADRSNNLLNTDKLQSLYPDVPDILTGIREVVSKMKFQ 288 The following BLAST results are available for this feature:
BLAST of CN189705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189705 ID=CN189705; Name=CN189705; organism=Citrus sinensis; type=EST; length=699bpback to top |