CN189702 | Citrus Genome Database

Overview


Name	CN189702
Unique Name	CN189702
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	661

Libraries


Library Name	Type
Washington Navel Orange Stored Fruit Rind cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig7608	contig	Csv1_Contig7608:582..1242.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 301.212 bits (770), Expect = 3.099e-81
Identity = 138/157 (87.90%), Postives = 146/157 (92.99%), Query Frame = -1

Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S+DKLLQTRIFSY+DTQRHRLGPNYLQLP NAPKCA HNNH++GFMNFMHRDEEI+YFPSRYDPVRHAEM P PP +C GRREKCII KENNFKQPGERYRSWA DRQERFICRWVDALSDPRVTHEIR IWISYWSQA KS+GQKLAS LNVRP+I
Sbjct:  336 SDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEINYFPSRYDPVRHAEMFPIPPAVCTGRREKCIIEKENNFKQPGERYRSWAADRQERFICRWVDALSDPRVTHEIRSIWISYWSQADKSVGQKLASLLNVRPSI 492

[Close]

BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 291.967 bits (746), Expect = 1.880e-78
Identity = 130/157 (82.80%), Postives = 147/157 (93.63%), Query Frame = -1

Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S+DKLLQTR+FSYADTQRHRLGPNYLQLPVNAPKCA HNNH++GFMNFMHRDEE++YFPSRYD VRHAE +PTPP +C G+RE+CII KENNFK+PGERYR++ P+RQERFI RW+DALSDPR+THEIR IWISYWSQA KSLGQKLASRLNVRP+I
Sbjct:  336 SDDKLLQTRVFSYADTQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDQVRHAEKYPTPPAVCSGKRERCIIEKENNFKEPGERYRTFTPERQERFIQRWIDALSDPRITHEIRSIWISYWSQADKSLGQKLASRLNVRPSI 492

[Close]

BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 4.188e-78
Identity = 130/157 (82.80%), Postives = 144/157 (91.72%), Query Frame = -1

Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S+DKLLQTRIFSY+D QRHRLGPNYLQLPVNAPKCA HNNH++GFMNFMHRDEE++YFPSR+DP RHAE +P PP +  G+R+KCII KENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIR IW SYWSQA K+LGQK+ASRLNVRP +
Sbjct:  336 SDDKLLQTRIFSYSDAQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPCRHAEQYPIPPCVLTGKRDKCIIEKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRSIWFSYWSQADKTLGQKIASRLNVRPTM 492

[Close]

BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_SOLAP (Catalase OS=Soldanella alpina PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 1.592e-77
Identity = 129/157 (82.17%), Postives = 145/157 (92.36%), Query Frame = -1

Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S+DKLLQTRIFSYADTQRHRLGPNYLQLP NAPKCA HNNH++G MNFMHRDEE++YFPSR+DPVRHAE HP PP +  G+R++C+I KENNFKQPGERYR++APDRQERF+CRWVDALSDPRVTHEIR IWISYW+QA KSLGQKLASRLNVRP +
Sbjct:  336 SDDKLLQTRIFSYADTQRHRLGPNYLQLPPNAPKCAHHNNHHEGLMNFMHRDEEVNYFPSRFDPVRHAERHPIPPPVLTGKRDRCMIEKENNFKQPGERYRTFAPDRQERFVCRWVDALSDPRVTHEIRSIWISYWTQADKSLGQKLASRLNVRPTM 492

[Close]

BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA1_SOYBN (Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 1.592e-77
Identity = 130/157 (82.80%), Postives = 143/157 (91.08%), Query Frame = -1

Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S+DKLLQTR+FSYADTQRHRLGPNYLQLP NAPKCA HNNH+DGFMNFMHRDEE++YFPSRYDPVRHAE  P PP I GG+REKC+I KENNFKQPGERYRSW  DRQERF+ RWVDALSDPRVTHEIR IWISYWSQA +SLGQK+AS LN++P+I
Sbjct:  336 SDDKLLQTRVFSYADTQRHRLGPNYLQLPANAPKCAHHNNHHDGFMNFMHRDEEVNYFPSRYDPVRHAEKVPVPPRILGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492

[Close]

BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 2.715e-77
Identity = 129/157 (82.17%), Postives = 143/157 (91.08%), Query Frame = -1

Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S+DKLLQTRIFSYADTQRHRLGPNYLQLP NAPKCA HNNH++GFMNFMHRDEE++YFPSR+DP RHAE +P PP +C G+RE+CII KENNFK+PGERYRSW PDRQERF+ RWVDALSD RVTHEIR IWISYWSQA +SLGQKLAS LNVRP+I
Sbjct:  336 SDDKLLQTRIFSYADTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPSRHAERYPHPPAVCSGKRERCIIEKENNFKEPGERYRSWTPDRQERFVRRWVDALSDTRVTHEIRSIWISYWSQADRSLGQKLASHLNVRPSI 492

[Close]

BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA4_SOYBN (Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 4.631e-77
Identity = 129/157 (82.17%), Postives = 142/157 (90.45%), Query Frame = -1

Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S+DK+LQTRIFSYAD+QRHRLGPNYLQLP NAPKCA HNNH++GFMNF+HRDEE++YFPSRYDPVRHAE  P PP IC GRREKC I KENNFKQPGERYRSWAPDRQ+RF  RWVDALSDPRVTHEIR +WISYWSQA +SLGQK+AS L+ RPNI
Sbjct:  336 SDDKMLQTRIFSYADSQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFIHRDEEVNYFPSRYDPVRHAERFPIPPAICSGRREKCGIEKENNFKQPGERYRSWAPDRQDRFARRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLSTRPNI 492

[Close]

BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 4.631e-77
Identity = 131/157 (83.44%), Postives = 144/157 (91.72%), Query Frame = -1

Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S+DKLLQTRIFSY+DTQRHRLGPNYLQLP NAPKCA HNNH++GFMNFMHRDEE++YFPSRYDPVRHAE HP P  +  G+REKCII KENNFKQPGERYRS++ DRQERFI RW+DALSDPRVTHEIR IWISYWSQA KSLGQK+ASRLNVRP+I
Sbjct:  336 SDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDPVRHAEKHPIPSTVLSGKREKCIIGKENNFKQPGERYRSFSADRQERFINRWIDALSDPRVTHEIRSIWISYWSQADKSLGQKIASRLNVRPSI 492

[Close]

BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA3_SOYBN (Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.032e-76
Identity = 129/157 (82.17%), Postives = 142/157 (90.45%), Query Frame = -1

Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S+DKLLQTRIFSYADTQRHRLGPNYLQLP N+PKCA HNNH+DGFMNFMHRDEE++YFPSRYDPVRHAE  P PP   GG+REKC+I KENNFKQPGERYRSW  DRQERF+ RWVDALSDPRVTHEIR IWISYWSQA +SLGQK+AS LN++P+I
Sbjct:  336 SDDKLLQTRIFSYADTQRHRLGPNYLQLPANSPKCAHHNNHHDGFMNFMHRDEEVNYFPSRYDPVRHAERVPVPPRTLGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492

[Close]

BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA2_SOLLC (Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 2.298e-76
Identity = 130/157 (82.80%), Postives = 144/157 (91.72%), Query Frame = -1

Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S+DK+LQTRIFSY+DTQR+RLGPNYLQLP NAPKCA HNNHYDG MNFMHRDEEIDYFPSRYD VRHAE++P P  +C G+REKCII KENNFKQPGERYRS+ PDRQERFI RWV+ALSDPR+T+EIR IWI+YWSQA KSLGQKLASRLNVRP+I
Sbjct:  336 SDDKMLQTRIFSYSDTQRYRLGPNYLQLPANAPKCAHHNNHYDGSMNFMHRDEEIDYFPSRYDQVRHAEVYPIPSTVCSGKREKCIIQKENNFKQPGERYRSFTPDRQERFIRRWVEALSDPRITYEIRSIWITYWSQADKSLGQKLASRLNVRPSI 492

The following BLAST results are available for this feature:

BLAST of CN189702 vs. ExPASy Swiss-Prot

BLAST of CN189702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68


Match Name	E-value	Identity	Description
CATA1_GOSHI	3.099e-81	87.90	Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P...	[more]
CATA2_ARATH	1.880e-78	82.80	Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV...	[more]
CATA3_NICPL	4.188e-78	82.80	Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN...	[more]
CATA_SOLAP	1.592e-77	82.17	Catalase OS=Soldanella alpina PE=2 SV=1	[more]
CATA1_SOYBN	1.592e-77	82.80	Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1	[more]
CATA1_CUCPE	2.715e-77	82.17	Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ...	[more]
CATA4_SOYBN	4.631e-77	82.17	Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1	[more]
CATA2_GOSHI	4.631e-77	83.44	Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P...	[more]
CATA3_SOYBN	1.032e-76	82.17	Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1	[more]
CATA2_SOLLC	2.298e-76	82.80	Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS06_0002E16_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002E16, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CN189702 ID=CN189702; Name=CN189702; organism=Citrus sinensis; type=EST; length=661bp
CTTTGACGTAACCAGCATTTATTTTAAGGAACATCATGTTTATGAATTAC
AGGACCAACATGTTTTTTTTAGTATTACAAAATAACACACCACCCGAAAA
CGAATTCGCATTCCTTAAACTGCTGACGTCCTCTGTGTTTACTCCTTGCT
AACTCTTTCTAAATCACTCAGCTCCGCATCACCATTAAATGTTAGGCCTC
ACATTCAGACGAGATGCCAACTTCTGACCCAGAGACTTGCAAGCCTGAGA
CCAGTATGAGATCCATATGTGGCGGATCTCATGGGTGACGCGTGGATCAG
ATAAAGCATCAACCCATCTGCAGATGAATCGCTCTTGCCTGTCTGGTGCC
CAAGATCGGTATCTCTCTCCAGGTTGTTTGAAGTTGTTTTCCTTTGGAAT
TATGCACTTCTCGCGCCTTCCGCCGCAGATTTCAGGAGGAGTTGGATGCA
TCTCAGCATGACGGACAGGATCATACCTTGAAGGGAAGTAATCGATCTCC
TCATCCCTGTGCATGAAATTCATGAAACCGTCATAATGATTGTTGTGCTG
AGCACATTTGGGTGCATTTACTGGGAGTTGAAGATAGTTCGGCCCTAGAC
GGTGCCTCTGAGTATCAGCATAGGAGAAGATTCGAGTCTGGAGCAACTTA
TCATTTGAAAT