CN189700

Overview
NameCN189700
Unique NameCN189700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN189700 vs. ExPASy Swiss-Prot
Match: Y5994_ARATH (Uncharacterized protein At5g49945 OS=Arabidopsis thaliana GN=At5g49945 PE=1 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.144e-70
Identity = 127/170 (74.71%), Postives = 156/170 (91.76%), Query Frame = -1 
Query:  274 VADELGVVSESKEVAGDLITDTVLEQVFGEKAFEKHGKDFISMHFSDQHPGTHRKMLLFKFALPDANNMADMTRLVALVPYYIDLIGRYKLSPQARSKTEAARQKAAQEAYKELQNARQEALQRKKADRKKMIEEADAKLSAEAIRKKEAKERARQMKKAVPKMKMTRGH 783
            V++E  ++SESKEVA DLITDTVL+QVFG+KA +K+GK+F+SMH SDQHPG H+KM+LFKF+LPDA +M D+ RLVAL+PYYIDL+GRY+LS QAR+KTE+ RQKAA+EAYKEL NARQEALQ+KKA++KKM+EEA+AK+SAE IRKKEAKERARQ+KKAVPKMKM+R H
Sbjct:  311 VSEEFALISESKEVAADLITDTVLDQVFGDKAVDKYGKNFMSMHISDQHPGKHKKMMLFKFSLPDAKHMDDIVRLVALIPYYIDLVGRYRLSSQARNKTESGRQKAAEEAYKELHNARQEALQKKKAEKKKMMEEAEAKMSAEVIRKKEAKERARQVKKAVPKMKMSRSH 480
The following BLAST results are available for this feature:
BLAST of CN189700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5994_ARATH1.144e-7074.71Uncharacterized protein At5g49945 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0002E15_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002E15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189700 ID=CN189700; Name=CN189700; organism=Citrus sinensis; type=EST; length=783bp
TTTTACGGGCGCGCCCCCCTGTAACAGGTGTCCATGATAAGCTTTATAAA
GGTTTCTAAAGGACTAAACTTGGGTGCACTTCAAAAACCACAGAGATGTG
GTAATGCTGGAGACTAGCTAATACAATTTGACAAAAGTACATTTGCCAGG
AGGATACATGAGAAGGCCAAGAACCTATGTAAAGGCTAGGTAGGCCAAGT
ATGACACAAAAAATAGAGATAAAACTAGAAGGCAAATTCCAGAGTGCCAC
ATGACAGAGCAGGAAATTGACTAGTGACCTCGGGTCATCTTCATCTTCGG
CACAGCTTTCTTCATCTGACGAGCACGCTCTTTCGCTTCCTTCTTGCGAA
TAGCCTCTGCAGATAGCTTTGCATCTGCCTCCTCAATCATCTTCTTCCTA
TCTGCCTTCTTTCTCTGCAAGGCTTCCTGCCTAGCATTTTGAAGTTCTTT
GTATGCCTCTTGGGCTGCCTTCTGTCTGGCTGCCTCTGTTTTAGATCGAG
CCTGTGGACTGAGCTTGTAACGTCCGATCAAATCAATGTAATAGGGTACA
AGAGCAACCAATCGAGTCATATCAGCCATGTTGTTGGCATCAGGTAGGGC
AAACTTAAACAACAGCATCTTCCTATGTGTGCCAGGGTGTTGATCAGAAA
AATGCATTGATATGAAATCCTTTCCATGTTTTTCAAAAGCTTTTTCGCCG
AACACCTGTTCAAGCACAGTATCTGTGATCAAATCCCCAGCAACCTCCTT
ACTCTCCGAAACAACACCCAATTCATCCGCCAC
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