CN189696

Overview
NameCN189696
Unique NameCN189696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: ECA4_ARATH (Calcium-transporting ATPase 4, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA4 PE=2 SV=2)

HSP 1 Score: 439.499 bits (1129), Expect = 8.889e-123
Identity = 219/240 (91.25%), Postives = 233/240 (97.08%), Query Frame = 2
Query:   17 KDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYL 736
            +DPPR+EVRQAI DC+ AGIRVMVITGDNK+TAEAICREIGVF A EDISS+S+TGKEFMD+ +QKN+LRQ GGLLFSRAEP+HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGI+GTEVAKEASD+VLADDNFSTIVAAVGEGRSIY+NMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLIT WILFRY+
Sbjct:  628 RDPPRKEVRQAIADCRTAGIRVMVITGDNKSTAEAICREIGVFEADEDISSRSLTGKEFMDVKDQKNHLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGISGTEVAKEASDLVLADDNFSTIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITAWILFRYM 867          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: ECA1_ARATH (Calcium-transporting ATPase 1, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA1 PE=1 SV=2)

HSP 1 Score: 437.958 bits (1125), Expect = 2.586e-122
Identity = 219/240 (91.25%), Postives = 232/240 (96.67%), Query Frame = 2
Query:   17 KDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYL 736
            +DPPR+EVRQAI DC+ AGIRVMVITGDNK+TAEAICREIGVF A EDISS+S+TG EFMD+ +QKN+LRQ GGLLFSRAEP+HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGI+GTEVAKEASDMVLADDNFSTIVAAVGEGRSIY+NMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLIT WILFRY+
Sbjct:  628 RDPPRKEVRQAIADCRTAGIRVMVITGDNKSTAEAICREIGVFEADEDISSRSLTGIEFMDVQDQKNHLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGISGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITAWILFRYM 867          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: ECA2_ARATH (Calcium-transporting ATPase 2, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA2 PE=2 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 4.900e-105
Identity = 193/246 (78.46%), Postives = 213/246 (86.59%), Query Frame = 2
Query:    5 IVVTKDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDI--HNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYL 736
            +V  +DPPREEV +AIEDC+ AGIRVMVITGDNK+TAEAIC EI +F  +ED+S  S TGKEFM +    +   L + GG +FSRAEPRHKQEIVR+LKE GE+VAMTGDGVNDAPALKLADIG+AMGI GTEVAKEASDMVLADDNFSTIV+AV EGRSIY+NMKAFIRYMISSN+GEV SIFLTAALGIPE MIPVQLLWVNLVTDGPPATALGFNP D DIMKKPPR+SDD LI  W+L RYL
Sbjct:  618 VVGLRDPPREEVGRAIEDCRDAGIRVMVITGDNKSTAEAICCEIRLFSENEDLSQSSFTGKEFMSLPASRRSEILSKSGGKVFSRAEPRHKQEIVRMLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADIDIMKKPPRKSDDCLIDSWVLIRYL 863          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: ECAP_SOLLC (Calcium-transporting ATPase, endoplasmic reticulum-type OS=Solanum lycopersicum GN=LCA1 PE=2 SV=1)

HSP 1 Score: 373.244 bits (957), Expect = 7.823e-103
Identity = 184/246 (74.80%), Postives = 212/246 (86.18%), Query Frame = 2
Query:    5 IVVTKDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNY--LRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYL 736
            +V  +DPPREEV +A+ DC+ AGI++MVITGDNK+TAEA+CREI +F   E++   S TGKEFM   +Q+    L QDGG +FSRAEPRHKQEIVR+LKE GE+VAMTGDGVNDAPALKLADIG+AMGI GTEVAKEASDMVLADDNFSTIV+AV EGRSIY+NMKAFIRYMISSN+GEV SIFLTA LGIPE +IPVQLLWVNLVTDGPPATALGFNP D DIM+KPPR++ D+LI  W+ FRY+
Sbjct:  619 VVGLRDPPREEVHRAVNDCRRAGIKIMVITGDNKSTAEAVCREIQLFSNGENLRGSSFTGKEFMAFSSQQQIEILSQDGGKVFSRAEPRHKQEIVRMLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAVLGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKNTDALINSWVFFRYM 864          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: ATC_ARTSF (Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Artemia sanfranciscana PE=2 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.443e-88
Identity = 167/244 (68.44%), Postives = 194/244 (79.51%), Query Frame = 2
Query:    5 IVVTKDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYL 736
            +V   DPPR+EV  AIE C+AAGIRV+VITGDNK TAEAICR IGVFG  E+    + TG+EF D+  +          LF+R EP HK +IV  L+  GE+ AMTGDGVNDAPALK A+IG+AMG +GT VAK A++MVLADDNFSTIVAAV EGR+IY+NMK FIRY+ISSNIGEV SIFLTAALG+PE +IPVQLLWVNLVTDG PATALGFNPPD DIM KPPRR+D+ LIT W+ FRY+
Sbjct:  600 VVGMLDPPRKEVLDAIERCRAAGIRVIVITGDNKATAEAICRRIGVFGEDENTEGMAYTGREFDDLSVEGQRDAVARSRLFARVEPFHKSKIVEYLQGMGEISAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRRADEGLITGWLFFRYM 842          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: ATC1_ANOGA (Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Anopheles gambiae GN=Ca-P60A PE=3 SV=5)

HSP 1 Score: 322.013 bits (824), Expect = 2.068e-87
Identity = 163/244 (66.80%), Postives = 195/244 (79.92%), Query Frame = 2
Query:    5 IVVTKDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYL 736
            +V   DPPR+EV+ +I  C+AAGIRV+VITGDNK TAEAICR IGVFG  ED + +S +G+EF D+   +         LFSR EP HK +IV  L+   E+ AMTGDGVNDAPALK A+IG+AMG +GT VAK A++MVLADDNFS+IVAAV EGR+IY+NMK FIRY+ISSNIGEV SIFLTAALG+PE +IPVQLLWVNLVTDG PATALGFNPPD DIM KPPR++D+ LI+ W+ FRY+
Sbjct:  595 VVGMLDPPRKEVQDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFGEDEDTTGKSYSGREFDDLSVSEQREACSRARLFSRVEPAHKSKIVEFLQSMNEISAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMTKPPRKADEGLISGWLFFRYM 837          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: ATC1_DROME (Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Drosophila melanogaster GN=Ca-P60A PE=1 SV=2)

HSP 1 Score: 318.931 bits (816), Expect = 1.751e-86
Identity = 161/244 (65.98%), Postives = 195/244 (79.92%), Query Frame = 2
Query:    5 IVVTKDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYL 736
            +V   DPPR+EV  +I  C+AAGIRV+VITGDNK TAEAICR IGVF   ED + +S +G+EF D+   +         LFSR EP+HK +IV  L+   E+ AMTGDGVNDAPALK A+IG+AMG +GT VAK A++MVLADDNFS+IV+AV EGR+IY+NMK FIRY+ISSNIGEV SIFLTAALG+PE +IPVQLLWVNLVTDG PATALGFNPPD DIM+KPPR++D+ LI+ W+ FRY+
Sbjct:  596 VVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFAEDEDTTGKSYSGREFDDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNEISAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKPPRKADEGLISGWLFFRYM 838          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: ATC1_DROPS (Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Drosophila pseudoobscura pseudoobscura GN=Ca-P60A PE=3 SV=2)

HSP 1 Score: 317.39 bits (812), Expect = 5.094e-86
Identity = 162/244 (66.39%), Postives = 194/244 (79.51%), Query Frame = 2
Query:    5 IVVTKDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYL 736
            +V   DPPR+EV  AI  C+AAGIRV+VITGDNK TAEAICR IGVF   ED + +S +G+EF D+   +         LFSR EP+HK +IV  L+   E+ AMTGDGVNDAPALK A+IG+AMG +GT VAK A++MVLADDNFS+IV+AV EGR+IY+NMK FIRY+ISSNIGEV SIFLTAALG+PE +IPVQLLWVNLVTDG PATALGFNPPD DIM KPPR++D+ LI+ W+ FRY+
Sbjct:  596 VVGMLDPPRKEVFDAIVRCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLSIAEQKAAVARSRLFSRVEPQHKSKIVEYLQGMNEISAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKADEGLISGWLFFRYM 838          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: AT2A1_MAKNI (Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Makaira nigricans GN=atp2a1 PE=2 SV=2)

HSP 1 Score: 308.916 bits (790), Expect = 1.812e-83
Identity = 155/239 (64.85%), Postives = 189/239 (79.08%), Query Frame = 2
Query:   20 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYL 736
            DPPR+EV  +IE C+ AGIRV++ITGDNK TA AICR IG+F   ED+S+++ TG+EF D+ +Q           F+R EP HK +IV  L+ + ++ AMTGDGVNDAPALK A+IG+AMG +GT VAK AS+MVLADDNFS+IVAAV EGR+IY+NMK FIRY+ISSN+GEV  IFLTAALG+PE +IPVQLLWVNLVTDG PATALGFNPPD DIM KPPR   + LI+ W+ FRY+
Sbjct:  598 DPPRKEVTGSIELCRDAGIRVIMITGDNKGTAIAICRRIGIFKEDEDVSNKAYTGREFDDLPSQDQAEAVRRACCFARVEPSHKSKIVEFLQGNDDITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMGKPPRSPKEPLISGWLFFRYM 835          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: AT2A2_HUMAN (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Homo sapiens GN=ATP2A2 PE=1 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.366e-83
Identity = 155/239 (64.85%), Postives = 186/239 (77.82%), Query Frame = 2
Query:   20 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYL 736
            DPPR EV  +++ C+ AGIRV++ITGDNK TA AICR IG+FG  ED++S++ TG+EF +++             F+R EP HK +IV  L+   E+ AMTGDGVNDAPALK A+IG+AMG +GT VAK AS+MVLADDNFSTIVAAV EGR+IY+NMK FIRY+ISSN+GEV  IFLTAALG PE +IPVQLLWVNLVTDG PATALGFNPPD DIM KPPR   + LI+ W+ FRYL
Sbjct:  600 DPPRIEVASSVKLCRQAGIRVIMITGDNKGTAVAICRRIGIFGQDEDVTSKAFTGREFDELNPSAQRDACLNARCFARVEPSHKSKIVEFLQSFDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYL 837          
The following BLAST results are available for this feature:
BLAST of CN189696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
ECA4_ARATH8.889e-12391.25Calcium-transporting ATPase 4, endoplasmic reticul... [more]
ECA1_ARATH2.586e-12291.25Calcium-transporting ATPase 1, endoplasmic reticul... [more]
ECA2_ARATH4.900e-10578.46Calcium-transporting ATPase 2, endoplasmic reticul... [more]
ECAP_SOLLC7.823e-10374.80Calcium-transporting ATPase, endoplasmic reticulum... [more]
ATC_ARTSF2.443e-8868.44Calcium-transporting ATPase sarcoplasmic/endoplasm... [more]
ATC1_ANOGA2.068e-8766.80Calcium-transporting ATPase sarcoplasmic/endoplasm... [more]
ATC1_DROME1.751e-8665.98Calcium-transporting ATPase sarcoplasmic/endoplasm... [more]
ATC1_DROPS5.094e-8666.39Calcium-transporting ATPase sarcoplasmic/endoplasm... [more]
AT2A1_MAKNI1.812e-8364.85Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A2_HUMAN2.366e-8364.85Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0002E12_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189696 ID=CN189696; Name=CN189696; organism=Citrus sinensis; type=EST; length=736bp
GAGGATTGTGGTCACTAAGGATCCTCCTCGTGAAGAAGTTCGTCAAGCAA
TTGAGGATTGCAAAGCCGCTGGAATACGTGTCATGGTCATTACAGGGGAC
AACAAAAATACAGCTGAAGCTATCTGCCGAGAAATTGGTGTATTTGGAGC
TCATGAAGATATCAGTTCACAAAGTATAACTGGAAAAGAATTTATGGATA
TCCACAATCAGAAAAACTATTTAAGACAAGATGGTGGGCTTCTGTTCTCC
AGGGCTGAACCAAGGCATAAACAAGAAATAGTGAGGTTGCTCAAAGAGGA
TGGTGAAGTTGTTGCAATGACTGGAGATGGAGTGAACGATGCACCTGCAT
TGAAATTGGCTGATATAGGGGTAGCAATGGGCATTGCAGGGACAGAGGTT
GCCAAGGAAGCCTCTGATATGGTATTAGCTGATGATAATTTTAGCACAAT
AGTTGCCGCTGTTGGTGAAGGCAGATCCATCTACGACAACATGAAGGCTT
TTATTAGGTATATGATCTCCTCAAATATTGGCGAGGTTGCGTCTATATTC
TTGACAGCTGCTTTGGGTATTCCAGAAGGCATGATACCCGTTCAGCTTCT
CTGGGTAAATCTTGTTACCGATGGGCCCCCTGCAACAGCCTTAGGATTTA
ACCCTCCAGACAAGGATATAATGAAGAAGCCCCCTCGAAGAAGCGATGAC
TCATTGATCACTCCTTGGATTTTATTCCGCTATCTG
back to top