CN189694
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189694 vs. ExPASy Swiss-Prot
Match: WIT1_ARATH (WPP domain-interacting tail-anchored protein 1 OS=Arabidopsis thaliana GN=WIT1 PE=1 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 5.118e-40 Identity = 83/194 (42.78%), Postives = 120/194 (61.86%), Query Frame = 2 Query: 65 MDTDADQETSASVVVNVGDS---ESESNKVYSLEGISANGDVIE-ELRSAGEVFSQLELHIACSSEKLVNLNILTMHVATRESEFEAFAKKREHIL---------DDDSVETALAFDLLSGLLDSELRELENFITTLEADFVKAHELISSYTELGKASIEMEEKLLDSEDSLQQSRDQISEIKKQSAKFQDLVS 607 M+T+ + + + SV N DS E S K E +S G V+ +L SAGEV +++EL A SEKLVNL++LTM + TRE++FE+F K+E DDDS E AL FDLLS +L+SE++ELE+ + L+ + A +IS + G+A +++E KL D+E SL Q +Q+ E+KKQS+ FQ L S Sbjct: 1 METETEHDRTVSVDDN--DSLVPEPSSTKESFFEDLSLTGQVMNPQLSSAGEVLTKVELDFAFVSEKLVNLSLLTMQLGTRENDFESFVSKKEEDEEEPSSNVDDDDDSAEKALEFDLLSSILNSEVKELESLLGFLQNEIQSARVMISPFQHDGEAFLDLEGKLNDTEQSLGQLMEQVVEMKKQSSNFQRLSS 192 HSP 2 Score: 54.299 bits (129), Expect = 5.118e-40 Identity = 27/57 (47.37%), Postives = 39/57 (68.42%), Query Frame = 3 Query: 594 RTLSALDREGNWISDKDTGSLEDDQFLNENAKIKLQTAETARHFLRMLEKSLAREMD 764 R S LD +G+W + + S D +F + +AKI +QTA+ R+ LRMLEKSLA+EM+ Sbjct: 189 RLSSGLDEQGSWSGGQTSVSQNDGEFGDLSAKINMQTADQQRNVLRMLEKSLAKEME 245
BLAST of CN189694 vs. ExPASy Swiss-Prot
Match: WIT2_ARATH (WPP domain-interacting tail-anchored protein 2 OS=Arabidopsis thaliana GN=WIT2 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.552e-16 Identity = 53/139 (38.13%), Postives = 80/139 (57.55%), Query Frame = 2 Query: 185 EELRSAGEVFSQLELHIACSSEKLVNLNILTMHVATRESEFEAFAKKREHILDDD--SVETALAFDLLSGLLDSELRELENFITTLEADFVKAHELISSYTELGKASIEMEEKLLDSEDSLQQSRDQISEIKKQSAKFQ 595 EE + + ++LE+ A +SEKL+NL++L MH+ +++ E LD S E AL FDLL G+L+SE++E++ + LEA V ISS I +E KL +S +SL+QSR Q+SEI Q A+ + Sbjct: 18 EEEQEMLRMLTKLEIDSAYTSEKLMNLHVLLMHLLAWDNDLEGMGT-----LDSSPASFEKALTFDLLCGILESEVKEVDEVLDVLEAQIVDTSYKISSCKH--GNYIVIEGKLGESAESLKQSRGQVSEITLQLAQLR 149 HSP 2 Score: 26.9498 bits (58), Expect = 9.552e-16 Identity = 14/40 (35.00%), Postives = 27/40 (67.50%), Query Frame = 3 Query: 648 GSLEDDQFLNENAKIKLQTAETA-RHFLRMLEKSLAREMD 764 G+ E+++ + K L+ ++ ++ LRMLEKSL+RE++ Sbjct: 158 GTSENEESVELRQKYALKPSDLRHKNALRMLEKSLSRELE 197 The following BLAST results are available for this feature:
BLAST of CN189694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189694 ID=CN189694; Name=CN189694; organism=Citrus sinensis; type=EST; length=766bpback to top |