CN189684

Overview
NameCN189684
Unique NameCN189684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB1_GOSHI (V-type proton ATPase subunit B 1 OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 482.641 bits (1241), Expect = 9.505e-136
Identity = 244/248 (98.39%), Postives = 245/248 (98.79%), Query Frame = 1
Query:    7 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGM 750
            EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKT +LLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQL NRQIYPPINVLPSLSRLMKSAIGEGM
Sbjct:  141 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTGDLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGM 388          
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB2_GOSHI (V-type proton ATPase subunit B 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 479.174 bits (1232), Expect = 1.051e-134
Identity = 242/248 (97.58%), Postives = 243/248 (97.98%), Query Frame = 1
Query:    7 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGM 750
            EEMIQTGISTIDVMNSIARGQKIP FSAAGLPHNEIAAQICRQAGLVKRLEK  +LLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQL NRQIYPPINVLPSLSRLMKSAIGEGM
Sbjct:   39 EEMIQTGISTIDVMNSIARGQKIPFFSAAGLPHNEIAAQICRQAGLVKRLEKAGDLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGM 286          
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB2_ARATH (V-type proton ATPase subunit B2 OS=Arabidopsis thaliana GN=VHA-B2 PE=2 SV=1)

HSP 1 Score: 478.789 bits (1231), Expect = 1.373e-134
Identity = 242/248 (97.58%), Postives = 244/248 (98.39%), Query Frame = 1
Query:    7 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGM 750
            EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEK+DNLLE  E+DNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQL NRQIYPPINVLPSLSRLMKSAIGEGM
Sbjct:  140 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEHQEDDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGM 387          
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB1_ARATH (V-type proton ATPase subunit B1 OS=Arabidopsis thaliana GN=VHA-B1 PE=2 SV=2)

HSP 1 Score: 476.093 bits (1224), Expect = 8.897e-134
Identity = 242/248 (97.58%), Postives = 243/248 (97.98%), Query Frame = 1
Query:    7 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGM 750
            EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKT +LLED  EDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQL NRQIYPPINVLPSLSRLMKSAIGEGM
Sbjct:  139 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTVDLLEDHGEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGM 386          
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB3_ARATH (V-type proton ATPase subunit B3 OS=Arabidopsis thaliana GN=VHA-B3 PE=2 SV=1)

HSP 1 Score: 474.552 bits (1220), Expect = 2.589e-133
Identity = 242/249 (97.19%), Postives = 244/249 (97.99%), Query Frame = 1
Query:    7 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLL-EDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGM 750
            EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKT+NL+ ED  EDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQL NRQIYPPINVLPSLSRLMKSAIGEGM
Sbjct:  139 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTENLIQEDHGEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGM 387          
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB2_HORVU (V-type proton ATPase subunit B 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 473.011 bits (1216), Expect = 7.531e-133
Identity = 239/248 (96.37%), Postives = 242/248 (97.58%), Query Frame = 1
Query:    7 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGM 750
            EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLE++ +  E GEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQL NRQIYPPINVLPSLSRLMKSAIGEGM
Sbjct:  136 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEQSKHAAEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGM 383          
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB1_HORVU (V-type proton ATPase subunit B 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 466.463 bits (1199), Expect = 7.049e-131
Identity = 237/248 (95.56%), Postives = 239/248 (96.37%), Query Frame = 1
Query:    7 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGM 750
            EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEK  +    GE+DNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGR GSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQL NRQIYPPINVLPSLSRLMKSAIGEGM
Sbjct:  141 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKGKHAEGGGEDDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRTGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGM 388          
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB1_ACEAT (V-type proton ATPase subunit B 1 OS=Acetabularia acetabulum PE=2 SV=1)

HSP 1 Score: 443.736 bits (1140), Expect = 4.893e-124
Identity = 224/249 (89.96%), Postives = 237/249 (95.18%), Query Frame = 1
Query:    7 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDG-EEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGM 750
            EEMIQTG+STIDVMNSIARGQKIPLFSAAGLPHN+IAAQICRQAGLVKR  + D++++ G EE+ FAIVFAAMGVNMETA +FK+DFEENGSME+  LFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGRKGSITQ+PILTMPNDDITHP PDLTGYITEGQIY+DRQL NRQIYPPINVLPSLSRLMKSAIGEGM
Sbjct:  146 EEMIQTGVSTIDVMNSIARGQKIPLFSAAGLPHNDIAAQICRQAGLVKRGNQ-DSMIDAGHEEEEFAIVFAAMGVNMETAHYFKQDFEENGSMEKTVLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQLPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGM 393          
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB2_ACEAT (V-type proton ATPase subunit B 2 OS=Acetabularia acetabulum PE=2 SV=1)

HSP 1 Score: 435.261 bits (1118), Expect = 1.740e-121
Identity = 219/249 (87.95%), Postives = 235/249 (94.38%), Query Frame = 1
Query:    7 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDG-EEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGM 750
            EEM QTG+STIDVMNSIARGQKIPLFSAAGLPHN+IAAQICRQAGLV++ +  D++++ G EE+ FAIVFAAMGVNMETA +FK+DFEENGSME+  LFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGRKGSITQ+PILTMPNDDITHP PDLTGYITEGQIY+DRQL N QIYPPINVLP+LSRLMKSAIGEGM
Sbjct:  146 EEMSQTGVSTIDVMNSIARGQKIPLFSAAGLPHNDIAAQICRQAGLVRQ-KAQDSMIDAGREEEEFAIVFAAMGVNMETAHYFKQDFEENGSMEKTVLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQLPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNIQIYPPINVLPTLSRLMKSAIGEGM 393          
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_MANSE (V-type proton ATPase subunit B OS=Manduca sexta GN=VHA55 PE=2 SV=1)

HSP 1 Score: 429.869 bits (1104), Expect = 7.312e-120
Identity = 217/248 (87.50%), Postives = 230/248 (92.74%), Query Frame = 1
Query:    7 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGM 750
            EEMIQTGIS IDVMNSIARGQKIP+FSAAGLPHNEIAAQICRQAGLVK   K+   + D  EDNFAIVFAAMGVNMETA+FFK+DFEENGSME V LFLNLANDPTIERIITPR+ALT AE+LAY+C KHVLVILTDMSSYA+ALREVSAAREEVPGRRG+PGYMYTDLA IYERAGR+EGR GSITQIPILTMPNDDITHP PDLTGYITEGQIY+DRQL NRQIYPP+NVLPSLSRLMKSAIGEGM
Sbjct:  150 EEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKIPGKS---VLDDHEDNFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSAIGEGM 394          
The following BLAST results are available for this feature:
BLAST of CN189684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
VATB1_GOSHI9.505e-13698.39V-type proton ATPase subunit B 1 OS=Gossypium hirs... [more]
VATB2_GOSHI1.051e-13497.58V-type proton ATPase subunit B 2 (Fragment) OS=Gos... [more]
VATB2_ARATH1.373e-13497.58V-type proton ATPase subunit B2 OS=Arabidopsis tha... [more]
VATB1_ARATH8.897e-13497.58V-type proton ATPase subunit B1 OS=Arabidopsis tha... [more]
VATB3_ARATH2.589e-13397.19V-type proton ATPase subunit B3 OS=Arabidopsis tha... [more]
VATB2_HORVU7.531e-13396.37V-type proton ATPase subunit B 2 OS=Hordeum vulgar... [more]
VATB1_HORVU7.049e-13195.56V-type proton ATPase subunit B 1 OS=Hordeum vulgar... [more]
VATB1_ACEAT4.893e-12489.96V-type proton ATPase subunit B 1 OS=Acetabularia a... [more]
VATB2_ACEAT1.740e-12187.95V-type proton ATPase subunit B 2 OS=Acetabularia a... [more]
VATB_MANSE7.312e-12087.50V-type proton ATPase subunit B OS=Manduca sexta GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002E04_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189684 ID=CN189684; Name=CN189684; organism=Citrus sinensis; type=EST; length=751bp
GAGGCTGAAGAGATGATACAGACAGGGATTTCTACCATTGATGTGATGAA
CTCCATTGCTAGAGGACAAAAGATCCCTCTTTTTTCTGCTGCCGGTCTTC
CCCATAATGAAATTGCTGCTCAGATTTGTCGCCAGGCTGGTTTAGTCAAG
CGATTGGAGAAGACTGATAATCTTCTTGAGGATGGGGAAGAGGACAACTT
TGCAATTGTGTTTGCAGCTATGGGTGTAAATATGGAGACTGCACAGTTTT
TCAAACGTGATTTTGAGGAAAATGGATCAATGGAGCGAGTGACTCTTTTT
CTGAATCTGGCTAACGACCCTACAATTGAACGTATTATCACTCCTCGTAT
TGCTCTTACTACTGCAGAGTATCTGGCATATGAATGTGGGAAGCATGTTC
TTGTCATACTGACGGACATGAGTTCTTATGCTGATGCTCTTCGTGAGGTG
TCTGCTGCCCGAGAGGAAGTGCCTGGAAGAAGAGGGTATCCTGGGTATAT
GTATACTGATTTGGCTCAAATTTATGAGCGTGCTGGACGAATTGAAGGTC
GAAAAGGTTCCATCACCCAAATTCCAATATTGACTATGCCAAATGACGAT
ATTACACATCCCACTCCAGATCTTACGGGATATATCACCGAGGGGCAGAT
TTACATTGACAGGCAGCTCCAGAACAGACAGATATATCCTCCGATCAATG
TCCTTCCGTCCCTATCTCGTCTGATGAAGAGTGCTATTGGTGAGGGGATG
A
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