DR908825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908825 vs. ExPASy Swiss-Prot
Match: RS8_MAIZE (40S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2) HSP 1 Score: 261.922 bits (668), Expect = 1.571e-69 Identity = 136/178 (76.40%), Postives = 142/178 (79.78%), Query Frame = 1 Query: 40 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGS 573 MGISRDSMH YELGRQPANTKLSSNKTVRR+RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGVDIGR EG+E +A A EE KKS+HV RKLEKR++ RTLDPHIEEQFGS Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEA-AAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGS 177
BLAST of DR908825 vs. ExPASy Swiss-Prot
Match: RS8_ORYSJ (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2) HSP 1 Score: 258.84 bits (660), Expect = 1.330e-68 Identity = 136/178 (76.40%), Postives = 143/178 (80.34%), Query Frame = 1 Query: 40 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGS 573 MGISRDSMH YELGRQPANTKLSSNKTVRR+RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGVDIGR EG++ +A TEEAKKS+HV+RKLEKRQ+ RTLD HIEEQFGS Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGR-KKKAPAAKKDAEGQDAEA-TTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGS 176
BLAST of DR908825 vs. ExPASy Swiss-Prot
Match: RS8_PRUAR (40S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 1.625e-66 Identity = 134/177 (75.71%), Postives = 140/177 (79.10%), Query Frame = 1 Query: 40 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFG 570 MGISRDSMH YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV+IGR EEG+A TEEAKKS+HV KLEKRQ+ RTLD HIEEQFG Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKKTAAAKKDTP--EEGEA-TTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFG 174
BLAST of DR908825 vs. ExPASy Swiss-Prot
Match: RS82_ARATH (40S ribosomal protein S8-2 OS=Arabidopsis thaliana GN=RPS8B PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.288e-63 Identity = 128/178 (71.91%), Postives = 136/178 (76.40%), Query Frame = 1 Query: 40 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGS 573 MGISRDS+H YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGVDIGR ++G+A TEE KKS+HV RKLE RQ+ R LD H+EEQF S Sbjct: 1 MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGVDIGRK-------------KKGEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSS 165
BLAST of DR908825 vs. ExPASy Swiss-Prot
Match: RS81_ARATH (40S ribosomal protein S8-1 OS=Arabidopsis thaliana GN=RPS8A PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.288e-63 Identity = 124/179 (69.27%), Postives = 136/179 (75.98%), Query Frame = 1 Query: 40 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR-XXXXXXXXXXXXEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGS 573 MGISRDS+H YE+GRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV++GR EGEE A EE KKS+H+LRK+ RQ+ R+LD HIE+QF S Sbjct: 1 MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGVELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFAS 179
BLAST of DR908825 vs. ExPASy Swiss-Prot
Match: RS8_DICDI (40S ribosomal protein S8 OS=Dictyostelium discoideum GN=rps8 PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 6.877e-41 Identity = 91/180 (50.56%), Postives = 113/180 (62.78%), Query Frame = 1 Query: 40 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSN---KTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFG 570 MGISRD++H YELGRQ A TK+ S K VR IRVRGG+ K+RALRLDTGN+SW +E +TRK RIL+VVYNA++N+LVRT TLVK +IVQ+DA P+KQWY HYGV +G+ + + D A + KKS+ +L KL R K R LD IE Q G Sbjct: 1 MGISRDALHKHRLTGAARKCNYKKRKYELGRQAAKTKICSQGEEKRVRSIRVRGGHQKFRALRLDTGNFSWATEKITRKCRILNVVYNATSNDLVRTNTLVKGSIVQIDATPYKQWYETHYGVVVGK-----------KKSAKKDGEAEQVVKKSASLLAKLASRAKGRVLDSAIESQIG 169
BLAST of DR908825 vs. ExPASy Swiss-Prot
Match: RS8_ICTPU (40S ribosomal protein S8 OS=Ictalurus punctatus GN=rps8 PE=2 SV=3) HSP 1 Score: 164.466 bits (415), Expect = 3.413e-40 Identity = 88/176 (50.00%), Postives = 111/176 (63.07%), Query Frame = 1 Query: 40 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQF 567 MGISRD+ H YELGR P+NTKL K + +RVRGGN K+RALRLD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ ++ VD+APF+QWY HY + +GR EE D K+S V +K +KR+K+ + P ++EQF Sbjct: 1 MGISRDNWHKRRKTGGKRKPVHKKRKYELGRPPSNTKLGP-KRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVILVDSAPFRQWYESHYALPLGRKKGAKLTP------EEED---ILNKKRSKKVQKKFDKRRKNSKISPLLDEQF 166
BLAST of DR908825 vs. ExPASy Swiss-Prot
Match: RS8_CAEEL (40S ribosomal protein S8 OS=Caenorhabditis elegans GN=rps-8 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 7.116e-38 Identity = 85/178 (47.75%), Postives = 111/178 (62.36%), Query Frame = 1 Query: 40 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGS 573 MGISRDS H +ELGR ANTK+ +++ VR +R RGGN K+RALRLD+GN+SW SE TRKTRI+D +YNA+NNELVRT+TLVK AI+ VDAAPF+QWY HY + + R EE +A + K+S H ++K +RQK +D + EQF + Sbjct: 1 MGISRDSWHKRYKTGATQPVPHKKRKFELGRPAANTKIGAHR-VRLVRTRGGNEKYRALRLDSGNFSWASEQTTRKTRIVDTMYNATNNELVRTKTLVKGAIISVDAAPFRQWYEAHYALPLARKKNAKL-------SEEDNAILNK--KRSHHTMKKYTERQKTAAVDALLIEQFNT 168
BLAST of DR908825 vs. ExPASy Swiss-Prot
Match: RS8_GRIJA (40S ribosomal protein S8 OS=Griffithsia japonica GN=RPS8 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.214e-37 Identity = 92/179 (51.40%), Postives = 111/179 (62.01%), Query Frame = 1 Query: 40 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEAKKSSHVLRKLEKRQKDR-TLDPHIEEQFGS 573 MGISRDS H YELGRQPA TK+ K VR +RVRGGN+K RALRL++GN++WGSEA T K+RIL+VVYNASNNELVRT T VK I+Q+DA PF+Q+Y HYG+DIG+ + GD EE+K S K EKR + R LD I+E F S Sbjct: 1 MGISRDSRHKRRLTGGKHPYTCKKRKYELGRQPAMTKIGG-KLVRTVRVRGGNLKSRALRLESGNFAWGSEAFTSKSRILNVVYNASNNELVRTNTFVKGCIIQIDATPFRQYYHNHYGIDIGKK-------------KAGD----EESKFSKRHAGKQEKRCQTRLPLDEGIKELFQS 161
BLAST of DR908825 vs. ExPASy Swiss-Prot
Match: RS8_DANRE (40S ribosomal protein S8 OS=Danio rerio GN=rps8 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.214e-37 Identity = 86/179 (48.04%), Postives = 106/179 (59.22%), Query Frame = 1 Query: 40 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEE---AKKSSHVLRKLEKRQKDRTLDPHIEEQF 567 MGISRD+ H YELGR ANTK+ + + IRVRGGN K+RALRLD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ +V VD+ P++QWY HY + +GR P EE K+S V +K R+K + P +EEQF Sbjct: 1 MGISRDNWHKRRRTGGKRKPVHKKRKYELGRPAANTKIGPRR-IHTIRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVVLVDSTPYRQWYESHYALPLGRKKGAKL------------TPEEEEILNKKRSKKVQKKFTLRRKTAKISPLLEEQF 166 The following BLAST results are available for this feature:
BLAST of DR908825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908825 ID=DR908825; Name=DR908825; organism=Citrus sinensis; type=EST; length=574bpback to top |