DR908821
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908821 vs. ExPASy Swiss-Prot
Match: NC2A_RAT (Dr1-associated corepressor OS=Rattus norvegicus GN=Drap1 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.546e-24 Identity = 57/129 (44.19%), Postives = 86/129 (66.67%), Query Frame = 3 Query: 33 RKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSSLHLKHCVQSYNVFDFLRDIVSRVPD-YSHGHSDATSEDRSISKRRK--AAGDECNDSDEESKRSRM 410 +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L + ++T R AKTM++ HLK C++ FDFL+D+V+ VPD G + T D+ + RK ++G + + +SK ++ Sbjct: 5 KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHTDGDKGPRRGRKPGSSGRKNGGTGSKSKDKKL 133
BLAST of DR908821 vs. ExPASy Swiss-Prot
Match: NC2A_HUMAN (Dr1-associated corepressor OS=Homo sapiens GN=DRAP1 PE=1 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 7.670e-24 Identity = 53/109 (48.62%), Postives = 75/109 (68.81%), Query Frame = 3 Query: 33 RKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSSLHLKHCVQSYNVFDFLRDIVSRVPD-YSHGHSDATSEDRSISKRRK 356 +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L + ++T R AKTM++ HLK C++ FDFL+D+V+ VPD G + D+ + RK Sbjct: 5 KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHMDGDKGARRGRK 113
BLAST of DR908821 vs. ExPASy Swiss-Prot
Match: NC2A_MOUSE (Dr1-associated corepressor OS=Mus musculus GN=Drap1 PE=2 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 1.002e-23 Identity = 53/109 (48.62%), Postives = 75/109 (68.81%), Query Frame = 3 Query: 33 RKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSSLHLKHCVQSYNVFDFLRDIVSRVPD-YSHGHSDATSEDRSISKRRK 356 +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L + ++T R AKTM++ HLK C++ FDFL+D+V+ VPD G + D+ + RK Sbjct: 5 KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHVDGDKGPRRGRK 113
BLAST of DR908821 vs. ExPASy Swiss-Prot
Match: NC2A_BOVIN (Dr1-associated corepressor OS=Bos taurus GN=DRAP1 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.002e-23 Identity = 53/110 (48.18%), Postives = 76/110 (69.09%), Query Frame = 3 Query: 33 RKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSSLHLKHCVQSYNVFDFLRDIVSRVPD-YSHGHSDATSEDRSISKRRKA 359 +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L + ++T R AKTM++ HLK C++ FDFL+D+V+ VPD G + D+ + RK+ Sbjct: 5 KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHMDGDKGPRRGRKS 114
BLAST of DR908821 vs. ExPASy Swiss-Prot
Match: NC2A_DICDI (Dr1-associated corepressor homolog OS=Dictyostelium discoideum GN=drap1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.467e-22 Identity = 53/123 (43.09%), Postives = 78/123 (63.41%), Query Frame = 3 Query: 30 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSSLHLKHCVQSYNVFDFLRDIVSRVPDYSHGHSDATSEDRSISKRRKAAGDECNDSDEESK 398 M+KK T+FP ARIKKIMQ DE+VGKIA A P+L+S+ LELF+ DL +T +IT + K +S HLK C++ + FDFL +IV R+PD ++ + +K G++ + +EE + Sbjct: 1 MKKKYKTKFPMARIKKIMQKDEEVGKIASATPILISQCLELFMADLVMKTCKITQAKKGKVISVNHLKECIKQESTFDFLTEIVDRIPD---------DKNEKRGRPKKTEGEDGGEEEEEEE 114
BLAST of DR908821 vs. ExPASy Swiss-Prot
Match: DPB3_SCHPO (DNA polymerase epsilon subunit C OS=Schizosaccharomyces pombe GN=dpb3 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.145e-20 Identity = 48/83 (57.83%), Postives = 61/83 (73.49%), Query Frame = 3 Query: 48 TRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSSLHLKHCVQSYNVFDFLRDIVSRVPD 296 +RFP ARIKKIMQAD+DVGK+A PV++SKALELF+Q + + + T AK ++ HLKH VQS FDFL+DIV +VPD Sbjct: 22 SRFPVARIKKIMQADQDVGKVAQVTPVIMSKALELFMQSIIQESCKQTRLHQAKRVTVSHLKHAVQSVEQFDFLQDIVEKVPD 104
BLAST of DR908821 vs. ExPASy Swiss-Prot
Match: DPB3_YARLI (DNA polymerase epsilon subunit C OS=Yarrowia lipolytica GN=DPB3 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.162e-18 Identity = 49/112 (43.75%), Postives = 68/112 (60.71%), Query Frame = 3 Query: 36 KKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSSLHLKHCVQSYNVFDFLRDIVSRVPDYSHGHSDATSEDRSISKRRKAAGDE 371 +++ TRFP ARIKK+MQ+D+D+GK+A A P V+KALELF+ L + T R +K +S HLK V FDFL+DIVS+ PD + AT E+ +R + E Sbjct: 6 REIKTRFPVARIKKLMQSDDDIGKVAQATPTAVAKALELFMISLIEETCNQARMRNSKRVSPSHLKQAVLETEQFDFLQDIVSKHPD---AVAPATGEEEQPKRRGRKPAQE 114
BLAST of DR908821 vs. ExPASy Swiss-Prot
Match: NCB1_YEAST (Negative cofactor 2 complex subunit alpha OS=Saccharomyces cerevisiae GN=BUR6 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.702e-11 Identity = 31/79 (39.24%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 39 KLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSSLHLKHCVQSYNVFDFLRD 275 ++ T FP A++KKIMQ DED+GK++ A PV+ ++LE F+ L ++ E+ +G K +++ LK + + FDFLR+ Sbjct: 48 RIKTHFPPAKVKKIMQTDEDIGKVSQATPVIAGRSLEFFIALLVKKSGEMARGQGTKRITAEILKKTILNDEKFDFLRE 126 The following BLAST results are available for this feature:
BLAST of DR908821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908821 ID=DR908821; Name=DR908821; organism=Citrus sinensis; type=EST; length=574bpback to top |