CN189604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_ORYSJ (Homogentisate 1,2-dioxygenase OS=Oryza sativa subsp. japonica GN=HGO PE=2 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 3.586e-96 Identity = 127/166 (76.51%), Postives = 143/166 (86.14%), Query Frame = 2 Query: 281 THEPFKPRVPAHGKLVSEFDKSNSYT--TPTQLRWKPVDIPDS--PTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 THEPF PR PAH +L+ +FD++ + T TPTQLRW+P D+P P DFIDGLYT+CGAGSSFLRHGYAIHMY ANKSMD CAFCNADGDFL+VPQ+G+L I TECGKL V PGEI V+PQGFRFAV LPDGPSRGY++EIFGTHFQLPDLGPIGANGLA+ RDFL Sbjct: 85 THEPFHPRRPAHPRLIGDFDRTTTDTVATPTQLRWRPADVPPHHPPLDFIDGLYTVCGAGSSFLRHGYAIHMYAANKSMDGCAFCNADGDFLIVPQQGKLLITTECGKLLVPPGEIVVIPQGFRFAVDLPDGPSRGYVSEIFGTHFQLPDLGPIGANGLASARDFL 250 HSP 2 Score: 99.7525 bits (247), Expect = 3.586e-96 Identity = 46/60 (76.67%), Postives = 50/60 (83.33%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 Y SG GNS SSEA+ G LPRGQNSPLVCP GLYAEQ+SGT FT+PR N R+WLYRIKPS Sbjct: 24 YLSGLGNSLSSEAVAGTLPRGQNSPLVCPLGLYAEQLSGTPFTAPRARNLRTWLYRIKPS 83
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_ARATH (Homogentisate 1,2-dioxygenase OS=Arabidopsis thaliana GN=HGO PE=2 SV=2) HSP 1 Score: 283.493 bits (724), Expect = 8.837e-76 Identity = 132/179 (73.74%), Postives = 148/179 (82.68%), Query Frame = 2 Query: 230 PSQAQSTQLVIQNKTFSTHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 P + + + K THEPFKPRVPAH KLVSEFD SNS T PTQLRW+P DIPDS DF+DGL+TICGAGSSFLRHG+AIHMY AN M + AFCNADGDFL+VPQ GRLWI TECG+L V+PGEIAV+PQGFRF++ LPDG SRGY+AEI+G HFQLPDLGPIGANGLAA RDFL Sbjct: 57 PRKLNQRSWLYRVKPSVTHEPFKPRVPAHKKLVSEFDASNSRTNPTQLRWRPEDIPDSEIDFVDGLFTICGAGSSFLRHGFAIHMYVANTGMKDSAFCNADGDFLLVPQTGRLWIETECGRLLVTPGEIAVIPQGFRFSIDLPDGKSRGYVAEIYGAHFQLPDLGPIGANGLAASRDFL 235 HSP 2 Score: 116.316 bits (290), Expect = 1.855e-25 Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 3 Query: 78 EDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 ++ +L Y+SGFGN FSSEAI GALP QNSPL+CP+GLYAEQISGTSFTSPRKLNQRSWLYR+KPS Sbjct: 6 KELEELKYQSGFGNHFSSEAIAGALPLDQNSPLLCPYGLYAEQISGTSFTSPRKLNQRSWLYRVKPS 72
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_BURCJ (Homogentisate 1,2-dioxygenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=hmgA PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.143e-68 Identity = 96/165 (58.18%), Postives = 121/165 (73.33%), Query Frame = 2 Query: 278 STHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 + H PF+P A +LVSEF S T P QLRW P+ +P PTDF+DGL T+ G GS+ +G AIH+Y AN+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFAV+LPDG +RGYI E FG +LPDLGPIG+NGLA PRDFL Sbjct: 73 AVHRPFEPYAGAQ-RLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFAVALPDGDARGYICENFGALLRLPDLGPIGSNGLANPRDFL 236 HSP 2 Score: 88.9669 bits (219), Expect = 5.143e-68 Identity = 39/60 (65.00%), Postives = 50/60 (83.33%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 Y SGF N F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+ Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPA 72
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_BURS3 (Homogentisate 1,2-dioxygenase OS=Burkholderia sp. (strain 383) GN=hmgA PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 5.143e-68 Identity = 94/165 (56.97%), Postives = 120/165 (72.73%), Query Frame = 2 Query: 278 STHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 + H PF+P +LVSEF S T P QLRW P+ +P PTDF+DGL T+ G GS+ +G AIH+Y AN+SM + F +ADG+ L+VPQ+GRL+IATE G++EV P EIAV+P+G RF+V+LPDG +RGYI E FG +LPDLGPIG+NGLA PRDFL Sbjct: 73 AVHRPFEPYAGPQ-RLVSEFGDSADVPPTPPDQLRWDPLPMPVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRVEVEPFEIAVIPRGVRFSVTLPDGDARGYICENFGAQLRLPDLGPIGSNGLANPRDFL 236 HSP 2 Score: 91.2781 bits (225), Expect = 5.143e-68 Identity = 39/64 (60.94%), Postives = 53/64 (82.81%), Query Frame = 3 Query: 87 SDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 ++ Y+SGF N F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+ Sbjct: 9 ANAGYQSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPA 72
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_BURCH (Homogentisate 1,2-dioxygenase OS=Burkholderia cenocepacia (strain HI2424) GN=hmgA PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.707e-68 Identity = 96/165 (58.18%), Postives = 121/165 (73.33%), Query Frame = 2 Query: 278 STHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 + H PF+P A +LVSEF S T P QLRW P+ +P PTDF+DGL T+ G GS+ +G AIH+Y AN+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFAV+LPDG +RGYI E FG +LPDLGPIG+NGLA PRDFL Sbjct: 73 AVHRPFEPYAGAQ-RLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFAVALPDGNARGYICENFGALLRLPDLGPIGSNGLANPRDFL 236 HSP 2 Score: 88.9669 bits (219), Expect = 6.707e-68 Identity = 39/60 (65.00%), Postives = 50/60 (83.33%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 Y SGF N F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+ Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPA 72
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_BURCA (Homogentisate 1,2-dioxygenase OS=Burkholderia cenocepacia (strain AU 1054) GN=hmgA PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.707e-68 Identity = 96/165 (58.18%), Postives = 121/165 (73.33%), Query Frame = 2 Query: 278 STHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 + H PF+P A +LVSEF S T P QLRW P+ +P PTDF+DGL T+ G GS+ +G AIH+Y AN+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFAV+LPDG +RGYI E FG +LPDLGPIG+NGLA PRDFL Sbjct: 73 AVHRPFEPYAGAQ-RLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFAVALPDGNARGYICENFGALLRLPDLGPIGSNGLANPRDFL 236 HSP 2 Score: 88.9669 bits (219), Expect = 6.707e-68 Identity = 39/60 (65.00%), Postives = 50/60 (83.33%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 Y SGF N F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+ Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPA 72
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_BURVG (Homogentisate 1,2-dioxygenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=hmgA PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 1.940e-67 Identity = 93/165 (56.36%), Postives = 120/165 (72.73%), Query Frame = 2 Query: 278 STHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 + H PF+P +LV+EF S T P QLRW P+ +P PTDF++GL T+ G GS+ +G AIH+Y AN+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFAV+LPDG +RGYI E FG +LPDLGPIG+NGLA PRDFL Sbjct: 73 AVHRPFEP-FTGRQRLVAEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVEGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPAEIAVIPRGVRFAVALPDGDARGYICENFGALLRLPDLGPIGSNGLANPRDFL 236 HSP 2 Score: 90.1225 bits (222), Expect = 1.940e-67 Identity = 39/60 (65.00%), Postives = 51/60 (85.00%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 Y SGFGN F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+R+WLYRI+P+ Sbjct: 13 YLSGFGNEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRAWLYRIRPA 72
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_BURA4 (Homogentisate 1,2-dioxygenase OS=Burkholderia ambifaria (strain MC40-6) GN=hmgA PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 4.301e-67 Identity = 94/165 (56.97%), Postives = 121/165 (73.33%), Query Frame = 2 Query: 278 STHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 + H PF+P V +LVSEF S T P QLRW P+ +P PTDF++GL T+ G GS+ +G AIH+Y AN+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RF+V+LPDG +RGYI E FG +LPDLGPIG+NGLA PRDFL Sbjct: 73 AVHRPFEP-VTGPQRLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVEGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFSVALPDGDARGYICENFGALLRLPDLGPIGSNGLANPRDFL 236 HSP 2 Score: 88.9669 bits (219), Expect = 4.301e-67 Identity = 39/60 (65.00%), Postives = 50/60 (83.33%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 Y SGF N F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+ Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPA 72
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_BURCC (Homogentisate 1,2-dioxygenase OS=Burkholderia cenocepacia (strain MC0-3) GN=hmgA PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 7.314e-67 Identity = 95/165 (57.58%), Postives = 120/165 (72.73%), Query Frame = 2 Query: 278 STHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 + H PF+P A +LVSEF S T P QLRW P+ + PTDF+DGL T+ G GS+ +G AIH+Y AN+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFAV+LPDG +RGYI E FG +LPDLGPIG+NGLA PRDFL Sbjct: 73 AVHRPFEPYAGAQ-RLVSEFGDSADVPPTPPNQLRWDPLPMLVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFAVALPDGDARGYICENFGALLRLPDLGPIGSNGLANPRDFL 236 HSP 2 Score: 88.9669 bits (219), Expect = 7.314e-67 Identity = 39/60 (65.00%), Postives = 50/60 (83.33%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 Y SGF N F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+ Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPA 72
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_BURM1 (Homogentisate 1,2-dioxygenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=hmgA PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.244e-66 Identity = 93/165 (56.36%), Postives = 119/165 (72.12%), Query Frame = 2 Query: 278 STHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 + H PF+P A +LVS+F S T P QLRW P+ +P PTDF++GL T+ G GS+ G AIH+Y AN+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RF V+LPDG +RGYI E FG +LPDLGPIG+NGLA PRDFL Sbjct: 73 AVHRPFEPFAGAQ-RLVSDFADSADVPPTPPNQLRWNPLPMPSEPTDFVEGLVTMAGNGSAAAMSGCAIHLYAANRSMRDRFFYSADGELLIVPQQGRLFIATELGRLDVEPFEIAVIPRGVRFTVALPDGDARGYICENFGALLRLPDLGPIGSNGLANPRDFL 236 HSP 2 Score: 88.9669 bits (219), Expect = 1.244e-66 Identity = 39/60 (65.00%), Postives = 50/60 (83.33%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 Y SGF N F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+ Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPA 72 The following BLAST results are available for this feature:
BLAST of CN189604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189604 ID=CN189604; Name=CN189604; organism=Citrus sinensis; type=EST; length=769bpback to top |