CX044506
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044506 vs. ExPASy Swiss-Prot
Match: NAM8_YEAST (Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.967e-19 Identity = 49/109 (44.95%), Postives = 62/109 (56.88%), Query Frame = -3 Query: 354 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN---------------KQAQPDPNQWNAGY 635 DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ+ DR AE A+ + G + +RLSWGRS +Q QP Q N GY Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRSAKQTALLQQAMLSNSLQVQQQQPGLQQPNYGY 417
BLAST of CX044506 vs. ExPASy Swiss-Prot
Match: YG41_SCHPO (Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 8.264e-18 Identity = 46/88 (52.27%), Postives = 57/88 (64.77%), Query Frame = -3 Query: 372 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPN 635 D N+TVFVG L V++E L+ LF +G++V+VKIP GK CGFVQF +R AE A+ L G LG IRLSWGR+ N A P N Sbjct: 299 DTANSTVFVGGLSKFVSEEELKYLFQNFGEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRN-QNPIAAPALN 385
BLAST of CX044506 vs. ExPASy Swiss-Prot
Match: NGR1_YEAST (Negative growth regulatory protein NGR1 OS=Saccharomyces cerevisiae GN=NGR1 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.559e-16 Identity = 46/100 (46.00%), Postives = 61/100 (61.00%), Query Frame = -3 Query: 336 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQG 635 DP NTTVFVG L T+ LR LF +G +++V+IP GK CGFV+F R AE +++ L G +GG IRLSWGR PS+ A+ + A Y + G Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGR-PSSSNAKTNSTIMGASQYMSSNG 454
BLAST of CX044506 vs. ExPASy Swiss-Prot
Match: CSX1_SCHPO (RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15 Identity = 35/77 (45.45%), Postives = 57/77 (74.03%), Query Frame = -3 Query: 405 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 635 DP NTTVFVG L S ++++ L+ F +G+++++KIP GK CGFVQ++++S AE+A+ + G +G +IRL+WG + Sbjct: 293 DPLNTTVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGHN 369 The following BLAST results are available for this feature:
BLAST of CX044506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX044506 ID=CX044506; Name=CX044506; organism=Citrus sinensis; type=EST; length=658bpback to top |